Rmu_ssc0000210.1_g000002

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000210.1
OG0006247
Physical Location & Seq
Forward (+)
23250 .. 28117
4868 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3627 bp
atggagaagcggctccgctcctctctccaatcctccgccgaagagtttctgacctccgccaccaagctcagcctcaaatcctcaaagccctctctcaaaaccctaatccacaaaatcaaaccctcctccgacctctcctcctctctccccatctctctctcccactccatttccgacgccatccgctccttccagacccttcttctgcaacccaaccctagatcccctcgctctccccccaccaagcgcccccgcaggtccagccggagctccaagacccgacccgaccgcgaacccgaaccagacctccatccggacccgaatcctgaagaggataagcatcaactgctctcgaagcttcagattctcgcctttatagcgcaactatgcgctgggcatccggcgaaggcgttcccgccgttggatttgttgccgggagttcaagcgcttcacgacagtctgataattctggagtcggactcggcgctggtatcggcgattgcgagcttgtgcgagcagtggtggaaggaggagttgccgggccgagaatcgctgatctctcagtcgctccctttcttgctctcgagatctctcactctgaacaagaaggcagacgtccacagagtctacgccctccgcgaggctttcacctgcttcgatttcgaggacgagagcattgaggacttgaagctgttgctaatccggtgcgtgatttcgccgctgtttctgaaaacagaggaggggaggaagtttctggcgtttctgtttgggttgagttcgcaactgttgaaggaggttttggctgtaatcaagtctcagattccgtttggaaggaagtcgatgctggaggcctacggtgacgttttgttccgggcttggaaagtggcagagggggagctgaggagtgagattgagaacgggttcttgcaggttttgattgagggtgctatacacgccagctctggaggatttgctgcttctattagaagggttttgggagggtttataaaccagaggaccactgctggtgtcgagaagcttcttttccagctctcggagcctgtcatatttcgctctttgcaggtagcttttttgttaccaagtttaatttgtgatcctgattcgactaaagaggttaaagattcattgcttgataagcagttctttttattggggaaattacttgtagatgattgtccagaggtcagagtggttgcagtggaaggttcttgtcgtattcttcatctgttttgggaagtaatcccttcgcctaccatcacaaagttagttactagaatttttgatgatatgtcacatgatactagtcatgaggttaggctttccacactgaatggcactatgtatttgtttggcaatcctctctgtcatcaatttctcaatgtgcttctacccagattggggcatttgatgatggacaatgtcctatcaataagagttgccatggtagaactcctccttctcataagggatattcaaaacttccatttccataaggtagtgaagttagatgtactattatctacgcttgaaaatgatcaatctcaagttgctcagaaaattacaaggttgcttatgccatcatactttccctcaaaagaaactgttgaaacagcatgcaatcgttgtactacacttgtaaaaaggtctccgatggctggagcaaggttttgtgaatttgctgcgtcccaaggggcatctcttaagtccctgatggaacttgttagggtaatgattactttggtccttccacctaataatctggatgaacaacaagttgagggtttacttacttcttcttccaacctttgcaataccctagctggtgatccagttttcaagaaggagcttaaagaattctttgatggtgaaaagttgaagtacttgattgctgccgcacctaccgggcctgctcagtcttgtgtattcaacattgtttcaactgtctctcctgatgatgtggctggacttcttgatgaatgtatgcatctggtgactaattgtagtggtttatccaaaaatgtggagaagcaatctgaagtgaggtctgctcacaatttgttgctgtcttgtgatgcgattgatggtatgctggaagctctaacagcacttctgcagaaatcagcctatcgttgccatattaaatatggcagtgaaattaagaacttaagtgttttctctgcgaaaagaaagaaatcaaagtcctctggcaaaatttcagctcgacagaaacatgttagtggaaaaaaagtcaccagttttgaggacgattattcagtcgcggcaggaatagcctggcaaatcagggacttgcttgtatctgtcaatactcggaaggctatattgggatctcaaattctagaatctttactaatatgtctaaaggtcatttctgaggtcagcattgtgcagtgcatggattatgaatatgtggacacatttcctgtttcagcatatacagctcttgcgctgcatttgtcgcttcaaaatgtctcctccaataagaatgacaggacggattcatcagggtctactttggaggtaagtgccttatctctcagcagtcttgtcttccatcttgttgtaatttctaggcacagagaacctcaaacacatgcctccattgcaagtgatagtggaaatgtatatactgaaccaaagaagttggcgaacaaggtgaagatgcttactgcagtccaaaggttcatggttgatgctgctacaataggttttgctcctcaaactctggaacggtgcttaagatccacatcaggttatatacgatttgtcatatctactttggagcaacaacctcgtgagcaaattgattttgaggaggaagatttgaaggatgtagttctctgcttgaaaagctcctccacctatgcagcaaagttacttaatctagctcttaaagatgctactgaagcttcaccacctccagcagaagcttctgatcttgccaacgatatgcttgatttaattatctcgattgaattatacttgggctcaacctatgctggacatgtggtggcagcagtgaagccttgggttcctgacttgattttggcattaggatctgggcacattatgaaacagattataggagaagagtgtcaaacgagtccagctgatcgcatcagagtccactttccatcatggctcttaattttagccaagactgagctctctgaagctagtgaagtccggccagaagatgatggagactctgaacctgaggagtttcctgctttcaaaaaacttcttacaatgattgtcaaattgttaaaagaaaatctcagcatgcagggtgtgttaggggcaatcttcatgatcggtgctacagtagggctggaaaagaaaaattttgggctggtttttggacttctgcggtttgtatgcctgaagatattcaagcatgatgatagagaatggggtgatttgatgttggcatttctacaagatatctaccctcagatagagggagaaattgaggaagagtttgatgaagatggaagggaaacactggaaaaagccaaggacttgctggaacctatttggttgtatcatctgcatgaaactgggagggtctctatgatggaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1208

Amino Acids

134.31

Weight (kDa)

5.97

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 235 - 364 6.8e-45 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1007
AarI CACCTGC 1 cut(s) 659
AatII GACGTC 1 cut(s) 618
Acc36I ACCTGC 4 cut(s) 246, 659, 919, 1072
AccBSI CCGCTC 2 cut(s) 18, 186
AccI GTMKAC 2 cut(s) 627, 2549
AccII CGCG 3 cut(s) 291, 639, 2300
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 6 cut(s) 216, 1109, 1841, 2374, 2775, 3103
AcoI YGGCCR 1 cut(s) 3227
AcsI RAATTY 6 cut(s) 1296, 1694, 1874, 2232, 2373, 3382
AcuI CTGAAG 6 cut(s) 344, 348, 2076, 2964, 3231, 3443
AcyI GRCGYC 2 cut(s) 177, 615
AfaI GTAC 3 cut(s) 1533, 1648, 1901
AfeI AGCGCT 1 cut(s) 447
AfiI CCNNNNNNNGG 7 cut(s) 313, 421, 640, 1054, 1418, 1419, 1676
AflII CTTAAG 3 cut(s) 1721, 2185, 2776
AflIII ACRYGT 2 cut(s) 2251, 3043
AhlI ACTAGT 1 cut(s) 1322
AjnI CCWGG 1 cut(s) 2312
AjuI GAANNNNNNNTTGG 4 cut(s) 782, 814, 2345, 2377
AloI GAACNNNNNNTCC 2 cut(s) 291, 323
Alw21I GWGCWC 2 cut(s) 272, 3207
Alw26I GTCTC 6 cut(s) 819, 1671, 1969, 2515, 3237, 3613
