Rmu_sc0020720.1_g000001

50S ribosomal protein L3-2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020720.1
OG0012310
Physical Location & Seq
Reverse (-)
658 .. 7211
6554 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020720.1_g000001.1.cds

Sequence Viewer

Length: 2139 bp
atgtcaaactcaggtcaggaaattgttggcccaggtcctgttctttgggccggcgcacaagtctggaggcagaggttgggttgggcagggcgcggagccgcaggtcgtcggagttatgcgtgtggggctgggatcggtcggcggctgggaggacaggccggtctggctggtgtgggatcgagtgctgctgggattttcttcgtcctctgtctgatttgcagatgggactctggtgctgcaggcggtggaggattcgaggtcgagatcgggtttcaagtgcagcgcctatcagaggggatcggtttgggtgacttgcggccggtgaggtggacggggaagaactgggtagatcgaggctgggcagcaaggtctccggcgtgcagggcttcgagaagggcaagtacgtacttggttgttgaagatgcttttgcaaaggaaattagttgctttcattgggtgatgcttcgctggcccagctttgataagcttatgcccgttaaagaatttactgatgcctcgattggacatctcattgaagacacctgcgtgcttggagctgagaaccattcaatgctggagaccagaaatggcggatacagatctatcacatgggatatgacaagaggaaatggtactcatctttctatttacttggcattggctgattggaatccaattccttctgtgtccaaagtatttgtagcgtttacccttcgcctcgtagatcatgaaaagcatgccaagcataagtcttggacaggtgaacatggtttcactgccaagtcgtcgtcgtggggcaaagctcagttcattagtctaagcatgcaagtaattctggaggcagagaagatagtatcgaaaaaccaaaccgatgcaagccggtaccgagagactattgggaatgattgtacgacaagtcgcttattaaaattaattgacccacgtgtcgagatcaagtcgagggagcacggtggactacaacacagagaaacacaatacccatcactctctctcaccaagctcttccctaaagtcctaaaccctactctgcaacctgtgttggggtttccacatccgccatgccatcaaacccgtcgtcgttttaagcctccgtctccgtctccgtctccgtcacccacatccgccatgtccgccttatcgagaggcctcattgcccgcctccgcctcctctccctcaacccggccacttcttcttcttcctcctcttctacttgtaccgctatacccgccgctcacgctacgacgacgtcgtattctcatttcttccgatgcttcagctccgaggccttggtggacggggccgagatcgccgaagatcgcagccgggttatcgaggccaggcccggagttatgaccccccaatcgaagcggaccggagtcatcgccgtcaagtgtggcatgtcggcgcgctgggacaaatggggtgctagggttccgatcaccgtgctttgggtcgatgataatatcgtctctcaggtcaaaaccccagagaaagaaggaatctctgccctacagattgggtgcgggcagaaaaaagcaaaacatctgacaaagcctgaagtgggccatttcagagctcagggtgttccacttaagaggaaactgcgggagtttccggtaacagaagatgcgcttctccctgttggtatgtcaatcggtgttcgccattttgttccaggccaatatgttgatgttacaggaatcacgagagggaaaggttttcagggtgggatgaaaaggtatggttttagaggaatgccagcaagtcatggtgcttctaagtcacaccgaagtattggttctacaggtcagagagatgatgctggaagggtctttaaaggcagaaagatgcccgggcgcatgggtggaaaacagagaacggtgaaaaatgtatggatctacaaaattgatcccgcaaggaacttgatatgggtgagaggccaggtcccaggtgctgaagggaactttgtgtttatcaaggatgctttctacaagaaacccgatgtctcgatgctaccatttccaacttactttgctccagaggatgaagatccaagcaagttagaaccgctggttgctgatcttggagaagtagatccatttatggcggcagattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Ribosomal_L3

