Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000217.1

Orthogroup ID

OG0001655

Physical Location & Seq

Genomic Coordinates Reverse (-)

15372 .. 18940

Gene Structure 3569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000217.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

atgtttcggagccgagttgtaccgttgtttgtgaagggcaataacaaggctctgtgcagtcttagaggaacaaccccgtctagggtgttgaaggaggagccctatagattattctctacggggatcacaaggaaatgcttggagaaattccgctttttgcctaagggtaactatgtaccatctataaggaatatgtctactgtggcttccgtaggcgtcgaaagtaaggagggactgaagcttcttgtaaatggaggaccacgtgctcagaaaatggttggcatttggcttttttgctctgcttcttgggtattcagtatggtgatacttgggggtattacacgattaacacgatcaggtctttcaatgactgattggaagtttactgggggcctccctcctctatcagatgaggactggttgcttgagttcgagaagtacaagcagtcccctgagtataaacgtgtaaacaaagggatgagtattgaaaatttcaaatttatatactggatggaatatgcacatcgtatgtggggaagggcactgggtatcatgtttgcattgccattctcatattttcttcataaagggtatatcaccttaccacttggattaagactctcagcactctttggccttggtgctgggcagggtctaattggctggtggatggttaaaagtggtttagaggaaccagcctctgagtatgctcagccaagagttagcccttaccgtcttgcagctcatcttacttcagcctttgctatatactgtggacttctgtggactggtctttctgttatgatgcctgaaccaccttctaaatctgtagcgtgggttcatggggcagcaaaagtaaagagactctctcttcctgtcagcttgcttgttggagttactgctgtctcgggagcatttgttgccgggaatgatgctgggcatgcttataacacatttccaaagatgggagacacatggatccctgaggatgtttttgacatgaaaccactaatccggaacttctttgagaatacgtctactgtgcagctcgaccaccgaatccttgcaaccgcaactttagtttcaattggcgccctgtggtggtcaacaaggaagtttgacacacacccagtagttcgatctttgatcagaactactcttagcatggctgcccttcaggtcacacttggggtatccacacttctgtcctatgtgcctgttgagcttgggaccgcacatcaagctggagctttgactcttttgaccttaatgatccttctgaatcacacgggtcttggtcaggctcggggtcagggtaggcatcaacagcaggcatctggcaccatggtgattgtggcatccgtcattggcttagccattggagggtctcttattggcttgatggggctcaccttcttggcatcattgacactactacttttcagcttgccgctcttgttgatcttcagtcctctcctgtttttcgccagtttggtgtttgtgggatcacttgtcgggtttgctgcggctgcaaccatggctctcaccggcgtgtcggctctcgggtggatttttcaggaggttggaggccaaaggcttctgggttttggcggtggcgatatggcgggtagggttaaggaacaaagcaaggattggggtagatatttgcagcagggcgggatggggatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0016020 GO:0019866 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00190 ko00860 ko01100 ko01110 ko02020 ko04714 map00190 map00860 map01100 map01110 map02020 map04714

Pfam Domains

Protein Families

COX15-CtaA

Protein Analysis

563

Amino Acids

61.44

Weight (kDa)

9.9

Isoelectric Point (pI)

