Protein TRANSPARENT TESTA GLABRA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24520 AT5G24520 AT5G24520 AT5G24520 |
| fragaria_vesca | FvH4_7g32970 FvH4_7g32970 |
| malus_domestica | MD01G1228700.v1.1 MD07G1299800.v1.1 |
| prunus_persica | Prupe.2G319500_v2.0.a1 Prupe.2G319500_v2.0.a1 Prupe.2G319500_v2.0.a1 |
| pyrus_communis | pycom01g23670 pycom07g27200 |
| rosa_chinensis | RchiOBHm_Chr1g0382931 |
| rosa_laevigata | RLG00000008438 RLG00000026148 |
| rosa_multiflora | Rmu_co8253715.1_g000001 Rmu_sc0000698.1_g000059 Rmu_sc0018693.1_g000001 Rmu_sc0018693.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00277770 |
| rosa_rugosa | Rorug01G0437200 |
| rosa_samantha | Rh1AG462700 Rh1BG419600 Rh1DG451600 Rh5AG038100 |
| rosa_wichuraiana | Rw1G040930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 344 |
| AatII | GACGTC | 1 cut(s) | 416 |
| AccB1I | GGYRCC | 1 cut(s) | 823 |
| AccBSI | CCGCTC | 1 cut(s) | 70 |
| AccI | GTMKAC | 2 cut(s) | 162, 348 |
| AccII | CGCG | 1 cut(s) | 404 |
| AclWI | GGATC | 1 cut(s) | 911 |
| AcoI | YGGCCR | 1 cut(s) | 936 |
| AcyI | GRCGYC | 3 cut(s) | 413, 501, 824 |
| AfaI | GTAC | 3 cut(s) | 478, 707, 932 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 34, 325, 328, 591, 675 |
| AgsI | TTSAA | 1 cut(s) | 1024 |
| AjnI | CCWGG | 1 cut(s) | 683 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 236, 268 |
| AluBI | AGCT | 8 cut(s) | 135, 247, 517, 563, 784, 886, 958, 1018 |
| AluI | AGCT | 8 cut(s) | 135, 247, 517, 563, 784, 886, 958, 1018 |
| Alw26I | GTCTC | 2 cut(s) | 503, 586 |
| AlwI | GGATC | 1 cut(s) | 911 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 700 |
| Ama87I | CYCGRG | 1 cut(s) | 356 |
| AoxI | GGCC | 5 cut(s) | 31, 201, 681, 902, 936 |
| ApeKI | GCWGC | 7 cut(s) | 132, 514, 886, 958, 971, 976, 1015 |
| AseI | ATTAAT | 1 cut(s) | 951 |
| AspLEI | GCGC | 6 cut(s) | 404, 406, 826, 874, 944, 976 |
| AspS9I | GGNCC | 3 cut(s) | 32, 697, 902 |
| AsuC2I | CCSGG | 4 cut(s) | 35, 158, 182, 442 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 610 |
| AvaI | CYCGRG | 1 cut(s) | 356 |
| AvaII | GGWCC | 1 cut(s) | 697 |
| AxyI | CCTNAGG | 1 cut(s) | 701 |
| BanI | GGYRCC | 1 cut(s) | 823 |
| BanII | GRGCYC | 2 cut(s) | 363, 441 |
| BbvCI | CCTCAGC | 1 cut(s) | 654 |
| BbvI | GCAGC | 7 cut(s) | 144, 526, 873, 945, 983, 988, 1027 |
| BccI | CCATC | 2 cut(s) | 371, 718 |
| BceAI | ACGGC | 1 cut(s) | 110 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 109, 121, 143, 155, 721, 755 |
| BciT130I | CCWGG | 1 cut(s) | 685 |
| BcnI | CCSGG | 4 cut(s) | 35, 158, 182, 442 |
