ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G40390 AT1G43760 |
| fragaria_vesca | FvH4_2g05581 FvH4_3g29012 |
| rosa_laevigata | RLG00000017307 |
| rosa_multiflora | Rmu_sc0000447.1_g000013 Rmu_sc0000647.1_g000017 Rmu_sc0001616.1_g000010 Rmu_sc0004932.1_g000002 Rmu_sc0032291.1_g000001 Rmu_sc0035385.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00031810 |
| rosa_samantha | Rh3BG325500 Rh3BG325600 Rh3BG372000 Rh3BG372200 Rh4CG249400 Rh5CG378300 Rh6BG242500 Rh6CG069600 Rh6DG066600 Rh7CG451600 Rh7CG469200 Rh7DG357300 |
| rosa_wichuraiana | Rw4G014200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 267 |
| AciI | CCGC | 2 cut(s) | 280, 343 |
| AclWI | GGATC | 2 cut(s) | 12, 361 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AgsI | TTSAA | 1 cut(s) | 322 |
| AluBI | AGCT | 3 cut(s) | 232, 245, 390 |
| AluI | AGCT | 3 cut(s) | 232, 245, 390 |
| Alw26I | GTCTC | 2 cut(s) | 62, 403 |
| AlwI | GGATC | 2 cut(s) | 12, 361 |
| ApeKI | GCWGC | 6 cut(s) | 32, 59, 166, 185, 188, 245 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 109, 141 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 19 |
| AspLEI | GCGC | 1 cut(s) | 267 |
| BbvI | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| BccI | CCATC | 1 cut(s) | 87 |
| BcoDI | GTCTC | 2 cut(s) | 62, 403 |
| BfmI | CTRYAG | 1 cut(s) | 246 |
| BisI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| BlsI | GCNGC | 6 cut(s) | 34, 61, 168, 187, 190, 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 136, 168 |
| Bse1I | ACTGG | 1 cut(s) | 200 |
| Bse3DI | GCAATG | 1 cut(s) | 236 |
| BseMI | GCAATG | 1 cut(s) | 236 |
| BseNI | ACTGG | 1 cut(s) | 200 |
| BseRI | GAGGAG | 1 cut(s) | 15 |
| BseXI | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| Bsh1236I | CGCG | 1 cut(s) | 267 |
| BsmAI | GTCTC | 2 cut(s) | 62, 403 |
| Bsp143I | GATC | 2 cut(s) | 4, 366 |
| BspACI | CCGC | 2 cut(s) | 280, 343 |
| BspFNI | CGCG | 1 cut(s) | 267 |
| BspHI | TCATGA | 1 cut(s) | 400 |
| BspMAI | CTGCAG | 1 cut(s) | 250 |
| BspPI | GGATC | 2 cut(s) | 12, 361 |
| BsrDI | GCAATG | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 200 |
| BssMI | GATC | 2 cut(s) | 4, 366 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 2 cut(s) | 234, 243 |
| BstFNI | CGCG | 1 cut(s) | 267 |
| BstHHI | GCGC | 1 cut(s) | 267 |
| BstKTI | GATC | 2 cut(s) | 7, 369 |
| BstMAI | GTCTC | 2 cut(s) | 62, 403 |
| BstMBI | GATC | 2 cut(s) | 4, 366 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 238, 242, 254 |
| BstSFI | CTRYAG | 1 cut(s) | 246 |
| BstUI | CGCG | 1 cut(s) | 267 |
| BstV1I | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| BstX2I | RGATCY | 1 cut(s) | 366 |
| BstYI | RGATCY | 1 cut(s) | 366 |
| Cac8I | GCNNGC | 2 cut(s) | 234, 243 |
| CciI | TCATGA | 1 cut(s) | 400 |
| CfoI | GCGC | 1 cut(s) | 267 |
| CviAII | CATG | 4 cut(s) | 38, 180, 340, 401 |