AlwI GGATC 6 cut(s) 216, 1109, 1841, 2374, 2775, 3103
Ama87I CYCGRG 1 cut(s) 583
Aor13HI TCCGGA 1 cut(s) 313
Aor51HI AGCGCT 1 cut(s) 447
AoxI GGCC 4 cut(s) 541, 849, 1925, 3227
ApeKI GCWGC 7 cut(s) 974, 1700, 1910, 2488, 2735, 2906, 3053
ApoI RAATTY 6 cut(s) 1296, 1694, 1874, 2232, 2373, 3382
Asp700I GAANNNNTTC 4 cut(s) 45, 410, 920, 3428
AspLEI GCGC 6 cut(s) 249, 382, 392, 448, 487, 2488
AspS9I GGNCC 6 cut(s) 258, 316, 541, 1017, 1762, 1925
AsuC2I CCSGG 4 cut(s) 435, 540, 872, 1924
AsuHPI GGTGA 9 cut(s) 640, 869, 1856, 1898, 2023, 2263, 2707, 2943, 3467
AvaI CYCGRG 1 cut(s) 583
AvaII GGWCC 4 cut(s) 258, 316, 1017, 1762
AxyI CCTNAGG 1 cut(s) 3255
BaeGI GKGCMC 1 cut(s) 3105
BanII GRGCYC 3 cut(s) 272, 3029, 3207
BauI CACGAG 1 cut(s) 2832
BbsI GAAGAC 1 cut(s) 2581
Bbv12I GWGCWC 2 cut(s) 272, 3207
BbvCI CCTCAGC 1 cut(s) 899
BbvI GCAGC 7 cut(s) 961, 1687, 1897, 2475, 2722, 2918, 3065
BceAI ACGGC 1 cut(s) 403
BcgI CGANNNNNNTGC 2 cut(s) 2813, 2847
BciT130I CCWGG 1 cut(s) 2314
BclI TGATCA 1 cut(s) 1555
BcnI CCSGG 4 cut(s) 435, 540, 872, 1924
BcoDI GTCTC 6 cut(s) 819, 1671, 1969, 2515, 3237, 3613
BcuI ACTAGT 1 cut(s) 1322
BfaI CTAG 8 cut(s) 219, 1293, 1323, 1838, 2378, 2610, 2924, 3216
BfmI CTRYAG 3 cut(s) 2132, 2709, 3360
BfoI RGCGCY 3 cut(s) 250, 449, 488
BfrI CTTAAG 3 cut(s) 1721, 2185, 2776
BfuAI ACCTGC 4 cut(s) 246, 659, 919, 1072
BglII AGATCT 1 cut(s) 587
BlpI GCTNAGC 1 cut(s) 68
BmcAI AGTACT 1 cut(s) 1901
Bme1390I CCNGG 5 cut(s) 435, 540, 872, 1924, 2314
Bme18I GGWCC 4 cut(s) 258, 316, 1017, 1762
BmeT110I CYCGRG 1 cut(s) 583
BmgT120I GGNCC 6 cut(s) 258, 316, 541, 1017, 1762, 1925
BmiI GGNNCC 5 cut(s) 14, 318, 1059, 3072, 3570
BmrFI CCNGG 5 cut(s) 435, 540, 872, 1924, 2314
BmrI ACTGGG 1 cut(s) 3609
BmuI ACTGGG 1 cut(s) 3609
BpiI GAAGAC 1 cut(s) 2581
BplI GAGNNNNNCTC 4 cut(s) 464, 496, 2053, 2085
BpmI CTGGAG 5 cut(s) 491, 866, 984, 1698, 2943
Bpu10I CCTNAGC 1 cut(s) 899
Bpu1102I GCTNAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 1548
BpuMI CCSGG 4 cut(s) 435, 540, 872, 1924
BsaBI GATNNNNATC 2 cut(s) 339, 2785
BsaHI GRCGYC 2 cut(s) 177, 615
BsaI GGTCTC 2 cut(s) 1671, 3613
BsaJI CCNNGG 4 cut(s) 1461, 1708, 3065, 3555
BsaWI WCCGGW 2 cut(s) 313, 702
BsaXI ACNNNNNCTCC 6 cut(s) 122, 152, 291, 321, 1951, 1981
Bsc4I CCNNNNNNNGG 7 cut(s) 313, 421, 640, 1054, 1418, 1419, 1676
Bse1I ACTGG 4 cut(s) 1850, 2274, 3549, 3604
Bse21I CCTNAGG 1 cut(s) 3255
Bse3DI GCAATG 2 cut(s) 1145, 2640
Bse8I GATNNNNATC 2 cut(s) 339, 2785