| BcoDI | GTCTC | 2 cut(s) | 503, 586 |
| BfaI | CTAG | 2 cut(s) | 564, 837 |
| BfmI | CTRYAG | 2 cut(s) | 959, 969 |
| BfoI | RGCGCY | 2 cut(s) | 827, 875 |
| BisI | GCNGC | 9 cut(s) | 133, 407, 515, 827, 887, 959, 972, 977, 1016 |
| BlsI | GCNGC | 9 cut(s) | 134, 408, 516, 828, 888, 960, 973, 978, 1017 |
| Bme1390I | CCNGG | 5 cut(s) | 35, 158, 182, 442, 685 |
| Bme18I | GGWCC | 1 cut(s) | 697 |
| BmeT110I | CYCGRG | 1 cut(s) | 356 |
| BmgT120I | GGNCC | 3 cut(s) | 32, 697, 902 |
| BmiI | GGNNCC | 3 cut(s) | 454, 825, 903 |
| BmrFI | CCNGG | 5 cut(s) | 35, 158, 182, 442, 685 |
| BmsI | GCATC | 4 cut(s) | 129, 471, 759, 1002 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 134, 166, 350, 382 |
| BpmI | CTGGAG | 2 cut(s) | 442, 806 |
| Bpu10I | CCTNAGC | 1 cut(s) | 654 |
| BpuMI | CCSGG | 4 cut(s) | 35, 158, 182, 442 |
| BsaHI | GRCGYC | 3 cut(s) | 413, 501, 824 |
| BsaJI | CCNNGG | 3 cut(s) | 28, 78, 440 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 155, 185, 254, 284 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 34, 325, 328, 591, 675 |
| Bse118I | RCCGGY | 2 cut(s) | 772, 938 |
| Bse1I | ACTGG | 1 cut(s) | 428 |
| Bse21I | CCTNAGG | 1 cut(s) | 701 |
| Bse3DI | GCAATG | 2 cut(s) | 546, 993 |
| BseBI | CCWGG | 1 cut(s) | 685 |
| BseDI | CCNNGG | 3 cut(s) | 28, 78, 440 |
| BseGI | GGATG | 2 cut(s) | 291, 865 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 34, 325, 328, 591, 675 |
| BseMI | GCAATG | 2 cut(s) | 546, 993 |
| BseMII | CTCAG | 3 cut(s) | 605, 668, 692 |
| BseNI | ACTGG | 1 cut(s) | 428 |
| BsePI | GCGCGC | 1 cut(s) | 402 |
| BseRI | GAGGAG | 3 cut(s) | 158, 292, 331 |
| BseX3I | CGGCCG | 1 cut(s) | 936 |
| BseXI | GCAGC | 7 cut(s) | 144, 526, 873, 945, 983, 988, 1027 |
| BseYI | CCCAGC | 1 cut(s) | 854 |
| Bsh1236I | CGCG | 1 cut(s) | 404 |
| Bsh1285I | CGRYCG | 3 cut(s) | 352, 761, 939 |
| BshFI | GGCC | 5 cut(s) | 33, 203, 683, 904, 938 |
| BshNI | GGYRCC | 1 cut(s) | 823 |
| BsiEI | CGRYCG | 3 cut(s) | 352, 761, 939 |
| BsiHKCI | CYCGRG | 1 cut(s) | 356 |
| BslFI | GGGAC | 2 cut(s) | 500, 632 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 34, 325, 328, 591, 675 |
| BsmAI | GTCTC | 2 cut(s) | 503, 586 |
| BsmBI | CGTCTC | 2 cut(s) | 503, 586 |
| BsmFI | GGGAC | 2 cut(s) | 500, 632 |
| BsmI | GAATGC | 2 cut(s) | 628, 814 |
| BsnI | GGCC | 5 cut(s) | 33, 203, 683, 904, 938 |
| BsoBI | CYCGRG | 1 cut(s) | 356 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 441 |
| Bsp143I | GATC | 4 cut(s) | 432, 610, 758, 916 |
| Bsp19I | CCATGG | 1 cut(s) | 78 |
