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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008433 RLG00000009204 RLG00000022305 RLG00000022729 |
| rosa_multiflora | Rmu_sc0004660.1_g000015 Rmu_sc0027128.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433770 Rroxscaffold_4G00328040 Rroxscaffold_7G00174430 |
| rosa_rugosa | Rorug02G0120600 |
| rosa_samantha | Rh1BG041000 Rh1CG054600 Rh2CG176100 Rh2CG370700 Rh3AG328800 Rh4AG061900 Rh4BG059500 Rh4CG065200 Rh5AG130900 Rh5DG131000 Rh6CG359500 Rh7CG314700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 216 |
| AciI | CCGC | 2 cut(s) | 26, 68 |
| AcuI | CTGAAG | 1 cut(s) | 122 |
| AcyI | GRCGYC | 1 cut(s) | 217 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 300 |
| AluBI | AGCT | 2 cut(s) | 47, 137 |
| AluI | AGCT | 2 cut(s) | 47, 137 |
| Alw21I | GWGCWC | 1 cut(s) | 49 |
| Ama87I | CYCGRG | 1 cut(s) | 226 |
| ApeKI | GCWGC | 3 cut(s) | 20, 23, 137 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 253, 285 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| AvaI | CYCGRG | 1 cut(s) | 226 |
| BanI | GGYRCC | 1 cut(s) | 216 |
| BanII | GRGCYC | 2 cut(s) | 49, 294 |
| Bbv12I | GWGCWC | 1 cut(s) | 49 |
| BbvI | GCAGC | 3 cut(s) | 32, 35, 124 |
| BccI | CCATC | 1 cut(s) | 303 |
| BfoI | RGCGCY | 1 cut(s) | 220 |
| BisI | GCNGC | 4 cut(s) | 21, 24, 69, 138 |
| BlsI | GCNGC | 4 cut(s) | 22, 25, 70, 139 |
| BmeT110I | CYCGRG | 1 cut(s) | 226 |
| BmiI | GGNNCC | 2 cut(s) | 30, 218 |
| BsaHI | GRCGYC | 1 cut(s) | 217 |
| BsaJI | CCNNGG | 2 cut(s) | 192, 208 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 300 |
| BseDI | CCNNGG | 2 cut(s) | 192, 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 300 |
| BseXI | GCAGC | 3 cut(s) | 32, 35, 124 |
| BseYI | CCCAGC | 1 cut(s) | 95 |
| BshNI | GGYRCC | 1 cut(s) | 216 |
| BsiHKAI | GWGCWC | 1 cut(s) | 49 |
| BsiHKCI | CYCGRG | 1 cut(s) | 226 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 300 |
| BsoBI | CYCGRG | 1 cut(s) | 226 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 294 |
| BspACI | CCGC | 2 cut(s) | 26, 68 |
| BspLI | GGNNCC | 2 cut(s) | 30, 218 |
| BspT107I | GGYRCC | 1 cut(s) | 216 |
| BssECI | CCNNGG | 2 cut(s) | 192, 208 |
| BssNI | GRCGYC | 1 cut(s) | 217 |
| BssT1I | CCWWGG | 1 cut(s) | 192 |
| BstACI | GRCGYC | 1 cut(s) | 217 |
| BstH2I | RGCGCY | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstV1I | GCAGC | 3 cut(s) | 32, 35, 124 |
| CfoI | GCGC | 1 cut(s) | 219 |
| CviJI | RGCY | 8 cut(s) | 31, 47, 71, 95, 100, 137, 190, 292 |
