Rmu_ssc0000007.1_g000024

Cell number regulator 6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000007.1
Physical Location & Seq
Forward (+)
123802 .. 127410
3609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000007.1_g000024.1.cds

Sequence Viewer

Length: 1392 bp
atgaatgactcggtagacaagctagtgatcttcctagcaaagagagatggcatagacaagcttgtcaagacgttccaatatgtctccaagcttgtgcactggcataccgagtccactaacccgaagatggcagagagattcaagcagtgggaggtttcgtctggccttagccgaaaggcttttcggactggcaggttcctcaccggattcaatgcaatgagacgaagccctggatcaacgccaactcttcggttcttggctgttcttgctaatgctggtgagatgatatacttctttttcgaccattttctttggttgtcaaaaattgggactttggacccaagtttggctagaaagatgagcttcatttccgcatttggtgagtcctttgggtacattttcttcattatatctgattttatcgcgctaaaagaagggcttgaggaagagaggaaggttatgagtttggaggacaagtccattgagaagaagaatgagagcataagaaagattagaagtgatagagtgatgaggttaatggctgtagcagctaatgttgcagacttgcttattgcaattgctgatatcgagcctaatccattctgcaaccacactgtgactcttgggatcagtggattggtctctgcttggtccgatcagatggcggacggaagcggtcactcgcgctatgtgaagctgacgaaagatcaagcgccgctgcaggaggacattaagcccggcgagctcaatcagcccatcgatgttcctcagttgaatgttaagaagtgtcatgagtgtggacaacctttaccggaaagctttcagcccccggctgatgaaccttggacgactggaatttttggctgcagtgaagatagagacagttgcttgacaggactattttgtccctgtgttcagtttgggcgtaatattgaaaacttaagagatgatgtgccatggaccacaccatgcatttgtcatgccgtttttgttgaaggtggcatggctgttgcagcaggaactgcaatcttccatggtgttgacccaagaacttcatttcttatctgcgagggtctgttgtttgcatggtggatgtgtggagtgtatacaggtcttgttcggcaatccttgcagaaaaagtatcatcttaagaactcgccatgtgacccttgcttggtgcactgctgcctgcactggtgtgccttgtgtcaggagcacagggagatgaagggtcgcctttcagaaaattctgcgatgccaatgacagttgtcaaccctcctcctgttcaacagatgaacaaacctgctgatgacaacagcaaccaggactctgctgcaccatcctctactaccaacgatgggcatactaatatggaaatgcaggcattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

463

Amino Acids

51.79

Weight (kDa)

6.24

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 62, 903
Acc36I ACCTGC 2 cut(s) 183, 1312
AccI GTMKAC 2 cut(s) 15, 1106
AccII CGCG 2 cut(s) 425, 685
AciI CCGC 4 cut(s) 372, 665, 675, 716
AclWI GGATC 2 cut(s) 241, 635
AcsI RAATTY 2 cut(s) 855, 1246
AdeI CACNNNGTG 1 cut(s) 616
AfaI GTAC 1 cut(s) 395
AfiI CCNNNNNNNGG 4 cut(s) 127, 346, 1174, 1359
AflII CTTAAG 2 cut(s) 940, 1148
AgsI TTSAA 6 cut(s) 142, 211, 775, 935, 995, 1289
