Protein TRANSPARENT TESTA GLABRA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24520 AT5G24520 AT5G24520 AT5G24520 |
| fragaria_vesca | FvH4_7g32970 FvH4_7g32970 |
| malus_domestica | MD01G1228700.v1.1 MD07G1299800.v1.1 |
| prunus_persica | Prupe.2G319500_v2.0.a1 Prupe.2G319500_v2.0.a1 Prupe.2G319500_v2.0.a1 |
| pyrus_communis | pycom01g23670 pycom07g27200 |
| rosa_chinensis | RchiOBHm_Chr1g0382931 |
| rosa_laevigata | RLG00000008438 RLG00000026148 |
| rosa_multiflora | Rmu_co8253715.1_g000001 Rmu_sc0000698.1_g000059 Rmu_sc0018693.1_g000001 Rmu_sc0018693.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00277770 |
| rosa_rugosa | Rorug01G0437200 |
| rosa_samantha | Rh1AG462700 Rh1BG419600 Rh1DG451600 Rh5AG038100 |
| rosa_wichuraiana | Rw1G040930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 194 |
| AciI | CCGC | 3 cut(s) | 97, 130, 185 |
| AcuI | CTGAAG | 1 cut(s) | 6 |
| AcyI | GRCGYC | 1 cut(s) | 191 |
| AfaI | GTAC | 1 cut(s) | 254 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 103, 106 |
| AluBI | AGCT | 1 cut(s) | 293 |
| AluI | AGCT | 1 cut(s) | 293 |
| Alw26I | GTCTC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 290 |
| AspLEI | GCGC | 1 cut(s) | 184 |
| BauI | CACGAG | 1 cut(s) | 56 |
| BbsI | GAAGAC | 2 cut(s) | 12, 272 |
| BbvI | GCAGC | 1 cut(s) | 302 |
| BccI | CCATC | 1 cut(s) | 149 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 161, 195 |
| BcoDI | GTCTC | 1 cut(s) | 279 |
| BisI | GCNGC | 2 cut(s) | 185, 291 |
| BlsI | GCNGC | 2 cut(s) | 186, 292 |
| BmiI | GGNNCC | 1 cut(s) | 232 |
| BpiI | GAAGAC | 2 cut(s) | 12, 272 |
| BpuEI | CTTGAG | 1 cut(s) | 119 |
| BsaHI | GRCGYC | 1 cut(s) | 191 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 32, 62 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 103, 106 |
| Bse1I | ACTGG | 1 cut(s) | 206 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 103, 106 |
| BseNI | ACTGG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 2 cut(s) | 70, 109 |
| BseXI | GCAGC | 1 cut(s) | 302 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BslFI | GGGAC | 1 cut(s) | 276 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 103, 106 |
| BsmAI | GTCTC | 1 cut(s) | 279 |
| BsmBI | CGTCTC | 1 cut(s) | 279 |
| BsmFI | GGGAC | 1 cut(s) | 276 |
| Bsp143I | GATC | 2 cut(s) | 210, 295 |
| BspACI | CCGC | 3 cut(s) | 97, 130, 185 |
| BspLI | GGNNCC | 1 cut(s) | 232 |
| BsrI | ACTGG | 1 cut(s) | 206 |
| BssMI | GATC | 2 cut(s) | 210, 295 |
| BssNI | GRCGYC | 1 cut(s) | 191 |
| BssSI | CACGAG | 1 cut(s) | 56 |
| Bst2BI | CACGAG | 1 cut(s) | 56 |
| BstACI | GRCGYC | 1 cut(s) | 191 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 104 |
| BstHHI | GCGC | 1 cut(s) | 184 |
| BstKTI | GATC | 2 cut(s) | 213, 298 |
| BstMAI | GTCTC | 1 cut(s) | 279 |
| BstMBI | GATC | 2 cut(s) | 210, 295 |
| BstV1I | GCAGC | 1 cut(s) | 302 |
| BstV2I | GAAGAC | 2 cut(s) | 12, 272 |
| CfoI | GCGC | 1 cut(s) | 184 |
| CseI | GACGC | 1 cut(s) | 296 |
