ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G40390 AT1G43760 |
| fragaria_vesca | FvH4_2g05581 FvH4_3g29012 |
| rosa_laevigata | RLG00000017307 |
| rosa_multiflora | Rmu_sc0000447.1_g000013 Rmu_sc0000647.1_g000017 Rmu_sc0001616.1_g000010 Rmu_sc0004932.1_g000002 Rmu_sc0032291.1_g000001 Rmu_sc0035385.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00031810 |
| rosa_samantha | Rh3BG325500 Rh3BG325600 Rh3BG372000 Rh3BG372200 Rh4CG249400 Rh5CG378300 Rh6BG242500 Rh6CG069600 Rh6DG066600 Rh7CG451600 Rh7CG469200 Rh7DG357300 |
| rosa_wichuraiana | Rw4G014200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 12, 361, 416 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AluBI | AGCT | 1 cut(s) | 245 |
| AluI | AGCT | 1 cut(s) | 245 |
| Alw26I | GTCTC | 1 cut(s) | 62 |
| AlwI | GGATC | 3 cut(s) | 12, 361, 416 |
| ApeKI | GCWGC | 6 cut(s) | 32, 59, 166, 185, 188, 245 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 19 |
| BanII | GRGCYC | 1 cut(s) | 121 |
| BbvI | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| BccI | CCATC | 2 cut(s) | 87, 313 |
| BcoDI | GTCTC | 1 cut(s) | 62 |
| BfmI | CTRYAG | 1 cut(s) | 246 |
| BisI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| BlsI | GCNGC | 6 cut(s) | 34, 61, 168, 187, 190, 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 136, 168 |
| BsaJI | CCNNGG | 1 cut(s) | 179 |
| Bse1I | ACTGG | 1 cut(s) | 200 |
| BseDI | CCNNGG | 1 cut(s) | 179 |
| BseNI | ACTGG | 1 cut(s) | 200 |
| BseRI | GAGGAG | 1 cut(s) | 15 |
| BseXI | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| BsmAI | GTCTC | 1 cut(s) | 62 |
| Bsp1286I | GDGCHC | 1 cut(s) | 121 |
| Bsp143I | GATC | 3 cut(s) | 4, 366, 408 |
| Bsp19I | CCATGG | 1 cut(s) | 179 |
| BspHI | TCATGA | 1 cut(s) | 400 |
| BspMAI | CTGCAG | 1 cut(s) | 250 |
| BspPI | GGATC | 3 cut(s) | 12, 361, 416 |
| BsrI | ACTGG | 1 cut(s) | 200 |
| BssECI | CCNNGG | 1 cut(s) | 179 |
| BssMI | GATC | 3 cut(s) | 4, 366, 408 |
| BssT1I | CCWWGG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 1 cut(s) | 281 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 254 |
| BstDSI | CCRYGG | 1 cut(s) | 179 |
| BstKTI | GATC | 3 cut(s) | 7, 369, 411 |
| BstMAI | GTCTC | 1 cut(s) | 62 |
| BstMBI | GATC | 3 cut(s) | 4, 366, 408 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 242, 254 |
| BstSFI | CTRYAG | 1 cut(s) | 246 |
| BstV1I | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| BstX2I | RGATCY | 1 cut(s) | 366 |
| BstYI | RGATCY | 1 cut(s) | 366 |
| BtgI | CCRYGG | 1 cut(s) | 179 |
| CciI | TCATGA | 1 cut(s) | 400 |
| CviAII | CATG | 3 cut(s) | 38, 180, 401 |
| CviJI | RGCY | 4 cut(s) | 119, 185, 245, 300 |
| CviKI_1 | RGCY | 4 cut(s) | 119, 185, 245, 300 |
| DpnI | GATC | 3 cut(s) | 6, 368, 410 |
| DpnII | GATC | 3 cut(s) | 4, 366, 408 |
| Eco130I | CCWWGG | 1 cut(s) | 179 |
| Eco24I | GRGCYC | 1 cut(s) | 121 |
| EcoT14I | CCWWGG | 1 cut(s) | 179 |