Protein Analysis

712

Amino Acids

77.93

Weight (kDa)

9.84

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012310)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17465
fragaria_vesca FvH4_4g21510
malus_domestica MD13G1139500.v1.1 MD16G1136200.v1.1
prunus_persica Prupe.1G105200_v2.0.a1
pyrus_communis pycom13g12130 pycom16g11980
rosa_chinensis RchiOBHm_Chr4g0427531
rosa_laevigata RLG00000007230
rosa_multiflora Rmu_sc0009627.1_g000003 Rmu_sc0020720.1_g000001
rosa_roxburghii Rroxscaffold_5G00369170
rosa_rugosa Rorug04G0218400 Rorug04G0218400
rosa_samantha Rh4AG274900 Rh4BG280700 Rh4CG296000 Rh4DG278100
rosa_wichuraiana Rw4G023830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 551
AasI GACNNNNNNGTC 2 cut(s) 159, 944
AatII GACGTC 1 cut(s) 1271
Acc36I ACCTGC 2 cut(s) 92, 551
Acc65I GGTACC 1 cut(s) 882
AccB1I GGYRCC 1 cut(s) 882
AccBSI CCGCTC 1 cut(s) 1253
AccII CGCG 2 cut(s) 93, 1429
AclWI GGATC 7 cut(s) 140, 184, 305, 1925, 1925, 2066, 2111
AcoI YGGCCR 2 cut(s) 317, 1203
AcsI RAATTY 1 cut(s) 503
AcuI CTGAAG 3 cut(s) 1279, 1599, 1998
AcvI CACGTG 1 cut(s) 944
AcyI GRCGYC 1 cut(s) 1268
AfaI GTAC 6 cut(s) 403, 407, 634, 884, 910, 1237
AfiI CCNNNNNNNGG 5 cut(s) 292, 1061, 1201, 1470, 1583
AflII CTTAAG 1 cut(s) 1613
AflIII ACRYGT 1 cut(s) 943
AgsI TTSAA 4 cut(s) 275, 419, 536, 570
AjnI CCWGG 5 cut(s) 31, 1358, 1696, 1962, 1969
AleI CACNNNNGTG 1 cut(s) 545
AluBI AGCT 7 cut(s) 477, 487, 557, 803, 1021, 1299, 1598
AluI AGCT 7 cut(s) 477, 487, 557, 803, 1021, 1299, 1598
Alw21I GWGCWC 2 cut(s) 969, 1600
Alw26I GTCTC 8 cut(s) 375, 572, 884, 1119, 1125, 1131, 1495, 2032
AlwI GGATC 7 cut(s) 140, 184, 305, 1925, 1925, 2066, 2111
AlwNI CAGNNNCTG 2 cut(s) 38, 1976
Ama87I CYCGRG 1 cut(s) 1874
ApeKI GCWGC 5 cut(s) 185, 236, 280, 362, 1341
ApoI RAATTY 1 cut(s) 503
ArsI GACNNNNNNTTYG 2 cut(s) 1081, 1113
AseI ATTAAT 1 cut(s) 932
Asp718I GGTACC 1 cut(s) 882
AspLEI GCGC 7 cut(s) 56, 93, 285, 1429, 1431, 1654, 1881
AspS9I GGNCC 9 cut(s) 29, 35, 48, 471, 1320, 1362, 1392, 1585, 1966
AsuC2I CCSGG 5 cut(s) 1202, 1346, 1365, 1875, 1876
AsuHPI GGTGA 9 cut(s) 320, 334, 469, 773, 1006, 1125, 1453, 1915, 1966