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 1 cut(s) 2314
BseDI CCNNGG 4 cut(s) 1461, 1708, 3065, 3555
BseGI GGATG 5 cut(s) 180, 310, 397, 1789, 2875
BseJI GATNNNNATC 2 cut(s) 339, 2785
BseLI CCNNNNNNNGG 7 cut(s) 313, 421, 640, 1054, 1418, 1419, 1676
BseMI GCAATG 2 cut(s) 1145, 2640
BseNI ACTGG 4 cut(s) 1850, 2274, 3549, 3604
BseSI GKGCMC 1 cut(s) 3105
BseXI GCAGC 7 cut(s) 961, 1687, 1897, 2475, 2722, 2918, 3065
BseYI CCCAGC 1 cut(s) 392
BsgI GTGCAG 1 cut(s) 2447
Bsh1236I CGCG 3 cut(s) 291, 639, 2300
Bsh1285I CGRYCG 1 cut(s) 289
BshFI GGCC 4 cut(s) 543, 851, 1927, 3229
BsiEI CGRYCG 1 cut(s) 289
BsiHKAI GWGCWC 2 cut(s) 272, 3207
BsiHKCI CYCGRG 1 cut(s) 583
BsiSI CCGG 9 cut(s) 265, 314, 401, 434, 539, 703, 871, 1923, 3226
BslFI GGGAC 3 cut(s) 1690, 1711, 2339
BslI CCNNNNNNNGG 7 cut(s) 313, 421, 640, 1054, 1418, 1419, 1676
BsmAI GTCTC 6 cut(s) 819, 1671, 1969, 2515, 3237, 3613
BsmFI GGGAC 3 cut(s) 1690, 1711, 2339
BsnI GGCC 4 cut(s) 543, 851, 1927, 3229
Bso31I GGTCTC 2 cut(s) 1671, 3613
BsoBI CYCGRG 1 cut(s) 583
Bsp1286I GDGCHC 4 cut(s) 272, 3029, 3105, 3207
Bsp13I TCCGGA 1 cut(s) 313
Bsp1720I GCTNAGC 1 cut(s) 68
Bsp19I CCATGG 1 cut(s) 1461
BspANI GGCC 4 cut(s) 543, 851, 1927, 3229
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 3 cut(s) 291, 639, 2300
BspHI TCATGA 2 cut(s) 1327, 3348
BspLI GGNNCC 5 cut(s) 14, 318, 1059, 3072, 3570
BspMAI CTGCAG 2 cut(s) 2136, 2713
BspMI ACCTGC 4 cut(s) 246, 659, 919, 1072
BspPI GGATC 6 cut(s) 216, 1109, 1841, 2374, 2775, 3103
BspTI CTTAAG 3 cut(s) 1721, 2185, 2776
BspTNI GGTCTC 2 cut(s) 1671, 3613
BsrBI CCGCTC 2 cut(s) 18, 186
BsrDI GCAATG 2 cut(s) 1145, 2640
BsrI ACTGG 4 cut(s) 1850, 2274, 3549, 3604
BssECI CCNNGG 4 cut(s) 1461, 1708, 3065, 3555
BssNI GRCGYC 2 cut(s) 177, 615
BssSI CACGAG 1 cut(s) 2832
BssT1I CCWWGG 4 cut(s) 1461, 1708, 3065, 3555
Bst2BI CACGAG 1 cut(s) 2832
Bst2UI CCWGG 1 cut(s) 2314
Bst4CI ACNGT 7 cut(s) 458, 786, 857, 1624, 1963, 2772, 3364
Bst6I CTCTTC 4 cut(s) 36, 324, 3123, 3510
BstACI GRCGYC 2 cut(s) 177, 615
BstAFI CTTAAG 3 cut(s) 1721, 2185, 2776
BstAPI GCANNNNNTGC 1 cut(s) 346
BstC8I GCNNGC 6 cut(s) 505, 515, 958, 1636, 1929, 3323
BstDSI CCRYGG 1 cut(s) 1461
BstENI CCTNNNNNAGG 1 cut(s) 638
BstF5I GGATG 5 cut(s) 180, 310, 397, 1789, 2875
BstFNI CGCG 3 cut(s) 291, 639, 2300
BstH2I RGCGCY 3 cut(s) 250, 449, 488
BstHHI GCGC 6 cut(s) 249, 382, 392, 448, 487, 2488
BstMAI GTCTC 6 cut(s) 819, 1671, 1969, 2515, 3237, 3613
BstMCI CGRYCG 1 cut(s) 289