| BspANI | GGCC | 5 cut(s) | 33, 203, 683, 904, 938 |
| BspCNI | CTCAG | 3 cut(s) | 606, 667, 693 |
| BspFNI | CGCG | 1 cut(s) | 404 |
| BspLI | GGNNCC | 3 cut(s) | 454, 825, 903 |
| BspMAI | CTGCAG | 2 cut(s) | 963, 973 |
| BspPI | GGATC | 1 cut(s) | 911 |
| BspT107I | GGYRCC | 1 cut(s) | 823 |
| BsrBI | CCGCTC | 1 cut(s) | 70 |
| BsrDI | GCAATG | 2 cut(s) | 546, 993 |
| BsrFI | RCCGGY | 2 cut(s) | 772, 938 |
| BsrI | ACTGG | 1 cut(s) | 428 |
| BssAI | RCCGGY | 2 cut(s) | 772, 938 |
| BssECI | CCNNGG | 3 cut(s) | 28, 78, 440 |
| BssHII | GCGCGC | 1 cut(s) | 402 |
| BssMI | GATC | 4 cut(s) | 432, 610, 758, 916 |
| BssNI | GRCGYC | 3 cut(s) | 413, 501, 824 |
| BssT1I | CCWWGG | 1 cut(s) | 78 |
| Bst2UI | CCWGG | 1 cut(s) | 685 |
| Bst4CI | ACNGT | 1 cut(s) | 895 |
| BstACI | GRCGYC | 3 cut(s) | 413, 501, 824 |
| BstC8I | GCNNGC | 4 cut(s) | 404, 681, 870, 940 |
| BstDEI | CTNAG | 3 cut(s) | 614, 654, 701 |
| BstDSI | CCRYGG | 1 cut(s) | 78 |
| BstEII | GGTNACC | 1 cut(s) | 46 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 326 |
| BstF5I | GGATG | 2 cut(s) | 291, 865 |
| BstFNI | CGCG | 1 cut(s) | 404 |
| BstH2I | RGCGCY | 2 cut(s) | 827, 875 |
| BstHHI | GCGC | 6 cut(s) | 404, 406, 826, 874, 944, 976 |
| BstKTI | GATC | 4 cut(s) | 435, 613, 761, 919 |
| BstMAI | GTCTC | 2 cut(s) | 503, 586 |
| BstMBI | GATC | 4 cut(s) | 432, 610, 758, 916 |
| BstMCI | CGRYCG | 3 cut(s) | 352, 761, 939 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 399, 664, 769, 790 |
| BstNI | CCWGG | 1 cut(s) | 685 |
| BstPI | GGTNACC | 1 cut(s) | 46 |
| BstSCI | CCNGG | 5 cut(s) | 33, 156, 180, 440, 683 |
| BstSFI | CTRYAG | 2 cut(s) | 959, 969 |
| BstUI | CGCG | 1 cut(s) | 404 |
| BstV1I | GCAGC | 7 cut(s) | 144, 526, 873, 945, 983, 988, 1027 |
| BstZI | CGGCCG | 1 cut(s) | 936 |
| Bsu36I | CCTNAGG | 1 cut(s) | 701 |
| BsuRI | GGCC | 5 cut(s) | 33, 203, 683, 904, 938 |
| BtgI | CCRYGG | 1 cut(s) | 78 |
| BtgZI | GCGATG | 2 cut(s) | 106, 505 |
| BtsCI | GGATG | 2 cut(s) | 291, 865 |
| BtsI | GCAGTG | 1 cut(s) | 968 |
| BtsIMutI | CAGTG | 1 cut(s) | 968 |
| Cac8I | GCNNGC | 4 cut(s) | 404, 681, 870, 940 |
| CaiI | CAGNNNCTG | 1 cut(s) | 700 |
| CfoI | GCGC | 6 cut(s) | 404, 406, 826, 874, 944, 976 |
| Cfr10I | RCCGGY | 2 cut(s) | 772, 938 |
| Cfr13I | GGNCC | 3 cut(s) | 32, 697, 902 |
| CseI | GACGC | 2 cut(s) | 490, 520 |
| Csp6I | GTAC | 3 cut(s) | 477, 706, 931 |
| CviAII | CATG | 3 cut(s) | 79, 250, 709 |
| CviQI | GTAC | 3 cut(s) | 477, 706, 931 |
| DdeI | CTNAG | 3 cut(s) | 614, 654, 701 |
| DinI | GGCGCC | 1 cut(s) | 825 |
