Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0006991

Physical Location & Seq

Genomic Coordinates Reverse (-)

33030225 .. 33033608

Gene Structure 3384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G014200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGCTTTACCTTTGGCTGATTGGTCCAGCTCTAGGAAAAAAAAAAAAAAAAAAAAGAGGTCAAAACTCTTCTGGGGGCAAGATTCTTTGGCATAGCATGGAAATCTTTGCTGGTGTCTGTAGTAGTTCTCCTTGGTTAGTTATTGGTGACTTCAATGTTACTAGAAGATGTGAGGAAACTGCTGGTGGCAATAATCGTTTTAGTAATGCTATGAATGAGTTCAACTCTTGTCTTCATAATTCTGAGCTTGATGATCTTAACTACTCTGGTATTTACTATTCTTGGAGTAATAAGCAGGTTTATGGTAATTTTATTTCCAGAAAGTTGGACCGTTTCTTTAACTTCTTAGCTAATAGGGAAGATTTCCTTACAATTGTCTCCAATGTGTGGGCTACTAATGTTCCGGGATCTAAACAATTCCAAGTCTGTTGGAAGCTGAAACTTGTAAAGGACCAATTCAAGATCCTCAACCGCAACTCTATTGGCAATGTTTCGACCTTAGTTTCTAATTCCAAAGCAGCCTTAGATAACTGCCAGCGTTTGATGGATGCTGATCCTTTTGATGGCTCTTTGGGAATCCAAGAAAAAGCTCTCTGTAAATCTTATGCTAGTGCTCTTGCTACTGAAGAAAAGTTGTTGAAACAAAAGTCTAGAGTGCAATGGCTCAAGCATGGGGACAAAAACTCTGCTTTTTTCTTCAAGACCTTGACAAAGCATAGAAACAGGAATCGGATTGTTTCTATTAATCGCAGTGATGGGTTCTCTTTGGATAATTTGCATTTATTGGGGTTTAGTCCTATTAGTCCTGATCTTGCAAATTCTCTATGCCACAAATTCATGTATGATGATATTAAGGCAGTCTGTTTCTCTATGAATCCTAATAAGGCTCTGGGCCCAGATGGTTTTAACTGTTGCTTCTTTCAAAAGGCTTGGTCGATTATTGGTGAAGATGTTGTTGCTGCTGTTAAGGAATTTTTCTCTTCTGGTCTCCTCTTAAAGGAGTTAAATTCTACCATCATTACTCTTGTTCCTAAAGTGGCTAACCCCACTACTATGAGTGATTTCAGACCTATATCCTGCTGTAACACCTTATATAAAATTATTGCCAAATTGTTGGCGAATAGGCTAAAGGGCGTTCTTCATCTTATTGTTGGGCCTTCCCAATCTGCCTTCATTCCTGGGCGCAGAATTGGAGACAATATCCTTTTTGCTCAAGAACTCCTTCGTGATTACCATAAAGCTATTGGTCATCCTAGATGTACTCTTATGGTGGACATTATGAAAGCTTATGACACTGTTGAATGGGATTTCATTCTTGCGACCCTTGAAGCTTTTAATATTCCTCCCACTTTGATTAGCTGGATCAAGAGCTGCATTTCTTCCCCGAGATTTTCTGTGGCTGTTAATGGTGAACTGGCAGGTTTCTTTGCTAGCAAGCGGGGTTTAAGACAAGGTGACCCCTTGTCTCCCTACCTTTTTGTTATTGCTATGGAAGTCCTCTCTCTTTGTATTCATCGAAGAATAAATTGCTCGCCTTGTTTCCCAAAAATGCTTAAAATTAGGGTGCTTTGTCGATCTTTCTTTGCTAATATCATTGGTGATGGTCGTACTACTTCTTTGTGGTTTGATAATTGGCACCCTCTTGGTCCTCTTACTCTTAGATGGTCATCTAATATCATTGCTGATTCTGCTCTCTCTACCTCTGCCATGGTCAGTGATGTTATCTATAATAATAATTGGAGATGGCCTTCTCTCTCTCATGAGTTACTAGAGATTCGTGTTTCATTGACCCAAATCATTCCTAACTCTGAGGTTAGTGATTCTGTTCGATGGACTCTTTCTTCGAATGGGGTTTATTCTACTTCCTCTGCATGGAATGCCCTTCGTTTTTCTAGGCCTATTGTTCCTTGGTATCATTTAGTCTGGTTTGGTAGTTGTGTTCCTAGATGGAGCTTCATCTTATGGCTTGCTATTAGAGGAAGGTTATCAACTATGGATCGTGTAAGAATTTTTTTCTCCTCTTGCTGCCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04130 map04130