AjnI CCWGG 2 cut(s) 229, 1323
AleI CACNNNNGTG 1 cut(s) 1197
AluBI AGCT 8 cut(s) 22, 61, 91, 363, 551, 697, 745, 819
AluI AGCT 8 cut(s) 22, 61, 91, 363, 551, 697, 745, 819
Alw21I GWGCWC 4 cut(s) 99, 747, 1182, 1218
Alw26I GTCTC 4 cut(s) 88, 214, 646, 873
Alw44I GTGCAC 2 cut(s) 95, 1178
AlwI GGATC 2 cut(s) 241, 635
AlwNI CAGNNNCTG 1 cut(s) 1022
AoxI GGCC 1 cut(s) 163
ApaLI GTGCAC 2 cut(s) 95, 1178
ApeKI GCWGC 6 cut(s) 548, 718, 864, 1013, 1185, 1334
ApoI RAATTY 2 cut(s) 855, 1246
Asp700I GAANNNNTTC 1 cut(s) 819
AspLEI GCGC 3 cut(s) 427, 687, 715
AspS9I GGNCC 3 cut(s) 337, 651, 960
AsuC2I CCSGG 2 cut(s) 738, 830
AsuHPI GGTGA 3 cut(s) 193, 290, 392
AvaII GGWCC 3 cut(s) 337, 651, 960
BaeGI GKGCMC 2 cut(s) 99, 1182
BanII GRGCYC 1 cut(s) 747
BarI GAAGNNNNNNTAC 2 cut(s) 386, 418
Bbv12I GWGCWC 4 cut(s) 99, 747, 1182, 1218
BbvI GCAGC 6 cut(s) 560, 705, 851, 1025, 1172, 1321
BccI CCATC 6 cut(s) 41, 121, 655, 764, 1348, 1352
BceAI ACGGC 1 cut(s) 968
BciT130I CCWGG 2 cut(s) 231, 1325
BcnI CCSGG 2 cut(s) 738, 830
BcoDI GTCTC 4 cut(s) 88, 214, 646, 873
BfaI CTAG 3 cut(s) 23, 35, 351
BfmI CTRYAG 3 cut(s) 543, 719, 865
BfoI RGCGCY 1 cut(s) 716
BfrI CTTAAG 2 cut(s) 940, 1148
BfuAI ACCTGC 2 cut(s) 183, 1312
BisI GCNGC 7 cut(s) 549, 716, 719, 865, 1014, 1186, 1335
BlsI GCNGC 7 cut(s) 550, 717, 720, 866, 1015, 1187, 1336
Bme1390I CCNGG 4 cut(s) 231, 738, 830, 1325
Bme18I GGWCC 3 cut(s) 337, 651, 960
BmgT120I GGNCC 3 cut(s) 337, 651, 960
BmiI GGNNCC 2 cut(s) 197, 339
BmrFI CCNGG 4 cut(s) 231, 738, 830, 1325
BmsI GCATC 1 cut(s) 1245
BoxI GACNNNNGTC 1 cut(s) 1268
Bpu10I CCTNAGC 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 461
BpuMI CCSGG 2 cut(s) 738, 830
Bsa29I ATCGAT 1 cut(s) 759
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 5 cut(s) 229, 828, 842, 956, 1033
BsaWI WCCGGW 2 cut(s) 203, 811
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 461, 491
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 346, 1174, 1359
Bse1I ACTGG 4 cut(s) 104, 193, 856, 1199
Bse3DI GCAATG 1 cut(s) 222
BseBI CCWGG 2 cut(s) 231, 1325
BseCI ATCGAT 1 cut(s) 759
BseDI CCNNGG 5 cut(s) 229, 828, 842, 956, 1033
BseGI GGATG 2 cut(s) 1098, 1340