AvaI CYCGRG 1 cut(s) 1874
AvaII GGWCC 3 cut(s) 35, 1392, 1966
BanI GGYRCC 1 cut(s) 882
BanII GRGCYC 1 cut(s) 1600
BarI GAAGNNNNNNTAC 2 cut(s) 385, 417
BauI CACGAG 1 cut(s) 1726
BbrPI CACGTG 1 cut(s) 944
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 2 cut(s) 969, 1600
BbvI GCAGC 5 cut(s) 172, 223, 292, 374, 1353
BccI CCATC 3 cut(s) 216, 1009, 1092
BceAI ACGGC 1 cut(s) 1391
BcgI CGANNNNNNTGC 2 cut(s) 1447, 1481
BciT130I CCWGG 5 cut(s) 33, 1360, 1698, 1964, 1971
BciVI GTATCC 1 cut(s) 587
BcnI CCSGG 5 cut(s) 1202, 1346, 1365, 1875, 1876
BcoDI GTCTC 8 cut(s) 375, 572, 884, 1119, 1125, 1131, 1495, 2032
BfaI CTAG 1 cut(s) 1449
BfmI CTRYAG 3 cut(s) 237, 1532, 1824
BfoI RGCGCY 1 cut(s) 286
BfrI CTTAAG 1 cut(s) 1613
BfuAI ACCTGC 2 cut(s) 92, 551
BfuI GTATCC 1 cut(s) 587
BglI GCCNNNNNGGC 1 cut(s) 164
BglII AGATCT 1 cut(s) 599
Bme18I GGWCC 3 cut(s) 35, 1392, 1966
BmeT110I CYCGRG 1 cut(s) 1874
BmgT120I GGNCC 9 cut(s) 29, 35, 48, 471, 1320, 1362, 1392, 1585, 1966
BmiI GGNNCC 5 cut(s) 97, 884, 1321, 1455, 1968
BmrI ACTGGG 1 cut(s) 352
BmuI ACTGGG 1 cut(s) 352
BoxI GACNNNNGTC 1 cut(s) 1397
BpiI GAAGAC 1 cut(s) 543
BpmI CTGGAG 4 cut(s) 85, 596, 857, 2043
Bpu10I CCTNAGC 1 cut(s) 1599
BpuMI CCSGG 5 cut(s) 1202, 1346, 1365, 1875, 1876
BsaAI YACGTR 2 cut(s) 405, 944
BsaBI GATNNNNATC 3 cut(s) 598, 669, 2070
BsaHI GRCGYC 1 cut(s) 1268
BsaI GGTCTC 2 cut(s) 375, 572
BsaJI CCNNGG 5 cut(s) 31, 1302, 1308, 1874, 1969
BsaWI WCCGGW 2 cut(s) 1394, 1636
Bsc4I CCNNNNNNNGG 5 cut(s) 292, 1061, 1201, 1470, 1583
Bse118I RCCGGY 4 cut(s) 50, 158, 319, 879
Bse1I ACTGG 1 cut(s) 347
Bse3DI GCAATG 1 cut(s) 1170
Bse8I GATNNNNATC 3 cut(s) 598, 669, 2070
BseBI CCWGG 5 cut(s) 33, 1360, 1698, 1964, 1971
BseDI CCNNGG 5 cut(s) 31, 1302, 1308, 1874, 1969
BseGI GGATG 5 cut(s) 1072, 1139, 1758, 2008, 2071
BseJI GATNNNNATC 3 cut(s) 598, 669, 2070
BseLI CCNNNNNNNGG 5 cut(s) 292, 1061, 1201, 1470, 1583
BseMI GCAATG 1 cut(s) 1170
BseMII CTCAG 5 cut(s) 24, 549, 818, 1508, 1613
BseNI ACTGG 1 cut(s) 347
BsePI GCGCGC 1 cut(s) 1427
BseRI GAGGAG 2 cut(s) 1178, 1213
BseX3I CGGCCG 1 cut(s) 317
BseXI GCAGC 5 cut(s) 172, 223, 292, 374, 1353
BseYI CCCAGC 6 cut(s) 128, 145, 188, 357, 473, 1431
BsgI GTGCAG 2 cut(s) 299, 400
Bsh1236I CGCG 2 cut(s) 93, 1429
Bsh1285I CGRYCG 2 cut(s) 139, 320