| EcoT38I | GRGCYC | 1 cut(s) | 121 |
| ErhI | CCWWGG | 1 cut(s) | 179 |
| FaeI | CATG | 3 cut(s) | 41, 183, 404 |
| FaiI | YATR | 9 cut(s) | 39, 102, 181, 255, 341, 343, 349, 393, 402 |
| FatI | CATG | 3 cut(s) | 37, 179, 400 |
| FauNDI | CATATG | 1 cut(s) | 341 |
| Fnu4HI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| FriOI | GRGCYC | 1 cut(s) | 121 |
| Fsp4HI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| GluI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| Hin1II | CATG | 3 cut(s) | 41, 183, 404 |
| HinfI | GANTC | 3 cut(s) | 70, 335, 414 |
| Hpy188I | TCNGA | 1 cut(s) | 413 |
| Hpy188III | TCNNGA | 1 cut(s) | 401 |
| HpyAV | CCTTC | 2 cut(s) | 193, 390 |
| HpyCH4III | ACNGT | 1 cut(s) | 281 |
| HpyCH4V | TGCA | 2 cut(s) | 221, 248 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 242, 254 |
| Hsp92II | CATG | 3 cut(s) | 41, 183, 404 |
| Kzo9I | GATC | 3 cut(s) | 4, 366, 408 |
| LpnPI | CCDG | 5 cut(s) | 93, 181, 247, 307, 384 |
| Lsp1109I | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| MaeIII | GTNAC | 1 cut(s) | 290 |
| MalI | GATC | 3 cut(s) | 6, 368, 410 |
| MboI | GATC | 3 cut(s) | 4, 366, 408 |
| MboII | GAAGA | 1 cut(s) | 376 |
| MfeI | CAATTG | 1 cut(s) | 327 |
| MflI | RGATCY | 1 cut(s) | 366 |
| MhlI | GDGCHC | 1 cut(s) | 121 |
| MluCI | AATT | 2 cut(s) | 15, 327 |
| MlyI | GAGTC | 3 cut(s) | 64, 344, 408 |
| MnlI | CCTC | 4 cut(s) | 36, 115, 162, 311 |
| MroXI | GAANNNNTTC | 1 cut(s) | 19 |
| MseI | TTAA | 1 cut(s) | 424 |
| MslI | CAYNNNNRTG | 1 cut(s) | 42 |
| MunI | CAATTG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 242, 254 |
| NcoI | CCATGG | 1 cut(s) | 179 |
| NdeI | CATATG | 1 cut(s) | 341 |
| NdeII | GATC | 3 cut(s) | 4, 366, 408 |
| NlaIII | CATG | 3 cut(s) | 41, 183, 404 |
| PagI | TCATGA | 1 cut(s) | 400 |
| PdmI | GAANNNNTTC | 1 cut(s) | 19 |
| PkrI | GCNGC | 6 cut(s) | 34, 61, 168, 187, 190, 247 |
| PleI | GAGTC | 3 cut(s) | 64, 343, 408 |
| PpsI | GAGTC | 3 cut(s) | 64, 343, 408 |
| PstI | CTGCAG | 1 cut(s) | 250 |
| PsuI | RGATCY | 1 cut(s) | 366 |
| RseI | CAYNNNNRTG | 1 cut(s) | 42 |
| SaqAI | TTAA | 1 cut(s) | 424 |
| SatI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| Sau3AI | GATC | 3 cut(s) | 4, 366, 408 |
| SchI | GAGTC | 3 cut(s) | 64, 344, 408 |
| SduI | GDGCHC | 1 cut(s) | 121 |
| SetI | ASST | 2 cut(s) | 107, 247 |
| SfcI | CTRYAG | 1 cut(s) | 246 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 42 |
| Sse9I | AATT | 2 cut(s) | 15, 327 |
| StyI | CCWWGG | 1 cut(s) | 179 |
| TaaI | ACNGT | 1 cut(s) | 281 |
| TasI | AATT | 2 cut(s) | 15, 327 |
| Tru1I | TTAA | 1 cut(s) | 424 |
| Tru9I | TTAA | 1 cut(s) | 424 |
| TseI | GCWGC | 6 cut(s) | 32, 59, 166, 185, 188, 245 |
| TspDTI | ATGAA | 4 cut(s) | 54, 163, 389, 417 |
| TspGWI | ACGGA | 1 cut(s) | 278 |
| XapI | RAATTY | 1 cut(s) | 15 |
| XmnI | GAANNNNTTC | 1 cut(s) | 19 |