| DpnI | GATC | 4 cut(s) | 434, 612, 760, 918 |
| DpnII | GATC | 4 cut(s) | 432, 610, 758, 916 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 344 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 344 |
| EaeI | YGGCCR | 1 cut(s) | 936 |
| EagI | CGGCCG | 1 cut(s) | 936 |
| EciI | GGCGGA | 3 cut(s) | 308, 574, 794 |
| EclXI | CGGCCG | 1 cut(s) | 936 |
| Eco130I | CCWWGG | 1 cut(s) | 78 |
| Eco24I | GRGCYC | 2 cut(s) | 363, 441 |
| Eco47I | GGWCC | 1 cut(s) | 697 |
| Eco52I | CGGCCG | 1 cut(s) | 936 |
| Eco81I | CCTNAGG | 1 cut(s) | 701 |
| Eco88I | CYCGRG | 1 cut(s) | 356 |
| Eco91I | GGTNACC | 1 cut(s) | 46 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 326 |
| EcoO109I | RGGNCCY | 2 cut(s) | 697, 902 |
| EcoO65I | GGTNACC | 1 cut(s) | 46 |
| EcoRII | CCWGG | 1 cut(s) | 683 |
| EcoT14I | CCWWGG | 1 cut(s) | 78 |
| EcoT38I | GRGCYC | 2 cut(s) | 363, 441 |
| EgeI | GGCGCC | 1 cut(s) | 825 |
| EheI | GGCGCC | 1 cut(s) | 825 |
| ErhI | CCWWGG | 1 cut(s) | 78 |
| Esp3I | CGTCTC | 2 cut(s) | 503, 586 |
| FaeI | CATG | 3 cut(s) | 82, 253, 712 |
| FaiI | YATR | 6 cut(s) | 80, 251, 641, 643, 710, 843 |
| FaqI | GGGAC | 2 cut(s) | 500, 632 |
| FatI | CATG | 3 cut(s) | 78, 249, 708 |
| FauI | CCCGC | 4 cut(s) | 75, 110, 125, 892 |
| FblI | GTMKAC | 2 cut(s) | 162, 348 |
| Fnu4HI | GCNGC | 9 cut(s) | 133, 407, 515, 827, 887, 959, 972, 977, 1016 |
| FokI | GGATG | 2 cut(s) | 278, 872 |
| FriOI | GRGCYC | 2 cut(s) | 363, 441 |
| Fsp4HI | GCNGC | 9 cut(s) | 133, 407, 515, 827, 887, 959, 972, 977, 1016 |
| FspBI | CTAG | 2 cut(s) | 564, 837 |
| GlaI | GCGC | 6 cut(s) | 403, 405, 825, 873, 943, 975 |
| GluI | GCNGC | 9 cut(s) | 133, 407, 515, 827, 887, 959, 972, 977, 1016 |
| GsaI | CCCAGC | 1 cut(s) | 858 |
| GsuI | CTGGAG | 2 cut(s) | 442, 806 |
| HaeII | RGCGCY | 2 cut(s) | 827, 875 |
| HaeIII | GGCC | 5 cut(s) | 33, 203, 683, 904, 938 |
| HgaI | GACGC | 2 cut(s) | 490, 520 |
| HhaI | GCGC | 6 cut(s) | 404, 406, 826, 874, 944, 976 |
| Hin1I | GRCGYC | 3 cut(s) | 413, 501, 824 |
| Hin1II | CATG | 3 cut(s) | 82, 253, 712 |
| Hin6I | GCGC | 6 cut(s) | 402, 404, 824, 872, 942, 974 |
| HinP1I | GCGC | 6 cut(s) | 402, 404, 824, 872, 942, 974 |
| HincII | GTYRAC | 2 cut(s) | 163, 349 |
| HindII | GTYRAC | 2 cut(s) | 163, 349 |
| HinfI | GANTC | 7 cut(s) | 20, 56, 338, 447, 649, 718, 863 |
| HphI | GGTGA | 2 cut(s) | 40, 610 |
| Hpy166II | GTNNAC | 3 cut(s) | 163, 349, 541 |
| Hpy188I | TCNGA | 3 cut(s) | 452, 615, 723 |
| Hpy188III | TCNNGA | 4 cut(s) | 493, 508, 527, 742 |
| Hpy8I | GTNNAC | 3 cut(s) | 163, 349, 541 |