BstNI CCWGG 1 cut(s) 2314
BstNSI RCATGY 5 cut(s) 1638, 2255, 2636, 3047, 3325
BstSCI CCNGG 5 cut(s) 433, 538, 870, 1922, 2312
BstSFI CTRYAG 3 cut(s) 2132, 2709, 3360
BstSLI GKGCMC 1 cut(s) 3105
BstUI CGCG 3 cut(s) 291, 639, 2300
BstV1I GCAGC 7 cut(s) 961, 1687, 1897, 2475, 2722, 2918, 3065
BstV2I GAAGAC 1 cut(s) 2581
BstX2I RGATCY 5 cut(s) 221, 587, 2366, 2780, 3095
BstXI CCANNNNNNTGG 1 cut(s) 2041
BstYI RGATCY 5 cut(s) 221, 587, 2366, 2780, 3095
Bsu36I CCTNAGG 1 cut(s) 3255
BsuRI GGCC 4 cut(s) 543, 851, 1927, 3229
BtgI CCRYGG 1 cut(s) 1461
BtsCI GGATG 5 cut(s) 180, 310, 397, 1789, 2875
BtsI GCAGTG 6 cut(s) 524, 1020, 1224, 2176, 2435, 3063
BtsIMutI CAGTG 8 cut(s) 524, 1020, 1224, 1346, 2176, 2435, 3063, 3542
BveI ACCTGC 4 cut(s) 246, 659, 919, 1072
Cac8I GCNNGC 6 cut(s) 505, 515, 958, 1636, 1929, 3323
CciI TCATGA 2 cut(s) 1327, 3348
CfoI GCGC 6 cut(s) 249, 382, 392, 448, 487, 2488
Cfr13I GGNCC 6 cut(s) 258, 316, 541, 1017, 1762, 1925
CseI GACGC 2 cut(s) 185, 1692
Csp6I GTAC 3 cut(s) 1532, 1647, 1900
CviQI GTAC 3 cut(s) 1532, 1647, 1900
EaeI YGGCCR 1 cut(s) 3227
Eam1104I CTCTTC 4 cut(s) 36, 324, 3123, 3510
EarI CTCTTC 4 cut(s) 36, 324, 3123, 3510
EciI GGCGGA 2 cut(s) 25, 46
Ecl136II GAGCTC 2 cut(s) 270, 3205
Eco130I CCWWGG 4 cut(s) 1461, 1708, 3065, 3555
Eco147I AGGCCT 1 cut(s) 851
Eco24I GRGCYC 3 cut(s) 272, 3029, 3207
Eco31I GGTCTC 2 cut(s) 1671, 3613
Eco32I GATATC 1 cut(s) 3484
Eco47I GGWCC 4 cut(s) 258, 316, 1017, 1762
Eco47III AGCGCT 1 cut(s) 447
Eco53kI GAGCTC 2 cut(s) 270, 3205
Eco57I CTGAAG 6 cut(s) 344, 348, 2076, 2964, 3231, 3443
Eco81I CCTNAGG 1 cut(s) 3255
Eco88I CYCGRG 1 cut(s) 583
EcoICRI GAGCTC 2 cut(s) 270, 3205
EcoNI CCTNNNNNAGG 1 cut(s) 638
EcoRI GAATTC 1 cut(s) 1874
EcoRII CCWGG 1 cut(s) 2312
EcoRV GATATC 1 cut(s) 3484
EcoT14I CCWWGG 4 cut(s) 1461, 1708, 3065, 3555
EcoT22I ATGCAT 1 cut(s) 2007
EcoT38I GRGCYC 3 cut(s) 272, 3029, 3207
ErhI CCWWGG 4 cut(s) 1461, 1708, 3065, 3555
FalI AAGNNNNNCTT 2 cut(s) 1148, 1180
FaqI GGGAC 3 cut(s) 1690, 1711, 2339
FauI CCCGC 2 cut(s) 260, 423
FbaI TGATCA 1 cut(s) 1555
FblI GTMKAC 2 cut(s) 627, 2549
FokI GGATG 5 cut(s) 167, 297, 384, 1796, 2882
FriOI GRGCYC 3 cut(s) 272, 3029, 3207
FspBI CTAG 8 cut(s) 219, 1293, 1323, 1838, 2378, 2610, 2924, 3216
GlaI GCGC 6 cut(s) 248, 381, 391, 447, 486, 2487
GsaI CCCAGC 1 cut(s) 396
GsuI CTGGAG 5 cut(s) 491, 866, 984, 1698, 2943
HaeII RGCGCY 3 cut(s) 250, 449, 488
HaeIII GGCC 4 cut(s) 543, 851, 1927, 3229
HapII CCGG 9 cut(s) 265, 314, 401, 434, 539, 703, 871, 1923, 3226