BshNI GGYRCC 1 cut(s) 882
BsiEI CGRYCG 2 cut(s) 139, 320
BsiHKAI GWGCWC 2 cut(s) 969, 1600
BsiHKCI CYCGRG 1 cut(s) 1874
BslFI GGGAC 3 cut(s) 239, 1448, 1952
BslI CCNNNNNNNGG 5 cut(s) 292, 1061, 1201, 1470, 1583
BsmAI GTCTC 8 cut(s) 375, 572, 884, 1119, 1125, 1131, 1495, 2032
BsmBI CGTCTC 4 cut(s) 1119, 1125, 1131, 1495
BsmFI GGGAC 3 cut(s) 239, 1448, 1952
BsmI GAATGC 1 cut(s) 1782
Bso31I GGTCTC 2 cut(s) 375, 572
BsoBI CYCGRG 1 cut(s) 1874
Bsp1286I GDGCHC 2 cut(s) 969, 1600
BspCNI CTCAG 5 cut(s) 23, 550, 817, 1507, 1612
BspFNI CGCG 2 cut(s) 93, 1429
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 5 cut(s) 97, 884, 1321, 1455, 1968
BspMAI CTGCAG 1 cut(s) 241
BspMI ACCTGC 2 cut(s) 92, 551
BspPI GGATC 7 cut(s) 140, 184, 305, 1925, 1925, 2066, 2111
BspQI GCTCTTC 1 cut(s) 1028
BspT107I GGYRCC 1 cut(s) 882
BspTI CTTAAG 1 cut(s) 1613
BspTNI GGTCTC 2 cut(s) 375, 572
BsrBI CCGCTC 1 cut(s) 1253
BsrDI GCAATG 1 cut(s) 1170
BsrFI RCCGGY 4 cut(s) 50, 158, 319, 879
BsrI ACTGG 1 cut(s) 347
BssAI RCCGGY 4 cut(s) 50, 158, 319, 879
BssECI CCNNGG 5 cut(s) 31, 1302, 1308, 1874, 1969
BssHII GCGCGC 1 cut(s) 1427
BssNI GRCGYC 1 cut(s) 1268
BssSI CACGAG 1 cut(s) 1726
BssT1I CCWWGG 1 cut(s) 1308
Bst2BI CACGAG 1 cut(s) 1726
Bst2UI CCWGG 5 cut(s) 33, 1360, 1698, 1964, 1971
Bst4CI ACNGT 3 cut(s) 971, 1465, 1903
Bst6I CTCTTC 2 cut(s) 1028, 1231
BstACI GRCGYC 1 cut(s) 1268
BstAFI CTTAAG 1 cut(s) 1613
BstBAI YACGTR 2 cut(s) 405, 944
BstDEI CTNAG 7 cut(s) 10, 558, 804, 818, 1494, 1599, 1800
BstENI CCTNNNNNAGG 1 cut(s) 290
BstF5I GGATG 5 cut(s) 1072, 1139, 1758, 2008, 2071
BstFNI CGCG 2 cut(s) 93, 1429
BstH2I RGCGCY 1 cut(s) 286
BstHHI GCGC 7 cut(s) 56, 93, 285, 1429, 1431, 1654, 1881
BstMAI GTCTC 8 cut(s) 375, 572, 884, 1119, 1125, 1131, 1495, 2032
BstMCI CGRYCG 2 cut(s) 139, 320
BstNI CCWGG 5 cut(s) 33, 1360, 1698, 1964, 1971
BstNSI RCATGY 3 cut(s) 740, 826, 1423
BstPAI GACNNNNGTC 1 cut(s) 1397
BstSFI CTRYAG 3 cut(s) 237, 1532, 1824
BstSNI TACGTA 1 cut(s) 405
BstUI CGCG 2 cut(s) 93, 1429
BstV1I GCAGC 5 cut(s) 172, 223, 292, 374, 1353
BstV2I GAAGAC 1 cut(s) 543
BstX2I RGATCY 4 cut(s) 599, 1917, 2071, 2116
BstYI RGATCY 4 cut(s) 599, 1917, 2071, 2116
BstZI CGGCCG 1 cut(s) 317
BsuI GTATCC 1 cut(s) 587
BtgZI GCGATG 1 cut(s) 1387
BtsCI GGATG 5 cut(s) 1072, 1139, 1758, 2008, 2071