Pfam Domains

Protein Families

DUF4283 Exo_endo_phos RVT_1 zf-RVT

Protein Analysis

677

Amino Acids

76.57

Weight (kDa)

9.43

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	350 - 507	3e-28	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	619 - 669	2.7e-09	zinc-binding in reverse transcriptase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G40390 AT1G43760
fragaria_vesca	FvH4_2g05581 FvH4_3g29012
rosa_laevigata	RLG00000017307
rosa_multiflora	Rmu_sc0000447.1_g000013 Rmu_sc0000647.1_g000017 Rmu_sc0001616.1_g000010 Rmu_sc0004932.1_g000002 Rmu_sc0032291.1_g000001 Rmu_sc0035385.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031810
rosa_samantha	Rh3BG325500 Rh3BG325600 Rh3BG372000 Rh3BG372200 Rh4CG249400 Rh5CG378300 Rh6BG242500 Rh6CG069600 Rh6DG066600 Rh7CG451600 Rh7CG469200 Rh7DG357300
rosa_wichuraiana	Rw4G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	286, 1409
AccB1I	GGYRCC	1 cut(s)	1635
AccB7I	CCANNNNNTGG	1 cut(s)	387
AciI	CCGC	2 cut(s)	472, 1438
AclWI	GGATC	5 cut(s)	415, 457, 548, 1370, 2004
AcsI	RAATTY	5 cut(s)	817, 833, 971, 1006, 2007
AcuI	CTGAAG	1 cut(s)	645
AfaI	GTAC	2 cut(s)	1261, 1609
AfiI	CCNNNNNNNGG	5 cut(s)	32, 387, 563, 997, 1872
AgsI	TTSAA	8 cut(s)	154, 223, 460, 640, 700, 923, 1301, 1328
AhdI	GACNNNNNGTC	1 cut(s)	1462
AjnI	CCWGG	1 cut(s)	1177
Alw21I	GWGCWC	1 cut(s)	616
Alw26I	GTCTC	4 cut(s)	382, 992, 1188, 1470
AlwI	GGATC	5 cut(s)	415, 457, 548, 1370, 2004
Ama87I	CYCGRG	1 cut(s)	1384
AoxI	GGCC	4 cut(s)	892, 1154, 1745, 1895
ApaI	GGGCCC	1 cut(s)	896
ApeKI	GCWGC	4 cut(s)	518, 959, 1371, 2025
ApoI	RAATTY	5 cut(s)	817, 833, 971, 1006, 2007
ArsI	GACNNNNNNTTYG	2 cut(s)	1825, 1857
AseI	ATTAAT	1 cut(s)	744
Asp700I	GAANNNNTTC	2 cut(s)	218, 1221
AspLEI	GCGC	1 cut(s)	1185
AspS9I	GGNCC	7 cut(s)	23, 328, 451, 892, 893, 1154, 1646
AsuC2I	CCSGG	1 cut(s)	405
AsuHPI	GGTGA	5 cut(s)	158, 956, 1421, 1466, 1610
AsuII	TTCGAA	1 cut(s)	1844
AsuNHI	GCTAGC	1 cut(s)	1430
AvaI	CYCGRG	1 cut(s)	1384
AvaII	GGWCC	4 cut(s)	23, 328, 451, 1646
BaeGI	GKGCMC	1 cut(s)	896
BanI	GGYRCC	1 cut(s)	1635
BanII	GRGCYC	1 cut(s)	896
BbsI	GAAGAC	1 cut(s)	224
Bbv12I	GWGCWC	1 cut(s)	616
BbvI	GCAGC	4 cut(s)	530, 946, 1358, 2012
BciT130I	CCWGG	1 cut(s)	1179
BcnI	CCSGG	1 cut(s)	405
BcoDI	GTCTC	4 cut(s)	382, 992, 1188, 1470