| Hpy99I | CGWCG | 8 cut(s) | 131, 350, 506, 509, 593, 718, 769, 895 |
| HpyAV | CCTTC | 5 cut(s) | 184, 219, 229, 490, 1018 |
| HpyCH4III | ACNGT | 1 cut(s) | 895 |
| HpyCH4IV | ACGT | 1 cut(s) | 413 |
| HpyCH4V | TGCA | 4 cut(s) | 812, 961, 971, 1015 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 399, 664, 769, 790 |
| HpyF3I | CTNAG | 3 cut(s) | 614, 654, 701 |
| HpySE526I | ACGT | 1 cut(s) | 413 |
| Hsp92I | GRCGYC | 3 cut(s) | 413, 501, 824 |
| Hsp92II | CATG | 3 cut(s) | 82, 253, 712 |
| HspAI | GCGC | 6 cut(s) | 402, 404, 824, 872, 942, 974 |
| KasI | GGCGCC | 1 cut(s) | 823 |
| KroI | GCCGGC | 1 cut(s) | 938 |
| KroNI | GCCGGC | 1 cut(s) | 940 |
| Kzo9I | GATC | 4 cut(s) | 432, 610, 758, 916 |
| LmnI | GCTCC | 4 cut(s) | 625, 678, 781, 883 |
| Lsp1109I | GCAGC | 7 cut(s) | 144, 526, 873, 945, 983, 988, 1027 |
| LweI | GCATC | 4 cut(s) | 129, 471, 759, 1002 |
| MaeI | CTAG | 2 cut(s) | 564, 837 |
| MaeII | ACGT | 1 cut(s) | 413 |
| MaeIII | GTNAC | 1 cut(s) | 46 |
| MalI | GATC | 4 cut(s) | 434, 612, 760, 918 |
| MbiI | CCGCTC | 1 cut(s) | 70 |
| MboI | GATC | 4 cut(s) | 432, 610, 758, 916 |
| MfeI | CAATTG | 1 cut(s) | 813 |
| MhlI | GDGCHC | 2 cut(s) | 363, 441 |
| MluCI | AATT | 1 cut(s) | 813 |
| Mly113I | GGCGCC | 1 cut(s) | 824 |
| MlyI | GAGTC | 4 cut(s) | 50, 332, 658, 857 |
| MmeI | TCCRAC | 2 cut(s) | 177, 309 |
| MroNI | GCCGGC | 1 cut(s) | 938 |
| MseI | TTAA | 1 cut(s) | 951 |
| MspA1I | CMGCKG | 3 cut(s) | 409, 958, 1018 |
| MspR9I | CCNGG | 5 cut(s) | 35, 158, 182, 442, 685 |
| MunI | CAATTG | 1 cut(s) | 813 |
| Mva1269I | GAATGC | 2 cut(s) | 628, 814 |
| MvaI | CCWGG | 1 cut(s) | 685 |
| MvnI | CGCG | 1 cut(s) | 404 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 399, 664, 769, 790 |
| NaeI | GCCGGC | 1 cut(s) | 940 |
| NarI | GGCGCC | 1 cut(s) | 824 |
| NciI | CCSGG | 4 cut(s) | 35, 158, 182, 442 |
| NcoI | CCATGG | 1 cut(s) | 78 |
| NdeII | GATC | 4 cut(s) | 432, 610, 758, 916 |
| NgoMIV | GCCGGC | 1 cut(s) | 938 |
| NlaIII | CATG | 3 cut(s) | 82, 253, 712 |
| NlaIV | GGNNCC | 3 cut(s) | 454, 825, 903 |
| NmeAIII | GCCGAG | 2 cut(s) | 9, 914 |
| NmuCI | GTSAC | 1 cut(s) | 46 |
| PaeR7I | CTCGAG | 1 cut(s) | 356 |
| PauI | GCGCGC | 1 cut(s) | 402 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 354, 426, 498 |
| PctI | GAATGC | 2 cut(s) | 628, 814 |
| PdiI | GCCGGC | 1 cut(s) | 940 |
| PfeI | GAWTC | 3 cut(s) | 20, 447, 718 |
| PkrI | GCNGC | 9 cut(s) | 134, 408, 516, 828, 888, 960, 973, 978, 1017 |
| Ple19I | CGATCG | 1 cut(s) | 761 |