36.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56090
fragaria_vesca	FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_2g10180 FvH4_3g41910
malus_domestica	MD02G1271400.v1.1 MD07G1040600.v1.1
prunus_persica	Prupe.4G230100_v2.0.a1 Prupe.8G086500_v2.0.a1 Prupe.8G086500_v2.0.a1 Prupe.8G086500_v2.0.a1
pyrus_communis	pycom02g23200
rosa_chinensis	RchiOBHm_Chr5g0075121 RchiOBHm_Chr6g0267391
rosa_laevigata	RLG00000014008 RLG00000014012 RLG00000036531
rosa_multiflora	Rmu_sc0000746.1_g000001 Rmu_ssc0000217.1_g000007
rosa_roxburghii	Rroxscaffold_1G00006500 Rroxscaffold_7G00200820
rosa_rugosa	Rorug05G0436400 Rorug05G0436500 Rorug06G0032200 Rorug06G0032300 Rorug06G0032300
rosa_samantha	Rh5AG493700 Rh5BG515200 Rh5CG539000 Rh5DG527700 Rh6AG153700 Rh6CG149400 Rh6DG137800
rosa_wichuraiana	Rw5G045800 Rw6G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	948
AccB1I	GGYRCC	2 cut(s)	1091, 1340
AccBSI	CCGCTC	1 cut(s)	1453
AccI	GTMKAC	2 cut(s)	197, 1037
AccIII	TCCGGA	1 cut(s)	1014
AciI	CCGC	8 cut(s)	151, 1071, 1233, 1451, 1526, 1611, 1625, 1677
AclWI	GGATC	5 cut(s)	131, 973, 986, 1267, 1513
AcsI	RAATTY	3 cut(s)	146, 490, 497
AcuI	CTGAAG	4 cut(s)	257, 738, 1160, 1450
AcvI	CACGTG	1 cut(s)	263
AcyI	GRCGYC	2 cut(s)	216, 1092
AfaI	GTAC	3 cut(s)	21, 177, 440
AfiI	CCNNNNNNNGG	5 cut(s)	81, 82, 965, 1101, 1383
AflIII	ACRYGT	1 cut(s)	463
AgsI	TTSAA	5 cut(s)	91, 366, 488, 496, 1086
AleI	CACNNNNGTG	2 cut(s)	1346, 1550
AluBI	AGCT	8 cut(s)	241, 743, 882, 1048, 1225, 1244, 1250, 1446
AluI	AGCT	8 cut(s)	241, 743, 882, 1048, 1225, 1244, 1250, 1446
Alw21I	GWGCWC	1 cut(s)	268
Alw26I	GTCTC	4 cut(s)	856, 910, 963, 1392
AlwI	GGATC	5 cut(s)	131, 973, 986, 1267, 1513
AlwNI	CAGNNNCTG	1 cut(s)	701
Ama87I	CYCGRG	3 cut(s)	907, 1305, 1562
Aor13HI	TCCGGA	1 cut(s)	1014
AoxI	GGCC	3 cut(s)	391, 634, 1588
ApeKI	GCWGC	7 cut(s)	740, 848, 1045, 1169, 1523, 1529, 1669
ApoI	RAATTY	3 cut(s)	146, 490, 497
AspLEI	GCGC	1 cut(s)	1094
AspS9I	GGNCC	3 cut(s)	257, 391, 1230
AsuC2I	CCSGG	1 cut(s)	925
AsuHPI	GGTGA	5 cut(s)	334, 589, 1360, 1402, 1537
AvaI	CYCGRG	3 cut(s)	907, 1305, 1562
AvaII	GGWCC	2 cut(s)	257, 1230
AxyI	CCTNAGG	2 cut(s)	162, 984
BaeGI	GKGCMC	1 cut(s)	544
BamHI	GGATCC	1 cut(s)	978
BanI	GGYRCC	2 cut(s)	1091, 1340
BanII	GRGCYC	2 cut(s)	102, 1410
BarI	GAAGNNNNNNTAC	2 cut(s)	1185, 1217
BbrPI	CACGTG	1 cut(s)	263
Bbv12I	GWGCWC	1 cut(s)	268
BbvI	GCAGC	7 cut(s)	752, 860, 1057, 1156, 1510, 1516, 1681
BccI	CCATC	6 cut(s)	187, 505, 664, 958, 1396, 1675
BciVI	GTATCC	1 cut(s)	1204
BclI	TGATCA	1 cut(s)	1146
BcnI	CCSGG	1 cut(s)	925
BcoDI	GTCTC	4 cut(s)	856, 910, 963, 1392
BfaI	CTAG	1 cut(s)	81
BfmI	CTRYAG	2 cut(s)	103, 828
BfoI	RGCGCY	1 cut(s)	1095
BfuI	GTATCC	1 cut(s)	1204