BfaI	CTAG	9 cut(s)	32, 162, 609, 651, 1254, 1431, 1769, 1893, 1944
BfmI	CTRYAG	1 cut(s)	118
BfuAI	ACCTGC	2 cut(s)	286, 1409
BisI	GCNGC	4 cut(s)	519, 960, 1372, 2026
BlsI	GCNGC	4 cut(s)	520, 961, 1373, 2027
Bme1390I	CCNGG	2 cut(s)	405, 1179
Bme18I	GGWCC	4 cut(s)	23, 328, 451, 1646
BmeRI	GACNNNNNGTC	1 cut(s)	1462
BmeT110I	CYCGRG	1 cut(s)	1384
BmgT120I	GGNCC	7 cut(s)	23, 328, 451, 892, 893, 1154, 1646
BmiI	GGNNCC	2 cut(s)	894, 1637
BmrFI	CCNGG	2 cut(s)	405, 1179
BmsI	GCATC	1 cut(s)	538
BmtI	GCTAGC	1 cut(s)	1434
BpiI	GAAGAC	1 cut(s)	224
BplI	GAGNNNNNCTC	2 cut(s)	209, 241
Bpu14I	TTCGAA	1 cut(s)	1844
BpuEI	CTTGAG	2 cut(s)	650, 1197
BpuMI	CCSGG	1 cut(s)	405
BsaBI	GATNNNNATC	2 cut(s)	552, 1666
BsaI	GGTCTC	1 cut(s)	992
BsaJI	CCNNGG	4 cut(s)	131, 1178, 1707, 1907
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 387, 563, 997, 1872
Bse1I	ACTGG	1 cut(s)	1419
Bse3DI	GCAATG	3 cut(s)	493, 665, 1677
Bse8I	GATNNNNATC	2 cut(s)	552, 1666
BseBI	CCWGG	1 cut(s)	1179
BseDI	CCNNGG	4 cut(s)	131, 1178, 1707, 1907
BseGI	GGATG	2 cut(s)	553, 1249
BseJI	GATNNNNATC	2 cut(s)	552, 1666
BseLI	CCNNNNNNNGG	5 cut(s)	32, 387, 563, 997, 1872
BseMI	GCAATG	3 cut(s)	493, 665, 1677
BseMII	CTCAG	2 cut(s)	234, 1800
BseNI	ACTGG	1 cut(s)	1419
BseRI	GAGGAG	2 cut(s)	980, 2008
BseSI	GKGCMC	1 cut(s)	896
BseXI	GCAGC	4 cut(s)	530, 946, 1358, 2012
BshFI	GGCC	4 cut(s)	894, 1156, 1747, 1897
BshNI	GGYRCC	1 cut(s)	1635
BsiHKAI	GWGCWC	1 cut(s)	616
BsiHKCI	CYCGRG	1 cut(s)	1384
BsiSI	CCGG	1 cut(s)	404
BslFI	GGGAC	1 cut(s)	689
BslI	CCNNNNNNNGG	5 cut(s)	32, 387, 563, 997, 1872
BsmAI	GTCTC	4 cut(s)	382, 992, 1188, 1470
BsmFI	GGGAC	1 cut(s)	689
BsmI	GAATGC	1 cut(s)	1882
BsnI	GGCC	4 cut(s)	894, 1156, 1747, 1897
Bso31I	GGTCTC	1 cut(s)	992
BsoBI	CYCGRG	1 cut(s)	1384
Bsp119I	TTCGAA	1 cut(s)	1844
Bsp120I	GGGCCC	1 cut(s)	892
Bsp1286I	GDGCHC	2 cut(s)	616, 896
Bsp143I	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
Bsp19I	CCATGG	1 cut(s)	1707
BspACI	CCGC	2 cut(s)	472, 1438
BspANI	GGCC	4 cut(s)	894, 1156, 1747, 1897
BspCNI	CTCAG	2 cut(s)	235, 1801
BspHI	TCATGA	1 cut(s)	1759
BspLI	GGNNCC	2 cut(s)	894, 1637
BspMI	ACCTGC	2 cut(s)	286, 1409
BspOI	GCTAGC	1 cut(s)	1434
BspPI	GGATC	5 cut(s)	415, 457, 548, 1370, 2004
BspT104I	TTCGAA	1 cut(s)	1844
BspT107I	GGYRCC	1 cut(s)	1635
BspTNI	GGTCTC	1 cut(s)	992
BsrDI	GCAATG	3 cut(s)	493, 665, 1677