BseLI CCNNNNNNNGG 4 cut(s) 127, 346, 1174, 1359
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 1 cut(s) 782
BseNI ACTGG 4 cut(s) 104, 193, 856, 1199
BseRI GAGGAG 1 cut(s) 1269
BseSI GKGCMC 2 cut(s) 99, 1182
BseXI GCAGC 6 cut(s) 560, 705, 851, 1025, 1172, 1321
BsgI GTGCAG 2 cut(s) 1175, 1320
Bsh1236I CGCG 2 cut(s) 425, 685
BshFI GGCC 1 cut(s) 165
BshVI ATCGAT 1 cut(s) 759
BsiHKAI GWGCWC 4 cut(s) 99, 747, 1182, 1218
BsiSI CCGG 4 cut(s) 204, 738, 812, 830
BslFI GGGAC 2 cut(s) 343, 891
BslI CCNNNNNNNGG 4 cut(s) 127, 346, 1174, 1359
BsmAI GTCTC 4 cut(s) 88, 214, 646, 873
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 2 cut(s) 343, 891
BsnI GGCC 1 cut(s) 165
Bso31I GGTCTC 1 cut(s) 646
Bsp1286I GDGCHC 4 cut(s) 99, 747, 1182, 1218
Bsp143I GATC 5 cut(s) 27, 233, 627, 655, 706
Bsp19I CCATGG 2 cut(s) 956, 1033
BspACI CCGC 4 cut(s) 372, 665, 675, 716
BspANI GGCC 1 cut(s) 165
BspCNI CTCAG 1 cut(s) 781
BspDI ATCGAT 1 cut(s) 759
BspFNI CGCG 2 cut(s) 425, 685
BspHI TCATGA 1 cut(s) 790
BspLI GGNNCC 2 cut(s) 197, 339
BspMAI CTGCAG 2 cut(s) 723, 869
BspMI ACCTGC 2 cut(s) 183, 1312
BspPI GGATC 2 cut(s) 241, 635
BspTI CTTAAG 2 cut(s) 940, 1148
BspTNI GGTCTC 1 cut(s) 646
BsrDI GCAATG 1 cut(s) 222
BsrI ACTGG 4 cut(s) 104, 193, 856, 1199
BssECI CCNNGG 5 cut(s) 229, 828, 842, 956, 1033
BssMI GATC 5 cut(s) 27, 233, 627, 655, 706
BssNAI GTATAC 1 cut(s) 1107
BssT1I CCWWGG 3 cut(s) 842, 956, 1033
Bst1107I GTATAC 1 cut(s) 1107
Bst2UI CCWGG 2 cut(s) 231, 1325
Bst4CI ACNGT 3 cut(s) 616, 884, 1267
Bst6I CTCTTC 2 cut(s) 252, 441
BstAFI CTTAAG 2 cut(s) 940, 1148
BstAPI GCANNNNNTGC 2 cut(s) 1022, 1129
BstC8I GCNNGC 3 cut(s) 743, 1190, 1383
BstDEI CTNAG 2 cut(s) 167, 768
BstDSI CCRYGG 2 cut(s) 956, 1033
BstF5I GGATG 2 cut(s) 1098, 1340
BstFNI CGCG 2 cut(s) 425, 685
BstH2I RGCGCY 1 cut(s) 716
BstHHI GCGC 3 cut(s) 427, 687, 715
BstKTI GATC 5 cut(s) 30, 236, 630, 658, 709
BstMAI GTCTC 4 cut(s) 88, 214, 646, 873
BstMBI GATC 5 cut(s) 27, 233, 627, 655, 706
BstMWI GCNNNNNNNGC 8 cut(s) 266, 548, 557, 742, 751, 1013, 1022, 1129
BstNI CCWGG 2 cut(s) 231, 1325
BstPAI GACNNNNGTC 1 cut(s) 1268
BstSCI CCNGG 4 cut(s) 229, 736, 828, 1323
BstSFI CTRYAG 3 cut(s) 543, 719, 865