| Csp6I | GTAC | 1 cut(s) | 253 |
| CviJI | RGCY | 2 cut(s) | 217, 293 |
| CviKI_1 | RGCY | 2 cut(s) | 217, 293 |
| CviQI | GTAC | 1 cut(s) | 253 |
| DpnI | GATC | 2 cut(s) | 212, 297 |
| DpnII | GATC | 2 cut(s) | 210, 295 |
| EciI | GGCGGA | 1 cut(s) | 86 |
| Eco57I | CTGAAG | 1 cut(s) | 6 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 104 |
| Esp3I | CGTCTC | 1 cut(s) | 279 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 264, 296 |
| FaqI | GGGAC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 2 cut(s) | 185, 291 |
| Fsp4HI | GCNGC | 2 cut(s) | 185, 291 |
| GlaI | GCGC | 1 cut(s) | 183 |
| GluI | GCNGC | 2 cut(s) | 185, 291 |
| HapII | CCGG | 1 cut(s) | 84 |
| HgaI | GACGC | 1 cut(s) | 296 |
| HhaI | GCGC | 1 cut(s) | 184 |
| Hin1I | GRCGYC | 1 cut(s) | 191 |
| Hin6I | GCGC | 1 cut(s) | 182 |
| HinP1I | GCGC | 1 cut(s) | 182 |
| HincII | GTYRAC | 1 cut(s) | 127 |
| HindII | GTYRAC | 1 cut(s) | 127 |
| HinfI | GANTC | 5 cut(s) | 47, 59, 116, 225, 277 |
| HpaII | CCGG | 1 cut(s) | 84 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 230 |
| Hpy188III | TCNNGA | 3 cut(s) | 269, 284, 303 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| Hpy99I | CGWCG | 1 cut(s) | 225 |
| HpyAV | CCTTC | 1 cut(s) | 266 |
| HpyCH4IV | ACGT | 1 cut(s) | 191 |
| HpySE526I | ACGT | 1 cut(s) | 191 |
| Hsp92I | GRCGYC | 1 cut(s) | 191 |
| HspAI | GCGC | 1 cut(s) | 182 |
| Kzo9I | GATC | 2 cut(s) | 210, 295 |
| LpnPI | CCDG | 5 cut(s) | 88, 97, 181, 187, 263 |
| Lsp1109I | GCAGC | 1 cut(s) | 302 |
| MaeII | ACGT | 1 cut(s) | 191 |
| MalI | GATC | 2 cut(s) | 212, 297 |
| MboI | GATC | 2 cut(s) | 210, 295 |
| MboII | GAAGA | 3 cut(s) | 12, 25, 272 |
| MlyI | GAGTC | 4 cut(s) | 41, 68, 110, 286 |
| MmeI | TCCRAC | 2 cut(s) | 69, 87 |
| MspA1I | CMGCKG | 2 cut(s) | 187, 293 |
| MspI | CCGG | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 210, 295 |
| NlaIV | GGNNCC | 1 cut(s) | 232 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 63, 204 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 2 cut(s) | 186, 292 |
| PleI | GAGTC | 4 cut(s) | 41, 67, 110, 285 |
| PpsI | GAGTC | 4 cut(s) | 41, 67, 110, 285 |
| PspN4I | GGNNCC | 1 cut(s) | 232 |
| PvuII | CAGCTG | 1 cut(s) | 293 |
| RsaI | GTAC | 1 cut(s) | 254 |
| RsaNI | GTAC | 1 cut(s) | 253 |
| SatI | GCNGC | 2 cut(s) | 185, 291 |
| Sau3AI | GATC | 2 cut(s) | 210, 295 |
| SchI | GAGTC | 4 cut(s) | 41, 68, 110, 286 |
| SetI | ASST | 6 cut(s) | 96, 111, 194, 236, 252, 295 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| SsiI | CCGC | 3 cut(s) | 97, 130, 185 |
| TaiI | ACGT | 1 cut(s) | 194 |
| TaqI | TCGA | 6 cut(s) | 198, 213, 220, 241, 268, 283 |
| TauI | GCSGC | 1 cut(s) | 187 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| TseI | GCWGC | 1 cut(s) | 290 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 112, 136 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 104 |
| ZraI | GACGTC | 1 cut(s) | 192 |