BsrI	ACTGG	1 cut(s)	1419
BssECI	CCNNGG	4 cut(s)	131, 1178, 1707, 1907
BssMI	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
BssT1I	CCWWGG	3 cut(s)	131, 1707, 1907
Bst2UI	CCWGG	1 cut(s)	1179
Bst4CI	ACNGT	3 cut(s)	332, 911, 1297
Bst6I	CTCTTC	2 cut(s)	73, 985
BstAPI	GCANNNNNTGC	1 cut(s)	1877
BstBI	TTCGAA	1 cut(s)	1844
BstC8I	GCNNGC	5 cut(s)	536, 1432, 1436, 1532, 1968
BstDEI	CTNAG	6 cut(s)	243, 346, 499, 523, 1658, 1809
BstDSI	CCRYGG	1 cut(s)	1707
BstEII	GGTNACC	1 cut(s)	1454
BstENI	CCTNNNNNAGG	1 cut(s)	995
BstF5I	GGATG	2 cut(s)	553, 1249
BstHHI	GCGC	1 cut(s)	1185
BstKTI	GATC	8 cut(s)	256, 410, 465, 556, 811, 1365, 1577, 1999
BstMAI	GTCTC	4 cut(s)	382, 992, 1188, 1470
BstMBI	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
BstMWI	GCNNNNNNNGC	2 cut(s)	1688, 1877
BstNI	CCWGG	1 cut(s)	1179
BstPI	GGTNACC	1 cut(s)	1454
BstSCI	CCNGG	2 cut(s)	403, 1177
BstSFI	CTRYAG	1 cut(s)	118
BstSLI	GKGCMC	1 cut(s)	896
BstV1I	GCAGC	4 cut(s)	530, 946, 1358, 2012
BstV2I	GAAGAC	1 cut(s)	224
BstX2I	RGATCY	2 cut(s)	407, 462
BstXI	CCANNNNNNTGG	2 cut(s)	325, 1114
BstYI	RGATCY	2 cut(s)	407, 462
BsuRI	GGCC	4 cut(s)	894, 1156, 1747, 1897
BtgI	CCRYGG	1 cut(s)	1707
BtsCI	GGATG	2 cut(s)	553, 1249
BtsI	GCAGTG	1 cut(s)	757
BtsIMutI	CAGTG	3 cut(s)	757, 1293, 1720
BveI	ACCTGC	2 cut(s)	286, 1409
Cac8I	GCNNGC	5 cut(s)	536, 1432, 1436, 1532, 1968
CciI	TCATGA	1 cut(s)	1759
CfoI	GCGC	1 cut(s)	1185
Cfr13I	GGNCC	7 cut(s)	23, 328, 451, 892, 893, 1154, 1646
Csp6I	GTAC	2 cut(s)	1260, 1608
CviAII	CATG	7 cut(s)	97, 671, 838, 1708, 1760, 1872, 2031
CviQI	GTAC	2 cut(s)	1260, 1608
DdeI	CTNAG	6 cut(s)	243, 346, 499, 523, 1658, 1809
DpnI	GATC	8 cut(s)	255, 409, 464, 555, 810, 1364, 1576, 1998
DpnII	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
DriI	GACNNNNNGTC	1 cut(s)	1462
Eam1104I	CTCTTC	2 cut(s)	73, 985
Eam1105I	GACNNNNNGTC	1 cut(s)	1462
EarI	CTCTTC	2 cut(s)	73, 985
Eco130I	CCWWGG	3 cut(s)	131, 1707, 1907
Eco147I	AGGCCT	1 cut(s)	1897
Eco24I	GRGCYC	1 cut(s)	896
Eco31I	GGTCTC	1 cut(s)	992
Eco47I	GGWCC	4 cut(s)	23, 328, 451, 1646
Eco57I	CTGAAG	1 cut(s)	645
Eco88I	CYCGRG	1 cut(s)	1384
Eco91I	GGTNACC	1 cut(s)	1454
EcoNI	CCTNNNNNAGG	1 cut(s)	995
EcoO65I	GGTNACC	1 cut(s)	1454
EcoRII	CCWGG	1 cut(s)	1177
EcoT14I	CCWWGG	3 cut(s)	131, 1707, 1907
EcoT38I	GRGCYC	1 cut(s)	896