| CviJI | RGCY | 4 cut(s) | 232, 245, 300, 390 |
| CviKI_1 | RGCY | 4 cut(s) | 232, 245, 300, 390 |
| DpnI | GATC | 2 cut(s) | 6, 368 |
| DpnII | GATC | 2 cut(s) | 4, 366 |
| FaeI | CATG | 4 cut(s) | 41, 183, 343, 404 |
| FaiI | YATR | 8 cut(s) | 39, 102, 181, 255, 341, 349, 393, 402 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 289, 321 |
| FatI | CATG | 4 cut(s) | 37, 179, 339, 400 |
| Fnu4HI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| Fsp4HI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| GlaI | GCGC | 1 cut(s) | 266 |
| GluI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| HhaI | GCGC | 1 cut(s) | 267 |
| Hin1II | CATG | 4 cut(s) | 41, 183, 343, 404 |
| Hin6I | GCGC | 1 cut(s) | 265 |
| HinP1I | GCGC | 1 cut(s) | 265 |
| HinfI | GANTC | 4 cut(s) | 70, 118, 335, 411 |
| Hpy188III | TCNNGA | 1 cut(s) | 401 |
| HpyAV | CCTTC | 4 cut(s) | 193, 315, 384, 390 |
| HpyCH4V | TGCA | 3 cut(s) | 221, 241, 248 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 238, 242, 254 |
| Hsp92II | CATG | 4 cut(s) | 41, 183, 343, 404 |
| HspAI | GCGC | 1 cut(s) | 265 |
| Kzo9I | GATC | 2 cut(s) | 4, 366 |
| LpnPI | CCDG | 4 cut(s) | 93, 181, 218, 247 |
| Lsp1109I | GCAGC | 6 cut(s) | 19, 46, 172, 175, 178, 232 |
| MalI | GATC | 2 cut(s) | 6, 368 |
| MboI | GATC | 2 cut(s) | 4, 366 |
| MboII | GAAGA | 1 cut(s) | 376 |
| MfeI | CAATTG | 1 cut(s) | 327 |
| MflI | RGATCY | 1 cut(s) | 366 |
| MluCI | AATT | 2 cut(s) | 15, 327 |
| MlyI | GAGTC | 4 cut(s) | 64, 112, 344, 405 |
| MnlI | CCTC | 5 cut(s) | 36, 115, 162, 311, 381 |
| MroXI | GAANNNNTTC | 1 cut(s) | 19 |
| MseI | TTAA | 2 cut(s) | 291, 421 |
| MslI | CAYNNNNRTG | 1 cut(s) | 42 |
| MunI | CAATTG | 1 cut(s) | 327 |
| MvnI | CGCG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 238, 242, 254 |
| NdeII | GATC | 2 cut(s) | 4, 366 |
| NlaIII | CATG | 4 cut(s) | 41, 183, 343, 404 |
| PagI | TCATGA | 1 cut(s) | 400 |
| PdmI | GAANNNNTTC | 1 cut(s) | 19 |
| PkrI | GCNGC | 6 cut(s) | 34, 61, 168, 187, 190, 247 |
| PleI | GAGTC | 4 cut(s) | 64, 112, 343, 405 |
| PpsI | GAGTC | 4 cut(s) | 64, 112, 343, 405 |
| PstI | CTGCAG | 1 cut(s) | 250 |
| PsuI | RGATCY | 1 cut(s) | 366 |
| RseI | CAYNNNNRTG | 1 cut(s) | 42 |
| SaqAI | TTAA | 2 cut(s) | 291, 421 |
| SatI | GCNGC | 6 cut(s) | 33, 60, 167, 186, 189, 246 |
| Sau3AI | GATC | 2 cut(s) | 4, 366 |
| SchI | GAGTC | 4 cut(s) | 64, 112, 344, 405 |
| SetI | ASST | 4 cut(s) | 107, 234, 247, 392 |
| SfcI | CTRYAG | 1 cut(s) | 246 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 42 |
| Sse9I | AATT | 2 cut(s) | 15, 327 |
| SsiI | CCGC | 2 cut(s) | 280, 343 |
| TasI | AATT | 2 cut(s) | 15, 327 |
| Tru1I | TTAA | 2 cut(s) | 291, 421 |
| Tru9I | TTAA | 2 cut(s) | 291, 421 |
| TseI | GCWGC | 6 cut(s) | 32, 59, 166, 185, 188, 245 |
| TspDTI | ATGAA | 4 cut(s) | 54, 163, 389, 417 |
| XapI | RAATTY | 1 cut(s) | 15 |
| XmnI | GAANNNNTTC | 1 cut(s) | 19 |