HgaI GACGC 2 cut(s) 185, 1692
HhaI GCGC 6 cut(s) 249, 382, 392, 448, 487, 2488
Hin1I GRCGYC 2 cut(s) 177, 615
Hin6I GCGC 6 cut(s) 247, 380, 390, 446, 485, 2486
HinP1I GCGC 6 cut(s) 247, 380, 390, 446, 485, 2486
HindIII AAGCTT 4 cut(s) 356, 1037, 2946, 2967
HpaII CCGG 9 cut(s) 265, 314, 401, 434, 539, 703, 871, 1923, 3226
HphI GGTGA 9 cut(s) 640, 869, 1856, 1898, 2023, 2263, 2707, 2943, 3467
Hpy166II GTNNAC 6 cut(s) 619, 628, 1805, 2452, 2550, 3166
Hpy8I GTNNAC 6 cut(s) 619, 628, 1805, 2452, 2550, 3166
Hpy99I CGWCG 1 cut(s) 179
HpyCH4III ACNGT 7 cut(s) 458, 786, 857, 1624, 1963, 2772, 3364
HpyCH4IV ACGT 2 cut(s) 615, 861
HpySE526I ACGT 2 cut(s) 615, 861
Hsp92I GRCGYC 2 cut(s) 177, 615
HspAI GCGC 6 cut(s) 247, 380, 390, 446, 485, 2486
Kpn2I TCCGGA 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 1555
Lsp1109I GCAGC 7 cut(s) 961, 1687, 1897, 2475, 2722, 2918, 3065
MaeI CTAG 8 cut(s) 219, 1293, 1323, 1838, 2378, 2610, 2924, 3216
MaeII ACGT 2 cut(s) 615, 861
MaeIII GTNAC 7 cut(s) 857, 1095, 1288, 1311, 2011, 2269, 2913
MbiI CCGCTC 2 cut(s) 18, 186
MflI RGATCY 5 cut(s) 221, 587, 2366, 2780, 3095
MhlI GDGCHC 4 cut(s) 272, 3029, 3105, 3207
MlyI GAGTC 6 cut(s) 473, 482, 633, 3151, 3171, 3239
MmeI TCCRAC 5 cut(s) 153, 198, 402, 456, 1845
Mph1103I ATGCAT 1 cut(s) 2007
MroI TCCGGA 1 cut(s) 313
MroXI GAANNNNTTC 4 cut(s) 45, 410, 920, 3428
MslI CAYNNNNRTG 2 cut(s) 2256, 3591
MspA1I CMGCKG 2 cut(s) 721, 3149
MspCI CTTAAG 3 cut(s) 1721, 2185, 2776
MspI CCGG 9 cut(s) 265, 314, 401, 434, 539, 703, 871, 1923, 3226
MspR9I CCNGG 5 cut(s) 435, 540, 872, 1924, 2314
MvaI CCWGG 1 cut(s) 2314
MvnI CGCG 3 cut(s) 291, 639, 2300
NciI CCSGG 4 cut(s) 435, 540, 872, 1924
NcoI CCATGG 1 cut(s) 1461
NlaIV GGNNCC 5 cut(s) 14, 318, 1059, 3072, 3570
NmeAIII GCCGAG 2 cut(s) 461, 569
NmuCI GTSAC 4 cut(s) 857, 1311, 2011, 2269
NsiI ATGCAT 1 cut(s) 2007
NspI RCATGY 5 cut(s) 1638, 2255, 2636, 3047, 3325
PaeI GCATGC 2 cut(s) 1638, 3325
PaeR7I CTCGAG 1 cut(s) 583
PagI TCATGA 2 cut(s) 1327, 3348
PaqCI CACCTGC 1 cut(s) 659
PceI AGGCCT 1 cut(s) 851
PciI ACATGT 2 cut(s) 2251, 3043
PcsI WCGNNNNNNNCGW 2 cut(s) 500, 636
PdmI GAANNNNTTC 4 cut(s) 45, 410, 920, 3428
PfeI GAWTC 8 cut(s) 322, 364, 548, 820, 1121, 1142, 2381, 2537
PflFI GACNNNGTC 1 cut(s) 1439
PleI GAGTC 6 cut(s) 473, 481, 632, 3150, 3170, 3239
PpsI GAGTC 6 cut(s) 473, 481, 632, 3150, 3170, 3239
PscI ACATGT 2 cut(s) 2251, 3043
PsiI TTATAA 1 cut(s) 1007
Psp124BI GAGCTC 2 cut(s) 272, 3207