| PleI | GAGTC | 4 cut(s) | 50, 332, 657, 857 |
| PluTI | GGCGCC | 1 cut(s) | 827 |
| PpsI | GAGTC | 4 cut(s) | 50, 332, 657, 857 |
| PpuMI | RGGWCCY | 1 cut(s) | 697 |
| PshBI | ATTAAT | 1 cut(s) | 951 |
| Psp5II | RGGWCCY | 1 cut(s) | 697 |
| Psp6I | CCWGG | 1 cut(s) | 683 |
| PspEI | GGTNACC | 1 cut(s) | 46 |
| PspFI | CCCAGC | 1 cut(s) | 854 |
| PspGI | CCWGG | 1 cut(s) | 683 |
| PspN4I | GGNNCC | 3 cut(s) | 454, 825, 903 |
| PspPI | GGNCC | 3 cut(s) | 32, 697, 902 |
| PspPPI | RGGWCCY | 1 cut(s) | 697 |
| PspXI | VCTCGAGB | 1 cut(s) | 356 |
| PstI | CTGCAG | 2 cut(s) | 963, 973 |
| PstNI | CAGNNNCTG | 1 cut(s) | 700 |
| PteI | GCGCGC | 1 cut(s) | 402 |
| PvuI | CGATCG | 1 cut(s) | 761 |
| PvuII | CAGCTG | 2 cut(s) | 958, 1018 |
| RsaI | GTAC | 3 cut(s) | 478, 707, 932 |
| RsaNI | GTAC | 3 cut(s) | 477, 706, 931 |
| SalI | GTCGAC | 2 cut(s) | 161, 347 |
| SaqAI | TTAA | 1 cut(s) | 951 |
| SatI | GCNGC | 9 cut(s) | 133, 407, 515, 827, 887, 959, 972, 977, 1016 |
| Sau3AI | GATC | 4 cut(s) | 432, 610, 758, 916 |
| Sau96I | GGNCC | 3 cut(s) | 32, 697, 902 |
| SchI | GAGTC | 4 cut(s) | 50, 332, 658, 857 |
| ScrFI | CCNGG | 5 cut(s) | 35, 158, 182, 442, 685 |
| SduI | GDGCHC | 2 cut(s) | 363, 441 |
| SfaNI | GCATC | 4 cut(s) | 129, 471, 759, 1002 |
| SfcI | CTRYAG | 2 cut(s) | 959, 969 |
| SfoI | GGCGCC | 1 cut(s) | 825 |
| Sfr274I | CTCGAG | 1 cut(s) | 356 |
| SinI | GGWCC | 1 cut(s) | 697 |
| SlaI | CTCGAG | 1 cut(s) | 356 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 1 cut(s) | 813 |
| SspDI | GGCGCC | 1 cut(s) | 823 |
| SspMI | CTAG | 2 cut(s) | 564, 837 |
| StyD4I | CCNGG | 5 cut(s) | 33, 156, 180, 440, 683 |
| StyI | CCWWGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 895 |
| TaiI | ACGT | 1 cut(s) | 416 |
| TaqII | GACCGA | 1 cut(s) | 34 |
| TasI | AATT | 1 cut(s) | 813 |
| TatI | WGTACW | 1 cut(s) | 930 |
| TauI | GCSGC | 2 cut(s) | 409, 829 |
| TfiI | GAWTC | 3 cut(s) | 20, 447, 718 |
| Tru1I | TTAA | 1 cut(s) | 951 |
| Tru9I | TTAA | 1 cut(s) | 951 |
| TscAI | CASTG | 1 cut(s) | 968 |
| TseFI | GTSAC | 1 cut(s) | 46 |
| TseI | GCWGC | 7 cut(s) | 132, 514, 886, 958, 971, 976, 1015 |
| Tsp45I | GTSAC | 1 cut(s) | 46 |
| TspDTI | ATGAA | 1 cut(s) | 127 |
| TspGWI | ACGGA | 3 cut(s) | 334, 358, 568 |
| TspRI | CASTG | 1 cut(s) | 968 |
| VpaK11BI | GGWCC | 1 cut(s) | 697 |
| VspI | ATTAAT | 1 cut(s) | 951 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 326 |
| XhoI | CTCGAG | 1 cut(s) | 356 |
| XmiI | GTMKAC | 2 cut(s) | 162, 348 |
| XspI | CTAG | 2 cut(s) | 564, 837 |
| ZraI | GACGTC | 1 cut(s) | 414 |