Short-chain dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008433 RLG00000009204 RLG00000022305 RLG00000022729 |
| rosa_multiflora | Rmu_sc0004660.1_g000015 Rmu_sc0027128.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433770 Rroxscaffold_4G00328040 Rroxscaffold_7G00174430 |
| rosa_rugosa | Rorug02G0120600 |
| rosa_samantha | Rh1BG041000 Rh1CG054600 Rh2CG176100 Rh2CG370700 Rh3AG328800 Rh4AG061900 Rh4BG059500 Rh4CG065200 Rh5AG130900 Rh5DG131000 Rh6CG359500 Rh7CG314700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 23 |
| AcsI | RAATTY | 1 cut(s) | 145 |
| AcyI | GRCGYC | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 121, 126 |
| AluI | AGCT | 2 cut(s) | 121, 126 |
| ApoI | RAATTY | 1 cut(s) | 145 |
| BccI | CCATC | 1 cut(s) | 86 |
| BciVI | GTATCC | 1 cut(s) | 40 |
| BfuI | GTATCC | 1 cut(s) | 40 |
| BisI | GCNGC | 1 cut(s) | 23 |
| BlpI | GCTNAGC | 1 cut(s) | 122 |
| BlsI | GCNGC | 1 cut(s) | 24 |
| BmsI | GCATC | 1 cut(s) | 94 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 122 |
| BsaHI | GRCGYC | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| Bse118I | RCCGGY | 1 cut(s) | 25 |
| Bse1I | ACTGG | 1 cut(s) | 51 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseNI | ACTGG | 1 cut(s) | 51 |
| Bsh1285I | CGRYCG | 1 cut(s) | 196 |
| BsiEI | CGRYCG | 1 cut(s) | 196 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslFI | GGGAC | 1 cut(s) | 31 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 31 |
| BsmI | GAATGC | 1 cut(s) | 181 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 122 |
| Bsp19I | CCATGG | 1 cut(s) | 108 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BsrFI | RCCGGY | 1 cut(s) | 25 |
| BsrI | ACTGG | 1 cut(s) | 51 |
| BssAI | RCCGGY | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| BssMI | GATC | 1 cut(s) | 193 |
| BssNI | GRCGYC | 1 cut(s) | 20 |
| BssT1I | CCWWGG | 1 cut(s) | 108 |
| BstACI | GRCGYC | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 27 |
| BstDEI | CTNAG | 1 cut(s) | 122 |
| BstDSI | CCRYGG | 1 cut(s) | 108 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstMCI | CGRYCG | 1 cut(s) | 196 |
| BsuI | GTATCC | 1 cut(s) | 40 |
| BtgI | CCRYGG | 1 cut(s) | 108 |
| Cac8I | GCNNGC | 1 cut(s) | 27 |
| Cfr10I | RCCGGY | 1 cut(s) | 25 |
| CseI | GACGC | 1 cut(s) | 28 |
| CviAII | CATG | 1 cut(s) | 109 |
| CviJI | RGCY | 3 cut(s) | 29, 121, 126 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 121, 126 |
| DdeI | CTNAG | 1 cut(s) | 122 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| DraI | TTTAAA | 1 cut(s) | 79 |
| Eco130I | CCWWGG | 1 cut(s) | 108 |
| EcoT14I | CCWWGG | 1 cut(s) | 108 |
| ErhI | CCWWGG | 1 cut(s) | 108 |
| FaeI | CATG | 1 cut(s) | 112 |
| FaiI | YATR | 3 cut(s) | 110, 136, 138 |
| FaqI | GGGAC | 1 cut(s) | 31 |
| FatI | CATG | 1 cut(s) | 108 |
| FauNDI | CATATG | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 1 cut(s) | 23 |
| Fsp4HI | GCNGC | 1 cut(s) | 23 |
| GluI | GCNGC | 1 cut(s) | 23 |
| HapII | CCGG | 1 cut(s) | 26 |
| HgaI | GACGC | 1 cut(s) | 28 |
| Hin1I | GRCGYC | 1 cut(s) | 20 |
| Hin1II | CATG | 1 cut(s) | 112 |
| HpaII | CCGG | 1 cut(s) | 26 |
| Hpy188III | TCNNGA | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 2 cut(s) | 134, 179 |
| HpyF3I | CTNAG | 1 cut(s) | 122 |
| Hsp92I | GRCGYC | 1 cut(s) | 20 |
| Hsp92II | CATG | 1 cut(s) | 112 |
| KroI | GCCGGC | 1 cut(s) | 25 |
| KroNI | GCCGGC | 1 cut(s) | 27 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LpnPI | CCDG | 2 cut(s) | 39, 64 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeIII | GTNAC | 2 cut(s) | 53, 186 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MboII | GAAGA | 5 cut(s) | 80, 169, 172, 175, 178 |
| MluCI | AATT | 3 cut(s) | 99, 145, 170 |
| MroNI | GCCGGC | 1 cut(s) | 25 |
| MseI | TTAA | 2 cut(s) | 78, 150 |
| MspI | CCGG | 1 cut(s) | 26 |
| Mva1269I | GAATGC | 1 cut(s) | 181 |
| NaeI | GCCGGC | 1 cut(s) | 27 |
| NcoI | CCATGG | 1 cut(s) | 108 |
| NdeI | CATATG | 1 cut(s) | 136 |
| NdeII | GATC | 1 cut(s) | 193 |
| NgoMIV | GCCGGC | 1 cut(s) | 25 |
| NlaIII | CATG | 1 cut(s) | 112 |
| PctI | GAATGC | 1 cut(s) | 181 |
| PdiI | GCCGGC | 1 cut(s) | 27 |
| PkrI | GCNGC | 1 cut(s) | 24 |
| Ple19I | CGATCG | 1 cut(s) | 196 |
| PvuI | CGATCG | 1 cut(s) | 196 |
| SaqAI | TTAA | 2 cut(s) | 78, 150 |
| SatI | GCNGC | 1 cut(s) | 23 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SetI | ASST | 3 cut(s) | 37, 123, 128 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SgeI | CNNG | 6 cut(s) | 28, 38, 55, 63, 101, 121 |
| Sse9I | AATT | 3 cut(s) | 99, 145, 170 |
| SsiI | CCGC | 1 cut(s) | 23 |
| SspI | AATATT | 1 cut(s) | 183 |
| StyI | CCWWGG | 1 cut(s) | 108 |
| TaqI | TCGA | 2 cut(s) | 37, 192 |
| TasI | AATT | 3 cut(s) | 99, 145, 170 |
| TauI | GCSGC | 1 cut(s) | 25 |
| Tru1I | TTAA | 2 cut(s) | 78, 150 |
| Tru9I | TTAA | 2 cut(s) | 78, 150 |
| TspGWI | ACGGA | 1 cut(s) | 59 |
| XapI | RAATTY | 1 cut(s) | 145 |