BstSLI GKGCMC 2 cut(s) 99, 1182
BstUI CGCG 2 cut(s) 425, 685
BstV1I GCAGC 6 cut(s) 560, 705, 851, 1025, 1172, 1321
BstZ17I GTATAC 1 cut(s) 1107
Bsu15I ATCGAT 1 cut(s) 759
BsuRI GGCC 1 cut(s) 165
BsuTUI ATCGAT 1 cut(s) 759
BtgI CCRYGG 2 cut(s) 956, 1033
BtgZI GCGATG 1 cut(s) 1268
BtsCI GGATG 2 cut(s) 1098, 1340
BtsI GCAGTG 3 cut(s) 152, 874, 1180
BtsIMutI CAGTG 7 cut(s) 97, 152, 612, 637, 874, 1180, 1192
BveI ACCTGC 2 cut(s) 183, 1312
Cac8I GCNNGC 3 cut(s) 743, 1190, 1383
CaiI CAGNNNCTG 1 cut(s) 1022
CciI TCATGA 1 cut(s) 790
CfoI GCGC 3 cut(s) 427, 687, 715
Cfr13I GGNCC 3 cut(s) 337, 651, 960
ClaI ATCGAT 1 cut(s) 759
Csp6I GTAC 1 cut(s) 394
CviAII CATG 8 cut(s) 791, 957, 969, 980, 1003, 1034, 1086, 1161
CviQI GTAC 1 cut(s) 394
DdeI CTNAG 2 cut(s) 167, 768
DpnI GATC 5 cut(s) 29, 235, 629, 657, 708
DpnII GATC 5 cut(s) 27, 233, 627, 655, 706
DraIII CACNNNGTG 1 cut(s) 616
DrdI GACNNNNNNGTC 2 cut(s) 62, 903
DseDI GACNNNNNNGTC 2 cut(s) 62, 903
Eam1104I CTCTTC 2 cut(s) 252, 441
EarI CTCTTC 2 cut(s) 252, 441
EciI GGCGGA 1 cut(s) 680
Ecl136II GAGCTC 1 cut(s) 745
Eco130I CCWWGG 3 cut(s) 842, 956, 1033
Eco24I GRGCYC 1 cut(s) 747
Eco31I GGTCTC 1 cut(s) 646
Eco32I GATATC 1 cut(s) 586
Eco47I GGWCC 3 cut(s) 337, 651, 960
Eco53kI GAGCTC 1 cut(s) 745
EcoICRI GAGCTC 1 cut(s) 745
EcoRII CCWGG 2 cut(s) 229, 1323
EcoRV GATATC 1 cut(s) 586
EcoT14I CCWWGG 3 cut(s) 842, 956, 1033
EcoT22I ATGCAT 1 cut(s) 974
EcoT38I GRGCYC 1 cut(s) 747
ErhI CCWWGG 3 cut(s) 842, 956, 1033
Esp3I CGTCTC 1 cut(s) 214
FaeI CATG 8 cut(s) 794, 960, 972, 983, 1006, 1037, 1089, 1164
FalI AAGNNNNNCTT 4 cut(s) 347, 379, 423, 455
FaqI GGGAC 2 cut(s) 343, 891
FatI CATG 8 cut(s) 790, 956, 968, 979, 1002, 1033, 1085, 1160
FblI GTMKAC 2 cut(s) 15, 1106
Fnu4HI GCNGC 7 cut(s) 549, 716, 719, 865, 1014, 1186, 1335
FokI GGATG 2 cut(s) 1105, 1327
FriOI GRGCYC 1 cut(s) 747
Fsp4HI GCNGC 7 cut(s) 549, 716, 719, 865, 1014, 1186, 1335
FspBI CTAG 3 cut(s) 23, 35, 351
GlaI GCGC 3 cut(s) 426, 686, 714
GluI GCNGC 7 cut(s) 549, 716, 719, 865, 1014, 1186, 1335
HaeII RGCGCY 1 cut(s) 716
HaeIII GGCC 1 cut(s) 165
HapII CCGG 4 cut(s) 204, 738, 812, 830
HhaI GCGC 3 cut(s) 427, 687, 715
Hin1II CATG 8 cut(s) 794, 960, 972, 983, 1006, 1037, 1089, 1164
