ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008433 RLG00000009204 RLG00000022305 RLG00000022729 |
| rosa_multiflora | Rmu_sc0004660.1_g000015 Rmu_sc0027128.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433770 Rroxscaffold_4G00328040 Rroxscaffold_7G00174430 |
| rosa_rugosa | Rorug02G0120600 |
| rosa_samantha | Rh1BG041000 Rh1CG054600 Rh2CG176100 Rh2CG370700 Rh3AG328800 Rh4AG061900 Rh4BG059500 Rh4CG065200 Rh5AG130900 Rh5DG131000 Rh6CG359500 Rh7CG314700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 151 |
| AciI | CCGC | 1 cut(s) | 151 |
| AclWI | GGATC | 1 cut(s) | 221 |
| AcuI | CTGAAG | 2 cut(s) | 221, 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 271 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AluBI | AGCT | 3 cut(s) | 114, 197, 250 |
| AluI | AGCT | 3 cut(s) | 114, 197, 250 |
| Alw26I | GTCTC | 1 cut(s) | 170 |
| AlwI | GGATC | 1 cut(s) | 221 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 117 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 11 |
| BanII | GRGCYC | 1 cut(s) | 264 |
| BauI | CACGAG | 1 cut(s) | 146 |
| BccI | CCATC | 1 cut(s) | 273 |
| BcoDI | GTCTC | 1 cut(s) | 170 |
| BfaI | CTAG | 1 cut(s) | 289 |
| BmiI | GGNNCC | 1 cut(s) | 216 |
| BmsI | GCATC | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 271 |
| Bse3DI | GCAATG | 1 cut(s) | 178 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseMI | GCAATG | 1 cut(s) | 178 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BsmAI | GTCTC | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 1 cut(s) | 264 |
| Bsp143I | GATC | 2 cut(s) | 45, 226 |
| BspACI | CCGC | 1 cut(s) | 151 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspLI | GGNNCC | 1 cut(s) | 216 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BsrBI | CCGCTC | 1 cut(s) | 151 |
| BsrDI | GCAATG | 1 cut(s) | 178 |
| BssMI | GATC | 2 cut(s) | 45, 226 |
| BssSI | CACGAG | 1 cut(s) | 146 |
| Bst2BI | CACGAG | 1 cut(s) | 146 |
| BstC8I | GCNNGC | 1 cut(s) | 260 |
| BstDEI | CTNAG | 3 cut(s) | 121, 246, 279 |
| BstKTI | GATC | 2 cut(s) | 48, 229 |
| BstMAI | GTCTC | 1 cut(s) | 170 |
| BstMBI | GATC | 2 cut(s) | 45, 226 |
| Cac8I | GCNNGC | 1 cut(s) | 260 |
| CaiI | CAGNNNCTG | 1 cut(s) | 117 |
| CviJI | RGCY | 4 cut(s) | 114, 197, 250, 262 |
| CviKI_1 | RGCY | 4 cut(s) | 114, 197, 250, 262 |
| DdeI | CTNAG | 3 cut(s) | 121, 246, 279 |
| DpnI | GATC | 2 cut(s) | 47, 228 |
| DpnII | GATC | 2 cut(s) | 45, 226 |
| Eco24I | GRGCYC | 1 cut(s) | 264 |
| Eco57I | CTGAAG | 2 cut(s) | 221, 290 |
| EcoT38I | GRGCYC | 1 cut(s) | 264 |
| FaiI | YATR | 1 cut(s) | 24 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 50, 82 |
| FriOI | GRGCYC | 1 cut(s) | 264 |
| FspBI | CTAG | 1 cut(s) | 289 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| HinfI | GANTC | 2 cut(s) | 89, 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 4 cut(s) | 226, 247, 270, 282 |
| Hpy188III | TCNNGA | 1 cut(s) | 101 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyAV | CCTTC | 3 cut(s) | 152, 265, 277 |
| HpyCH4V | TGCA | 1 cut(s) | 202 |
| HpyF3I | CTNAG | 3 cut(s) | 121, 246, 279 |
| Kzo9I | GATC | 2 cut(s) | 45, 226 |
| LmnI | GCTCC | 1 cut(s) | 119 |
| LpnPI | CCDG | 5 cut(s) | 21, 68, 130, 165, 224 |
| LweI | GCATC | 1 cut(s) | 251 |
| MaeI | CTAG | 1 cut(s) | 289 |
| MalI | GATC | 2 cut(s) | 47, 228 |
| MbiI | CCGCTC | 1 cut(s) | 151 |
| MboI | GATC | 2 cut(s) | 45, 226 |
| MfeI | CAATTG | 1 cut(s) | 209 |
| MhlI | GDGCHC | 1 cut(s) | 264 |
| MluCI | AATT | 1 cut(s) | 209 |
| MlyI | GAGTC | 1 cut(s) | 83 |
| MnlI | CCTC | 2 cut(s) | 19, 180 |
| MroXI | GAANNNNTTC | 1 cut(s) | 11 |
| MunI | CAATTG | 1 cut(s) | 209 |
| NdeII | GATC | 2 cut(s) | 45, 226 |
| NlaIV | GGNNCC | 1 cut(s) | 216 |
| PdmI | GAANNNNTTC | 1 cut(s) | 11 |
| PfeI | GAWTC | 1 cut(s) | 127 |
| PleI | GAGTC | 1 cut(s) | 83 |
| PpsI | GAGTC | 1 cut(s) | 83 |
| PspN4I | GGNNCC | 1 cut(s) | 216 |
| PstNI | CAGNNNCTG | 1 cut(s) | 117 |
| Sau3AI | GATC | 2 cut(s) | 45, 226 |
| SchI | GAGTC | 1 cut(s) | 83 |
| SduI | GDGCHC | 1 cut(s) | 264 |
| SetI | ASST | 5 cut(s) | 116, 163, 184, 199, 252 |
| SfaNI | GCATC | 1 cut(s) | 251 |
| Sse9I | AATT | 1 cut(s) | 209 |
| SsiI | CCGC | 1 cut(s) | 151 |
| SspI | AATATT | 1 cut(s) | 10 |
| SspMI | CTAG | 1 cut(s) | 289 |
| TasI | AATT | 1 cut(s) | 209 |
| TfiI | GAWTC | 1 cut(s) | 127 |
| TspDTI | ATGAA | 2 cut(s) | 20, 97 |
| XmnI | GAANNNNTTC | 1 cut(s) | 11 |
| XspI | CTAG | 1 cut(s) | 289 |