BisI	GCNGC	9 cut(s)	741, 849, 1046, 1170, 1451, 1524, 1527, 1530, 1670
BlpI	GCTNAGC	2 cut(s)	711, 1372
BlsI	GCNGC	9 cut(s)	742, 850, 1047, 1171, 1452, 1525, 1528, 1531, 1671
Bme1390I	CCNGG	1 cut(s)	925
Bme18I	GGWCC	2 cut(s)	257, 1230
BmeT110I	CYCGRG	3 cut(s)	907, 1305, 1562
BmgT120I	GGNCC	3 cut(s)	257, 391, 1230
BmiI	GGNNCC	8 cut(s)	11, 99, 392, 693, 980, 1093, 1231, 1342
BmrFI	CCNGG	1 cut(s)	925
BmrI	ACTGGG	3 cut(s)	396, 554, 1124
BmsI	GCATC	6 cut(s)	795, 922, 1330, 1343, 1367, 1430
BmuI	ACTGGG	3 cut(s)	396, 554, 1124
BplI	GAGNNNNNCTC	2 cut(s)	853, 885
BpmI	CTGGAG	1 cut(s)	1266
Bpu1102I	GCTNAGC	2 cut(s)	711, 1372
BpuEI	CTTGAG	1 cut(s)	446
BpuMI	CCSGG	1 cut(s)	925
BsaAI	YACGTR	1 cut(s)	263
BsaHI	GRCGYC	2 cut(s)	216, 1092
BsaI	GGTCTC	1 cut(s)	1392
BsaJI	CCNNGG	3 cut(s)	637, 1344, 1536
BsaWI	WCCGGW	1 cut(s)	1014
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	5 cut(s)	81, 82, 965, 1101, 1383
Bse118I	RCCGGY	1 cut(s)	1547
Bse1I	ACTGG	7 cut(s)	391, 422, 512, 549, 793, 1130, 1488
Bse21I	CCTNAGG	2 cut(s)	162, 984
Bse3DI	GCAATG	1 cut(s)	560
BseAI	TCCGGA	1 cut(s)	1014
BseDI	CCNNGG	3 cut(s)	637, 1344, 1536
BseGI	GGATG	6 cut(s)	483, 516, 675, 994, 1358, 1686
BseLI	CCNNNNNNNGG	5 cut(s)	81, 82, 965, 1101, 1383
BseMI	GCAATG	1 cut(s)	560
BseMII	CTCAG	6 cut(s)	281, 444, 636, 693, 725, 975
BseNI	ACTGG	7 cut(s)	391, 422, 512, 549, 793, 1130, 1488
BseRI	GAGGAG	2 cut(s)	110, 390
BseSI	GKGCMC	1 cut(s)	544
BseXI	GCAGC	7 cut(s)	752, 860, 1057, 1156, 1510, 1516, 1681
BseYI	CCCAGC	2 cut(s)	644, 935
BsgI	GTGCAG	2 cut(s)	76, 1064
BshFI	GGCC	3 cut(s)	393, 636, 1590
BshNI	GGYRCC	2 cut(s)	1091, 1340
BsiHKAI	GWGCWC	1 cut(s)	268
BsiHKCI	CYCGRG	3 cut(s)	907, 1305, 1562
BsiSI	CCGG	3 cut(s)	924, 1015, 1548
BslFI	GGGAC	3 cut(s)	246, 433, 1243
BslI	CCNNNNNNNGG	5 cut(s)	81, 82, 965, 1101, 1383
BsmAI	GTCTC	4 cut(s)	856, 910, 963, 1392
BsmFI	GGGAC	3 cut(s)	246, 433, 1243
BsnI	GGCC	3 cut(s)	393, 636, 1590
Bso31I	GGTCTC	1 cut(s)	1392
BsoBI	CYCGRG	3 cut(s)	907, 1305, 1562
Bsp1286I	GDGCHC	4 cut(s)	102, 268, 544, 1410
Bsp13I	TCCGGA	1 cut(s)	1014
Bsp143I	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
Bsp1720I	GCTNAGC	2 cut(s)	711, 1372
Bsp19I	CCATGG	2 cut(s)	1344, 1536
BspACI	CCGC	8 cut(s)	151, 1071, 1233, 1451, 1526, 1611, 1625, 1677
BspANI	GGCC	3 cut(s)	393, 636, 1590
BspCNI	CTCAG	6 cut(s)	280, 445, 635, 694, 724, 976
BspEI	TCCGGA	1 cut(s)	1014
BspLI	GGNNCC	8 cut(s)	11, 99, 392, 693, 980, 1093, 1231, 1342
BspPI	GGATC	5 cut(s)	131, 973, 986, 1267, 1513
BspT107I	GGYRCC	2 cut(s)	1091, 1340
BspTNI	GGTCTC	1 cut(s)	1392
BsrBI	CCGCTC	1 cut(s)	1453
BsrDI	GCAATG	1 cut(s)	560
BsrFI	RCCGGY	1 cut(s)	1547
BsrI	ACTGG	7 cut(s)	391, 422, 512, 549, 793, 1130, 1488
BssAI	RCCGGY	1 cut(s)	1547