ErhI	CCWWGG	3 cut(s)	131, 1707, 1907
FaeI	CATG	7 cut(s)	100, 674, 841, 1711, 1763, 1875, 2034
FalI	AAGNNNNNCTT	4 cut(s)	351, 383, 1206, 1238
FaqI	GGGAC	1 cut(s)	689
FatI	CATG	7 cut(s)	96, 670, 837, 1707, 1759, 1871, 2030
FauI	CCCGC	1 cut(s)	1431
Fnu4HI	GCNGC	4 cut(s)	519, 960, 1372, 2026
FokI	GGATG	2 cut(s)	560, 1236
FriOI	GRGCYC	1 cut(s)	896
Fsp4HI	GCNGC	4 cut(s)	519, 960, 1372, 2026
FspBI	CTAG	9 cut(s)	32, 162, 609, 651, 1254, 1431, 1769, 1893, 1944
GlaI	GCGC	1 cut(s)	1184
GluI	GCNGC	4 cut(s)	519, 960, 1372, 2026
HaeIII	GGCC	4 cut(s)	894, 1156, 1747, 1897
HapII	CCGG	1 cut(s)	404
HhaI	GCGC	1 cut(s)	1185
Hin1II	CATG	7 cut(s)	100, 674, 841, 1711, 1763, 1875, 2034
Hin6I	GCGC	1 cut(s)	1183
HinP1I	GCGC	1 cut(s)	1183
HindIII	AAGCTT	2 cut(s)	1284, 1329
HinfI	GANTC	8 cut(s)	82, 576, 727, 874, 1685, 1774, 1820, 1834
HpaII	CCGG	1 cut(s)	404
HphI	GGTGA	5 cut(s)	158, 956, 1421, 1466, 1610
Hpy166II	GTNNAC	2 cut(s)	1273, 1412
Hpy188I	TCNGA	4 cut(s)	244, 732, 1067, 1810
Hpy188III	TCNNGA	9 cut(s)	318, 460, 651, 700, 806, 1214, 1226, 1366, 1760
Hpy8I	GTNNAC	2 cut(s)	1273, 1412
HpyAV	CCTTC	6 cut(s)	1167, 1180, 1232, 1758, 1892, 1974
HpyCH4III	ACNGT	3 cut(s)	332, 911, 1297
HpyCH4V	TGCA	5 cut(s)	658, 778, 815, 1374, 1871
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1688, 1877
HpyF3I	CTNAG	6 cut(s)	243, 346, 499, 523, 1658, 1809
Hsp92II	CATG	7 cut(s)	100, 674, 841, 1711, 1763, 1875, 2034
HspAI	GCGC	1 cut(s)	1183
Kzo9I	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
LmnI	GCTCC	1 cut(s)	1950
Lsp1109I	GCAGC	4 cut(s)	530, 946, 1358, 2012
LweI	GCATC	1 cut(s)	538
MaeI	CTAG	9 cut(s)	32, 162, 609, 651, 1254, 1431, 1769, 1893, 1944
MaeIII	GTNAC	5 cut(s)	146, 157, 1082, 1454, 1764
MalI	GATC	8 cut(s)	255, 409, 464, 555, 810, 1364, 1576, 1998
MboI	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	2 cut(s)	407, 462
MhlI	GDGCHC	2 cut(s)	616, 896
MlyI	GAGTC	1 cut(s)	1828
MmeI	TCCRAC	2 cut(s)	306, 410
MroXI	GAANNNNTTC	2 cut(s)	218, 1221
MslI	CAYNNNNRTG	1 cut(s)	1052
MspI	CCGG	1 cut(s)	404
MspR9I	CCNGG	2 cut(s)	405, 1179
MunI	CAATTG	1 cut(s)	372
Mva1269I	GAATGC	1 cut(s)	1882
MvaI	CCWGG	1 cut(s)	1179
MwoI	GCNNNNNNNGC	2 cut(s)	1688, 1877
NciI	CCSGG	1 cut(s)	405
NcoI	CCATGG	1 cut(s)	1707
NdeII	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
NheI	GCTAGC	1 cut(s)	1430