Psp6I CCWGG 1 cut(s) 2312
PspFI CCCAGC 1 cut(s) 392
PspGI CCWGG 1 cut(s) 2312
PspN4I GGNNCC 5 cut(s) 14, 318, 1059, 3072, 3570
PspPI GGNCC 6 cut(s) 258, 316, 541, 1017, 1762, 1925
PstI CTGCAG 2 cut(s) 2136, 2713
PsuI RGATCY 5 cut(s) 221, 587, 2366, 2780, 3095
PsyI GACNNNGTC 1 cut(s) 1439
PvuII CAGCTG 1 cut(s) 3149
RsaI GTAC 3 cut(s) 1533, 1648, 1901
RsaNI GTAC 3 cut(s) 1532, 1647, 1900
RseI CAYNNNNRTG 2 cut(s) 2256, 3591
SacI GAGCTC 2 cut(s) 272, 3207
Sau96I GGNCC 6 cut(s) 258, 316, 541, 1017, 1762, 1925
ScaI AGTACT 1 cut(s) 1901
SchI GAGTC 6 cut(s) 473, 482, 633, 3151, 3171, 3239
ScrFI CCNGG 5 cut(s) 435, 540, 872, 1924, 2314
SduI GDGCHC 4 cut(s) 272, 3029, 3105, 3207
SfcI CTRYAG 3 cut(s) 2132, 2709, 3360
Sfr274I CTCGAG 1 cut(s) 583
SinI GGWCC 4 cut(s) 258, 316, 1017, 1762
SlaI CTCGAG 1 cut(s) 583
SmiMI CAYNNNNRTG 2 cut(s) 2256, 3591
SmlI CTYRAG 5 cut(s) 583, 1563, 1721, 2185, 2776
SmoI CTYRAG 5 cut(s) 583, 1563, 1721, 2185, 2776
SpeI ACTAGT 1 cut(s) 1322
SphI GCATGC 2 cut(s) 1638, 3325
SseBI AGGCCT 1 cut(s) 851
SspMI CTAG 8 cut(s) 219, 1293, 1323, 1838, 2378, 2610, 2924, 3216
SstI GAGCTC 2 cut(s) 272, 3207
StuI AGGCCT 1 cut(s) 851
StyD4I CCNGG 5 cut(s) 433, 538, 870, 1922, 2312
StyI CCWWGG 4 cut(s) 1461, 1708, 3065, 3555
TaaI ACNGT 7 cut(s) 458, 786, 857, 1624, 1963, 2772, 3364
TaiI ACGT 2 cut(s) 618, 864
TaqI TCGA 9 cut(s) 353, 584, 657, 663, 839, 1032, 1124, 2242, 3008
TatI WGTACW 3 cut(s) 1531, 1646, 1899
TauI GCSGC 4 cut(s) 13, 721, 1916, 2303
TfiI GAWTC 8 cut(s) 322, 364, 548, 820, 1121, 1142, 2381, 2537
TscAI CASTG 8 cut(s) 524, 1027, 1224, 1353, 2176, 2435, 3063, 3549
TseFI GTSAC 4 cut(s) 857, 1311, 2011, 2269
TseI GCWGC 7 cut(s) 974, 1700, 1910, 2488, 2735, 2906, 3053
Tsp45I GTSAC 4 cut(s) 857, 1311, 2011, 2269
TspGWI ACGGA 2 cut(s) 813, 2549
TspRI CASTG 8 cut(s) 524, 1027, 1224, 1353, 2176, 2435, 3063, 3549
Tth111I GACNNNGTC 1 cut(s) 1439
Vha464I CTTAAG 3 cut(s) 1721, 2185, 2776
VpaK11BI GGWCC 4 cut(s) 258, 316, 1017, 1762
XagI CCTNNNNNAGG 1 cut(s) 638
XapI RAATTY 6 cut(s) 1296, 1694, 1874, 2232, 2373, 3382
XbaI TCTAGA 1 cut(s) 2377
XceI RCATGY 5 cut(s) 1638, 2255, 2636, 3047, 3325
XcmI CCANNNNNNNNNTGG 2 cut(s) 2162, 3562
XhoI CTCGAG 1 cut(s) 583
XmiI GTMKAC 2 cut(s) 627, 2549
XmnI GAANNNNTTC 4 cut(s) 45, 410, 920, 3428
XspI CTAG 8 cut(s) 219, 1293, 1323, 1838, 2378, 2610, 2924, 3216
ZraI GACGTC 1 cut(s) 616
ZrmI AGTACT 1 cut(s) 1901
Zsp2I ATGCAT 1 cut(s) 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.