BssECI	CCNNGG	3 cut(s)	637, 1344, 1536
BssMI	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
BssNI	GRCGYC	2 cut(s)	216, 1092
BssT1I	CCWWGG	3 cut(s)	637, 1344, 1536
Bst4CI	ACNGT	5 cut(s)	24, 202, 734, 773, 1042
Bst6I	CTCTTC	1 cut(s)	876
BstACI	GRCGYC	2 cut(s)	216, 1092
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstBAI	YACGTR	1 cut(s)	263
BstC8I	GCNNGC	4 cut(s)	884, 942, 1332, 1448
BstDSI	CCRYGG	2 cut(s)	1344, 1536
BstF5I	GGATG	6 cut(s)	483, 516, 675, 994, 1358, 1686
BstH2I	RGCGCY	1 cut(s)	1095
BstHHI	GCGC	1 cut(s)	1094
BstKTI	GATC	8 cut(s)	126, 356, 981, 1142, 1149, 1275, 1464, 1508
BstMAI	GTCTC	4 cut(s)	856, 910, 963, 1392
BstMBI	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
BstMWI	GCNNNNNNNGC	7 cut(s)	920, 941, 1222, 1241, 1327, 1529, 1538
BstNSI	RCATGY	1 cut(s)	944
BstSCI	CCNGG	1 cut(s)	923
BstSFI	CTRYAG	2 cut(s)	103, 828
BstSLI	GKGCMC	1 cut(s)	544
BstV1I	GCAGC	7 cut(s)	752, 860, 1057, 1156, 1510, 1516, 1681
BstX2I	RGATCY	1 cut(s)	978
BstYI	RGATCY	1 cut(s)	978
Bsu36I	CCTNAGG	2 cut(s)	162, 984
BsuI	GTATCC	1 cut(s)	1204
BsuRI	GGCC	3 cut(s)	393, 636, 1590
BtgI	CCRYGG	2 cut(s)	1344, 1536
BtsCI	GGATG	6 cut(s)	483, 516, 675, 994, 1358, 1686
BtsIMutI	CAGTG	1 cut(s)	542
Cac8I	GCNNGC	4 cut(s)	884, 942, 1332, 1448
CaiI	CAGNNNCTG	1 cut(s)	701
CfoI	GCGC	1 cut(s)	1094
Cfr10I	RCCGGY	1 cut(s)	1547
Cfr13I	GGNCC	3 cut(s)	257, 391, 1230
CseI	GACGC	1 cut(s)	205
Csp6I	GTAC	3 cut(s)	20, 176, 439
CviAII	CATG	8 cut(s)	553, 842, 941, 975, 1000, 1165, 1345, 1537
CviQI	GTAC	3 cut(s)	20, 176, 439
DinI	GGCGCC	1 cut(s)	1093
DpnI	GATC	8 cut(s)	125, 355, 980, 1141, 1148, 1274, 1463, 1507
DpnII	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
Eam1104I	CTCTTC	1 cut(s)	876
EarI	CTCTTC	1 cut(s)	876
Eco130I	CCWWGG	3 cut(s)	637, 1344, 1536
Eco24I	GRGCYC	2 cut(s)	102, 1410
Eco31I	GGTCTC	1 cut(s)	1392
Eco47I	GGWCC	2 cut(s)	257, 1230
Eco57I	CTGAAG	4 cut(s)	257, 738, 1160, 1450
Eco72I	CACGTG	1 cut(s)	263
Eco81I	CCTNAGG	2 cut(s)	162, 984
Eco88I	CYCGRG	3 cut(s)	907, 1305, 1562
EcoO109I	RGGNCCY	1 cut(s)	391
EcoT14I	CCWWGG	3 cut(s)	637, 1344, 1536
EcoT38I	GRGCYC	2 cut(s)	102, 1410
EgeI	GGCGCC	1 cut(s)	1093
EheI	GGCGCC	1 cut(s)	1093
ErhI	CCWWGG	3 cut(s)	637, 1344, 1536
FaeI	CATG	8 cut(s)	556, 845, 944, 978, 1003, 1168, 1348, 1540
FaqI	GGGAC	3 cut(s)	246, 433, 1243
FatI	CATG	8 cut(s)	552, 841, 940, 974, 999, 1164, 1344, 1536
FauI	CCCGC	2 cut(s)	1618, 1670
FbaI	TGATCA	1 cut(s)	1146
FblI	GTMKAC	2 cut(s)	197, 1037
Fnu4HI	GCNGC	9 cut(s)	741, 849, 1046, 1170, 1451, 1524, 1527, 1530, 1670
FokI	GGATG	5 cut(s)	490, 523, 682, 1001, 1345
FriOI	GRGCYC	2 cut(s)	102, 1410
Fsp4HI	GCNGC	9 cut(s)	741, 849, 1046, 1170, 1451, 1524, 1527, 1530, 1670
FspBI	CTAG	1 cut(s)	81
GlaI	GCGC	1 cut(s)	1093