BtsI GCAGTG 1 cut(s) 774
BtsIMutI CAGTG 1 cut(s) 774
BveI ACCTGC 2 cut(s) 92, 551
CaiI CAGNNNCTG 2 cut(s) 38, 1976
CciI TCATGA 1 cut(s) 727
CfoI GCGC 7 cut(s) 56, 93, 285, 1429, 1431, 1654, 1881
Cfr10I RCCGGY 4 cut(s) 50, 158, 319, 879
Cfr13I GGNCC 9 cut(s) 29, 35, 48, 471, 1320, 1362, 1392, 1585, 1966
Cfr9I CCCGGG 1 cut(s) 1874
CpoI CGGWCCG 1 cut(s) 1392
Csp6I GTAC 6 cut(s) 402, 406, 633, 883, 909, 1236
CspI CGGWCCG 1 cut(s) 1392
CviQI GTAC 6 cut(s) 402, 406, 633, 883, 909, 1236
DdeI CTNAG 7 cut(s) 10, 558, 804, 818, 1494, 1599, 1800
DraI TTTAAA 1 cut(s) 1858
DrdI GACNNNNNNGTC 2 cut(s) 159, 944
DseDI GACNNNNNNGTC 2 cut(s) 159, 944
EaeI YGGCCR 2 cut(s) 317, 1203
EagI CGGCCG 1 cut(s) 317
Eam1104I CTCTTC 2 cut(s) 1028, 1231
EarI CTCTTC 2 cut(s) 1028, 1231
EciI GGCGGA 5 cut(s) 606, 1065, 1132, 1141, 1172
Ecl136II GAGCTC 1 cut(s) 1598
EclXI CGGCCG 1 cut(s) 317
Eco105I TACGTA 1 cut(s) 405
Eco130I CCWWGG 1 cut(s) 1308
Eco147I AGGCCT 2 cut(s) 1167, 1307
Eco24I GRGCYC 1 cut(s) 1600
Eco31I GGTCTC 2 cut(s) 375, 572
Eco47I GGWCC 3 cut(s) 35, 1392, 1966
Eco52I CGGCCG 1 cut(s) 317
Eco53kI GAGCTC 1 cut(s) 1598
Eco57I CTGAAG 3 cut(s) 1279, 1599, 1998
Eco72I CACGTG 1 cut(s) 944
Eco88I CYCGRG 1 cut(s) 1874
EcoICRI GAGCTC 1 cut(s) 1598
EcoNI CCTNNNNNAGG 1 cut(s) 290
EcoO109I RGGNCCY 2 cut(s) 35, 1966
EcoRII CCWGG 5 cut(s) 31, 1358, 1696, 1962, 1969
EcoT14I CCWWGG 1 cut(s) 1308
EcoT38I GRGCYC 1 cut(s) 1600
ErhI CCWWGG 1 cut(s) 1308
Esp3I CGTCTC 4 cut(s) 1119, 1125, 1131, 1495
FalI AAGNNNNNCTT 2 cut(s) 1638, 1670
FaqI GGGAC 3 cut(s) 239, 1448, 1952
FauI CCCGC 5 cut(s) 1184, 1255, 1538, 1620, 1942
FokI GGATG 5 cut(s) 1059, 1126, 1765, 2015, 2078
FriOI GRGCYC 1 cut(s) 1600
FspBI CTAG 1 cut(s) 1449
GlaI GCGC 7 cut(s) 55, 92, 284, 1428, 1430, 1653, 1880
GsaI CCCAGC 6 cut(s) 132, 149, 192, 361, 477, 1435
GsuI CTGGAG 4 cut(s) 85, 596, 857, 2043
HaeII RGCGCY 1 cut(s) 286
HhaI GCGC 7 cut(s) 56, 93, 285, 1429, 1431, 1654, 1881
Hin1I GRCGYC 1 cut(s) 1268
Hin6I GCGC 7 cut(s) 54, 91, 283, 1427, 1429, 1652, 1879
HinP1I GCGC 7 cut(s) 54, 91, 283, 1427, 1429, 1652, 1879
HindIII AAGCTT 1 cut(s) 485
HinfI GANTC 6 cut(s) 227, 252, 670, 1398, 1521, 1722
HphI GGTGA 9 cut(s) 320, 334, 469, 773, 1006, 1125, 1453, 1915, 1966
Hpy166II GTNNAC 5 cut(s) 330, 708, 764, 974, 1315