Hin6I GCGC 3 cut(s) 425, 685, 713
HinP1I GCGC 3 cut(s) 425, 685, 713
HincII GTYRAC 2 cut(s) 1042, 1273
HindII GTYRAC 2 cut(s) 1042, 1273
HindIII AAGCTT 3 cut(s) 59, 89, 817
HinfI GANTC 7 cut(s) 8, 110, 138, 207, 383, 619, 1328
HpaII CCGG 4 cut(s) 204, 738, 812, 830
HphI GGTGA 3 cut(s) 193, 290, 392
Hpy166II GTNNAC 8 cut(s) 16, 97, 114, 800, 1042, 1107, 1180, 1273
Hpy188I TCNGA 5 cut(s) 186, 415, 655, 660, 1243
Hpy188III TCNNGA 3 cut(s) 67, 791, 1211
Hpy8I GTNNAC 8 cut(s) 16, 97, 114, 800, 1042, 1107, 1180, 1273
HpyAV CCTTC 4 cut(s) 428, 448, 989, 1222
HpyCH4III ACNGT 3 cut(s) 616, 884, 1267
HpyCH4IV ACGT 1 cut(s) 71
HpyF10VI GCNNNNNNNGC 8 cut(s) 266, 548, 557, 742, 751, 1013, 1022, 1129
HpyF3I CTNAG 2 cut(s) 167, 768
HpySE526I ACGT 1 cut(s) 71
Hsp92II CATG 8 cut(s) 794, 960, 972, 983, 1006, 1037, 1089, 1164
HspAI GCGC 3 cut(s) 425, 685, 713
Kzo9I GATC 5 cut(s) 27, 233, 627, 655, 706
LmnI GCTCC 1 cut(s) 1213
Lsp1109I GCAGC 6 cut(s) 560, 705, 851, 1025, 1172, 1321
LweI GCATC 1 cut(s) 1245
MaeI CTAG 3 cut(s) 23, 35, 351
MaeII ACGT 1 cut(s) 71
MaeIII GTNAC 3 cut(s) 616, 677, 1163
MalI GATC 5 cut(s) 29, 235, 629, 657, 708
MboI GATC 5 cut(s) 27, 233, 627, 655, 706
MboII GAAGA 9 cut(s) 22, 136, 239, 394, 458, 499, 502, 884, 1021
MfeI CAATTG 1 cut(s) 576
MhlI GDGCHC 4 cut(s) 99, 747, 1182, 1218
MluCI AATT 4 cut(s) 324, 576, 855, 1246
MlyI GAGTC 5 cut(s) 2, 119, 392, 613, 1322
Mph1103I ATGCAT 1 cut(s) 974
MroXI GAANNNNTTC 1 cut(s) 819
MseI TTAA 5 cut(s) 536, 732, 780, 941, 1149
MslI CAYNNNNRTG 2 cut(s) 795, 1197
MspA1I CMGCKG 1 cut(s) 718
MspCI CTTAAG 2 cut(s) 940, 1148
MspI CCGG 4 cut(s) 204, 738, 812, 830
MspR9I CCNGG 4 cut(s) 231, 738, 830, 1325
MunI CAATTG 1 cut(s) 576
MvaI CCWGG 2 cut(s) 231, 1325
MvnI CGCG 2 cut(s) 425, 685
MwoI GCNNNNNNNGC 8 cut(s) 266, 548, 557, 742, 751, 1013, 1022, 1129
NciI CCSGG 2 cut(s) 738, 830
NcoI CCATGG 2 cut(s) 956, 1033
NdeII GATC 5 cut(s) 27, 233, 627, 655, 706
NlaIII CATG 8 cut(s) 794, 960, 972, 983, 1006, 1037, 1089, 1164
NlaIV GGNNCC 2 cut(s) 197, 339
NmuCI GTSAC 3 cut(s) 616, 677, 1163
NsiI ATGCAT 1 cut(s) 974
OliI CACNNNNGTG 1 cut(s) 1197
PagI TCATGA 1 cut(s) 790