| CviKI_1 | RGCY | 8 cut(s) | 31, 47, 71, 95, 100, 137, 190, 292 |
| DinI | GGCGCC | 1 cut(s) | 218 |
| Ecl136II | GAGCTC | 1 cut(s) | 47 |
| Eco130I | CCWWGG | 1 cut(s) | 192 |
| Eco24I | GRGCYC | 2 cut(s) | 49, 294 |
| Eco53kI | GAGCTC | 1 cut(s) | 47 |
| Eco57I | CTGAAG | 1 cut(s) | 122 |
| Eco88I | CYCGRG | 1 cut(s) | 226 |
| EcoICRI | GAGCTC | 1 cut(s) | 47 |
| EcoT14I | CCWWGG | 1 cut(s) | 192 |
| EcoT38I | GRGCYC | 2 cut(s) | 49, 294 |
| EgeI | GGCGCC | 1 cut(s) | 218 |
| EheI | GGCGCC | 1 cut(s) | 218 |
| ErhI | CCWWGG | 1 cut(s) | 192 |
| FaiI | YATR | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 4 cut(s) | 21, 24, 69, 138 |
| FriOI | GRGCYC | 2 cut(s) | 49, 294 |
| Fsp4HI | GCNGC | 4 cut(s) | 21, 24, 69, 138 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GluI | GCNGC | 4 cut(s) | 21, 24, 69, 138 |
| GsaI | CCCAGC | 1 cut(s) | 99 |
| HaeII | RGCGCY | 1 cut(s) | 220 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1I | GRCGYC | 1 cut(s) | 217 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 2 cut(s) | 226, 228 |
| HpyAV | CCTTC | 2 cut(s) | 58, 85 |
| Hsp92I | GRCGYC | 1 cut(s) | 217 |
| HspAI | GCGC | 1 cut(s) | 217 |
| KasI | GGCGCC | 1 cut(s) | 216 |
| LmnI | GCTCC | 3 cut(s) | 28, 44, 52 |
| LpnPI | CCDG | 4 cut(s) | 26, 40, 45, 81 |
| Lsp1109I | GCAGC | 3 cut(s) | 32, 35, 124 |
| MboII | GAAGA | 4 cut(s) | 70, 73, 97, 100 |
| MhlI | GDGCHC | 2 cut(s) | 49, 294 |
| Mly113I | GGCGCC | 1 cut(s) | 217 |
| MnlI | CCTC | 4 cut(s) | 203, 207, 230, 269 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| NarI | GGCGCC | 1 cut(s) | 217 |
| NlaIV | GGNNCC | 2 cut(s) | 30, 218 |
| PaeR7I | CTCGAG | 1 cut(s) | 226 |
| PkrI | GCNGC | 4 cut(s) | 22, 25, 70, 139 |
| PluTI | GGCGCC | 1 cut(s) | 220 |
| Psp124BI | GAGCTC | 1 cut(s) | 49 |
| PspFI | CCCAGC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 2 cut(s) | 30, 218 |
| SacI | GAGCTC | 1 cut(s) | 49 |
| SatI | GCNGC | 4 cut(s) | 21, 24, 69, 138 |
| SduI | GDGCHC | 2 cut(s) | 49, 294 |
| SetI | ASST | 5 cut(s) | 49, 139, 198, 280, 305 |
| SfoI | GGCGCC | 1 cut(s) | 218 |
| Sfr274I | CTCGAG | 1 cut(s) | 226 |
| SlaI | CTCGAG | 1 cut(s) | 226 |
| SmlI | CTYRAG | 1 cut(s) | 226 |
| SmoI | CTYRAG | 1 cut(s) | 226 |
| SsiI | CCGC | 2 cut(s) | 26, 68 |
| SspDI | GGCGCC | 1 cut(s) | 216 |
| SstI | GAGCTC | 1 cut(s) | 49 |
| StyI | CCWWGG | 1 cut(s) | 192 |
| TaqI | TCGA | 2 cut(s) | 227, 288 |
| TauI | GCSGC | 1 cut(s) | 71 |
| TseI | GCWGC | 3 cut(s) | 20, 23, 137 |
| TspDTI | ATGAA | 1 cut(s) | 147 |
| XhoI | CTCGAG | 1 cut(s) | 226 |