Hpy188I TCNGA 9 cut(s) 111, 213, 292, 1289, 1303, 1458, 1569, 1595, 1833
Hpy8I GTNNAC 5 cut(s) 330, 708, 764, 974, 1315
Hpy99I CGWCG 8 cut(s) 111, 790, 793, 1098, 1101, 1267, 1270, 1273
HpyAV CCTTC 6 cut(s) 387, 690, 722, 1511, 1842, 1973
HpyCH4III ACNGT 3 cut(s) 971, 1465, 1903
HpyCH4IV ACGT 3 cut(s) 404, 943, 1268
HpyCH4V TGCA 8 cut(s) 219, 239, 280, 381, 431, 826, 875, 1051
HpyF3I CTNAG 7 cut(s) 10, 558, 804, 818, 1494, 1599, 1800
HpySE526I ACGT 3 cut(s) 404, 943, 1268
Hsp92I GRCGYC 1 cut(s) 1268
HspAI GCGC 7 cut(s) 54, 91, 283, 1427, 1429, 1652, 1879
KpnI GGTACC 1 cut(s) 886
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
LguI GCTCTTC 1 cut(s) 1028
LmnI GCTCC 5 cut(s) 95, 554, 964, 1304, 2062
Lsp1109I GCAGC 5 cut(s) 172, 223, 292, 374, 1353
MaeI CTAG 1 cut(s) 1449
MaeII ACGT 3 cut(s) 404, 943, 1268
MaeIII GTNAC 5 cut(s) 308, 1131, 1639, 1714, 1803
MbiI CCGCTC 1 cut(s) 1253
MflI RGATCY 4 cut(s) 599, 1917, 2071, 2116
MhlI GDGCHC 2 cut(s) 969, 1600
MluCI AATT 8 cut(s) 21, 438, 503, 675, 831, 929, 933, 1926
MlyI GAGTC 2 cut(s) 221, 1407
MmeI TCCRAC 2 cut(s) 89, 2069
MroNI GCCGGC 1 cut(s) 50
MseI TTAA 6 cut(s) 498, 926, 932, 1104, 1614, 1857
MslI CAYNNNNRTG 1 cut(s) 545
MspA1I CMGCKG 1 cut(s) 2092
MspCI CTTAAG 1 cut(s) 1613
Mva1269I GAATGC 1 cut(s) 1782
MvaI CCWGG 5 cut(s) 33, 1360, 1698, 1964, 1971
MvnI CGCG 2 cut(s) 93, 1429
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 5 cut(s) 1202, 1346, 1365, 1875, 1876
NgoMIV GCCGGC 1 cut(s) 50
NlaIV GGNNCC 5 cut(s) 97, 884, 1321, 1455, 1968
NmeAIII GCCGAG 1 cut(s) 1348
NmuCI GTSAC 3 cut(s) 308, 1131, 1803
NspI RCATGY 3 cut(s) 740, 826, 1423
OliI CACNNNNGTG 1 cut(s) 545
PaeI GCATGC 2 cut(s) 740, 826
PagI TCATGA 1 cut(s) 727
PaqCI CACCTGC 1 cut(s) 551
PauI GCGCGC 1 cut(s) 1427
PceI AGGCCT 2 cut(s) 1167, 1307
PciSI GCTCTTC 1 cut(s) 1028
PcsI WCGNNNNNNNCGW 1 cut(s) 1268
PctI GAATGC 1 cut(s) 1782
PdiI GCCGGC 1 cut(s) 52
PfeI GAWTC 4 cut(s) 252, 670, 1521, 1722
PflFI GACNNNGTC 1 cut(s) 1267
PleI GAGTC 2 cut(s) 221, 1406
PmaCI CACGTG 1 cut(s) 944
PmlI CACGTG 1 cut(s) 944
PpsI GAGTC 2 cut(s) 221, 1406
Ppu21I YACGTR 2 cut(s) 405, 944
PpuMI RGGWCCY 2 cut(s) 35, 1966
PshAI GACNNNNGTC 1 cut(s) 1397
PshBI ATTAAT 1 cut(s) 932
Psp124BI GAGCTC 1 cut(s) 1600
Psp5II RGGWCCY 2 cut(s) 35, 1966
Psp6I CCWGG 5 cut(s) 31, 1358, 1696, 1962, 1969