NlaIII	CATG	7 cut(s)	100, 674, 841, 1711, 1763, 1875, 2034
NlaIV	GGNNCC	2 cut(s)	894, 1637
NmuCI	GTSAC	2 cut(s)	146, 1454
NspV	TTCGAA	1 cut(s)	1844
PagI	TCATGA	1 cut(s)	1759
PceI	AGGCCT	1 cut(s)	1897
PctI	GAATGC	1 cut(s)	1882
PdmI	GAANNNNTTC	2 cut(s)	218, 1221
PfeI	GAWTC	7 cut(s)	82, 576, 727, 874, 1685, 1774, 1820
PflMI	CCANNNNNTGG	1 cut(s)	387
PfoI	TCCNGGA	1 cut(s)	403
PkrI	GCNGC	4 cut(s)	520, 961, 1373, 2027
PleI	GAGTC	1 cut(s)	1828
PpsI	GAGTC	1 cut(s)	1828
PshBI	ATTAAT	1 cut(s)	744
Psp6I	CCWGG	1 cut(s)	1177
PspEI	GGTNACC	1 cut(s)	1454
PspGI	CCWGG	1 cut(s)	1177
PspN4I	GGNNCC	2 cut(s)	894, 1637
PspOMI	GGGCCC	1 cut(s)	892
PspPI	GGNCC	7 cut(s)	23, 328, 451, 892, 893, 1154, 1646
PsuI	RGATCY	2 cut(s)	407, 462
RsaI	GTAC	2 cut(s)	1261, 1609
RsaNI	GTAC	2 cut(s)	1260, 1608
RseI	CAYNNNNRTG	1 cut(s)	1052
SatI	GCNGC	4 cut(s)	519, 960, 1372, 2026
Sau3AI	GATC	8 cut(s)	253, 407, 462, 553, 808, 1362, 1574, 1996
Sau96I	GGNCC	7 cut(s)	23, 328, 451, 892, 893, 1154, 1646
SchI	GAGTC	1 cut(s)	1828
ScrFI	CCNGG	2 cut(s)	405, 1179
SduI	GDGCHC	2 cut(s)	616, 896
SfaNI	GCATC	1 cut(s)	538
SfcI	CTRYAG	1 cut(s)	118
SfuI	TTCGAA	1 cut(s)	1844
SinI	GGWCC	4 cut(s)	23, 328, 451, 1646
SmiMI	CAYNNNNRTG	1 cut(s)	1052
SmlI	CTYRAG	2 cut(s)	665, 1212
SmoI	CTYRAG	2 cut(s)	665, 1212
SseBI	AGGCCT	1 cut(s)	1897
SsiI	CCGC	2 cut(s)	472, 1438
SspI	AATATT	1 cut(s)	1339
SspMI	CTAG	9 cut(s)	32, 162, 609, 651, 1254, 1431, 1769, 1893, 1944
StuI	AGGCCT	1 cut(s)	1897
StyD4I	CCNGG	2 cut(s)	403, 1177
StyI	CCWWGG	3 cut(s)	131, 1707, 1907
TaaI	ACNGT	3 cut(s)	332, 911, 1297
TaqI	TCGA	6 cut(s)	494, 935, 1516, 1573, 1828, 1844
TatI	WGTACW	1 cut(s)	1259
TfiI	GAWTC	7 cut(s)	82, 576, 727, 874, 1685, 1774, 1820
TscAI	CASTG	3 cut(s)	757, 1300, 1720
TseFI	GTSAC	2 cut(s)	146, 1454
TseI	GCWGC	4 cut(s)	518, 959, 1371, 2025
Tsp45I	GTSAC	2 cut(s)	146, 1454
TspRI	CASTG	3 cut(s)	757, 1300, 1720
Van91I	CCANNNNNTGG	1 cut(s)	387
VpaK11BI	GGWCC	4 cut(s)	23, 328, 451, 1646
VspI	ATTAAT	1 cut(s)	744
XagI	CCTNNNNNAGG	1 cut(s)	995
XapI	RAATTY	5 cut(s)	817, 833, 971, 1006, 2007
XbaI	TCTAGA	1 cut(s)	650
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1241
XmnI	GAANNNNTTC	2 cut(s)	218, 1221
XspI	CTAG	9 cut(s)	32, 162, 609, 651, 1254, 1431, 1769, 1893, 1944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.