PdmI GAANNNNTTC 1 cut(s) 819
PfeI GAWTC 2 cut(s) 138, 207
PkrI GCNGC 7 cut(s) 550, 717, 720, 866, 1015, 1187, 1336
PleI GAGTC 5 cut(s) 2, 118, 391, 613, 1322
PpsI GAGTC 5 cut(s) 2, 118, 391, 613, 1322
PshAI GACNNNNGTC 1 cut(s) 1268
Psp124BI GAGCTC 1 cut(s) 747
Psp6I CCWGG 2 cut(s) 229, 1323
PspGI CCWGG 2 cut(s) 229, 1323
PspN4I GGNNCC 2 cut(s) 197, 339
PspPI GGNCC 3 cut(s) 337, 651, 960
PstI CTGCAG 2 cut(s) 723, 869
PstNI CAGNNNCTG 1 cut(s) 1022
RsaI GTAC 1 cut(s) 395
RsaNI GTAC 1 cut(s) 394
RseI CAYNNNNRTG 2 cut(s) 795, 1197
SacI GAGCTC 1 cut(s) 747
SaqAI TTAA 5 cut(s) 536, 732, 780, 941, 1149
SatI GCNGC 7 cut(s) 549, 716, 719, 865, 1014, 1186, 1335
Sau3AI GATC 5 cut(s) 27, 233, 627, 655, 706
Sau96I GGNCC 3 cut(s) 337, 651, 960
SchI GAGTC 5 cut(s) 2, 119, 392, 613, 1322
ScrFI CCNGG 4 cut(s) 231, 738, 830, 1325
SduI GDGCHC 4 cut(s) 99, 747, 1182, 1218
SfaNI GCATC 1 cut(s) 1245
SfcI CTRYAG 3 cut(s) 543, 719, 865
SinI GGWCC 3 cut(s) 337, 651, 960
SmiMI CAYNNNNRTG 2 cut(s) 795, 1197
SmlI CTYRAG 3 cut(s) 440, 940, 1148
SmoI CTYRAG 3 cut(s) 440, 940, 1148
Sse9I AATT 4 cut(s) 324, 576, 855, 1246
SsiI CCGC 4 cut(s) 372, 665, 675, 716
SspI AATATT 1 cut(s) 931
SspMI CTAG 3 cut(s) 23, 35, 351
SstI GAGCTC 1 cut(s) 747
StyD4I CCNGG 4 cut(s) 229, 736, 828, 1323
StyI CCWWGG 3 cut(s) 842, 956, 1033
TaaI ACNGT 3 cut(s) 616, 884, 1267
TaiI ACGT 1 cut(s) 74
TaqI TCGA 3 cut(s) 300, 588, 759
TasI AATT 4 cut(s) 324, 576, 855, 1246
TauI GCSGC 1 cut(s) 718
TfiI GAWTC 2 cut(s) 138, 207
Tru1I TTAA 5 cut(s) 536, 732, 780, 941, 1149
Tru9I TTAA 5 cut(s) 536, 732, 780, 941, 1149
TscAI CASTG 7 cut(s) 104, 152, 619, 637, 874, 1187, 1199
TseFI GTSAC 3 cut(s) 616, 677, 1163
TseI GCWGC 6 cut(s) 548, 718, 864, 1013, 1185, 1334
Tsp45I GTSAC 3 cut(s) 616, 677, 1163
TspDTI ATGAA 7 cut(s) 17, 355, 394, 852, 1044, 1241, 1310
TspGWI ACGGA 1 cut(s) 684
TspRI CASTG 7 cut(s) 104, 152, 619, 637, 874, 1187, 1199
Vha464I CTTAAG 2 cut(s) 940, 1148
VneI GTGCAC 2 cut(s) 95, 1178
VpaK11BI GGWCC 3 cut(s) 337, 651, 960
XapI RAATTY 2 cut(s) 855, 1246
XmiI GTMKAC 2 cut(s) 15, 1106
XmnI GAANNNNTTC 1 cut(s) 819
XspI CTAG 3 cut(s) 23, 35, 351
Zsp2I ATGCAT 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.