PspCI CACGTG 1 cut(s) 944
PspFI CCCAGC 6 cut(s) 128, 145, 188, 357, 473, 1431
PspGI CCWGG 5 cut(s) 31, 1358, 1696, 1962, 1969
PspN4I GGNNCC 5 cut(s) 97, 884, 1321, 1455, 1968
PspPI GGNCC 9 cut(s) 29, 35, 48, 471, 1320, 1362, 1392, 1585, 1966
PspPPI RGGWCCY 2 cut(s) 35, 1966
PstI CTGCAG 1 cut(s) 241
PstNI CAGNNNCTG 2 cut(s) 38, 1976
PsuI RGATCY 4 cut(s) 599, 1917, 2071, 2116
PsyI GACNNNGTC 1 cut(s) 1267
PteI GCGCGC 1 cut(s) 1427
RsaI GTAC 6 cut(s) 403, 407, 634, 884, 910, 1237
RsaNI GTAC 6 cut(s) 402, 406, 633, 883, 909, 1236
RseI CAYNNNNRTG 1 cut(s) 545
Rsr2I CGGWCCG 1 cut(s) 1392
RsrII CGGWCCG 1 cut(s) 1392
SacI GAGCTC 1 cut(s) 1600
SapI GCTCTTC 1 cut(s) 1028
SaqAI TTAA 6 cut(s) 498, 926, 932, 1104, 1614, 1857
Sau96I GGNCC 9 cut(s) 29, 35, 48, 471, 1320, 1362, 1392, 1585, 1966
SchI GAGTC 2 cut(s) 221, 1407
SduI GDGCHC 2 cut(s) 969, 1600
SfcI CTRYAG 3 cut(s) 237, 1532, 1824
SinI GGWCC 3 cut(s) 35, 1392, 1966
SmaI CCCGGG 1 cut(s) 1876
SmiMI CAYNNNNRTG 1 cut(s) 545
SmlI CTYRAG 1 cut(s) 1613
SmoI CTYRAG 1 cut(s) 1613
SnaBI TACGTA 1 cut(s) 405
SphI GCATGC 2 cut(s) 740, 826
SrfI GCCCGGGC 1 cut(s) 1876
Sse9I AATT 8 cut(s) 21, 438, 503, 675, 831, 929, 933, 1926
SseBI AGGCCT 2 cut(s) 1167, 1307
SspMI CTAG 1 cut(s) 1449
SstI GAGCTC 1 cut(s) 1600
StuI AGGCCT 2 cut(s) 1167, 1307
StyI CCWWGG 1 cut(s) 1308
TaaI ACNGT 3 cut(s) 971, 1465, 1903
TaiI ACGT 3 cut(s) 407, 946, 1271
TaqII GACCGA 1 cut(s) 125
TasI AATT 8 cut(s) 21, 438, 503, 675, 831, 929, 933, 1926
TauI GCSGC 5 cut(s) 101, 145, 319, 1253, 2132
TfiI GAWTC 4 cut(s) 252, 670, 1521, 1722
Tru1I TTAA 6 cut(s) 498, 926, 932, 1104, 1614, 1857
Tru9I TTAA 6 cut(s) 498, 926, 932, 1104, 1614, 1857
TscAI CASTG 1 cut(s) 781
TseFI GTSAC 3 cut(s) 308, 1131, 1803
TseI GCWGC 5 cut(s) 185, 236, 280, 362, 1341
Tsp45I GTSAC 3 cut(s) 308, 1131, 1803
TspDTI ATGAA 5 cut(s) 440, 744, 799, 1769, 2082
TspGWI ACGGA 4 cut(s) 1101, 1107, 1113, 1119
TspMI CCCGGG 1 cut(s) 1874
TspRI CASTG 1 cut(s) 781
Tth111I GACNNNGTC 1 cut(s) 1267
Vha464I CTTAAG 1 cut(s) 1613
VpaK11BI GGWCC 3 cut(s) 35, 1392, 1966
VspI ATTAAT 1 cut(s) 932
XagI CCTNNNNNAGG 1 cut(s) 290
XapI RAATTY 1 cut(s) 503
XceI RCATGY 3 cut(s) 740, 826, 1423
XmaI CCCGGG 1 cut(s) 1874
XspI CTAG 1 cut(s) 1449
ZraI GACGTC 1 cut(s) 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.