GluI	GCNGC	9 cut(s)	741, 849, 1046, 1170, 1451, 1524, 1527, 1530, 1670
GsaI	CCCAGC	2 cut(s)	648, 939
GsuI	CTGGAG	1 cut(s)	1266
HaeII	RGCGCY	1 cut(s)	1095
HaeIII	GGCC	3 cut(s)	393, 636, 1590
HapII	CCGG	3 cut(s)	924, 1015, 1548
HgaI	GACGC	1 cut(s)	205
HhaI	GCGC	1 cut(s)	1094
Hin1I	GRCGYC	2 cut(s)	216, 1092
Hin1II	CATG	8 cut(s)	556, 845, 944, 978, 1003, 1168, 1348, 1540
Hin6I	GCGC	1 cut(s)	1092
HinP1I	GCGC	1 cut(s)	1092
HincII	GTYRAC	1 cut(s)	1107
HindII	GTYRAC	1 cut(s)	1107
HindIII	AAGCTT	1 cut(s)	239
HinfI	GANTC	5 cut(s)	618, 864, 1059, 1255, 1282
HpaII	CCGG	3 cut(s)	924, 1015, 1548
HphI	GGTGA	5 cut(s)	334, 589, 1360, 1402, 1537
Hpy166II	GTNNAC	7 cut(s)	198, 384, 469, 776, 786, 1038, 1107
Hpy188I	TCNGA	6 cut(s)	9, 270, 409, 703, 1151, 1281
Hpy188III	TCNNGA	4 cut(s)	433, 909, 1015, 1577
Hpy8I	GTNNAC	7 cut(s)	198, 384, 469, 776, 786, 1038, 1107
Hpy99I	CGWCG	1 cut(s)	221
HpyAV	CCTTC	7 cut(s)	28, 85, 531, 828, 1184, 1286, 1423
HpyCH4III	ACNGT	5 cut(s)	24, 202, 734, 773, 1042
HpyCH4IV	ACGT	3 cut(s)	262, 463, 1034
HpyCH4V	TGCA	8 cut(s)	57, 521, 560, 740, 1045, 1067, 1532, 1669
HpyF10VI	GCNNNNNNNGC	7 cut(s)	920, 941, 1222, 1241, 1327, 1529, 1538
HpySE526I	ACGT	3 cut(s)	262, 463, 1034
Hsp92I	GRCGYC	2 cut(s)	216, 1092
Hsp92II	CATG	8 cut(s)	556, 845, 944, 978, 1003, 1168, 1348, 1540
HspAI	GCGC	1 cut(s)	1092
KasI	GGCGCC	1 cut(s)	1091
Kpn2I	TCCGGA	1 cut(s)	1014
Ksp22I	TGATCA	1 cut(s)	1146
Kzo9I	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
LmnI	GCTCC	4 cut(s)	9, 97, 911, 1247
Lsp1109I	GCAGC	7 cut(s)	752, 860, 1057, 1156, 1510, 1516, 1681
LweI	GCATC	6 cut(s)	795, 922, 1330, 1343, 1367, 1430
MaeI	CTAG	1 cut(s)	81
MaeII	ACGT	3 cut(s)	262, 463, 1034
MaeIII	GTNAC	3 cut(s)	167, 895, 1180
MalI	GATC	8 cut(s)	125, 355, 980, 1141, 1148, 1274, 1463, 1507
MbiI	CCGCTC	1 cut(s)	1453
MboI	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
MboII	GAAGA	3 cut(s)	572, 863, 1456
MfeI	CAATTG	1 cut(s)	1086
MflI	RGATCY	1 cut(s)	978
MhlI	GDGCHC	4 cut(s)	102, 268, 544, 1410
MluCI	AATT	5 cut(s)	146, 490, 497, 657, 1086
Mly113I	GGCGCC	1 cut(s)	1092
MlyI	GAGTC	3 cut(s)	612, 858, 1249
MmeI	TCCRAC	2 cut(s)	871, 1564
MroI	TCCGGA	1 cut(s)	1014
MseI	TTAA	5 cut(s)	347, 614, 675, 1268, 1635
MslI	CAYNNNNRTG	2 cut(s)	1346, 1550
MspI	CCGG	3 cut(s)	924, 1015, 1548
MspR9I	CCNGG	1 cut(s)	925
MunI	CAATTG	1 cut(s)	1086
MwoI	GCNNNNNNNGC	7 cut(s)	920, 941, 1222, 1241, 1327, 1529, 1538
NarI	GGCGCC	1 cut(s)	1092
NciI	CCSGG	1 cut(s)	925
NcoI	CCATGG	2 cut(s)	1344, 1536
NdeII	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
NlaIII	CATG	8 cut(s)	556, 845, 944, 978, 1003, 1168, 1348, 1540
NlaIV	GGNNCC	8 cut(s)	11, 99, 392, 693, 980, 1093, 1231, 1342
NmeAIII	GCCGAG	1 cut(s)	38
NmuCI	GTSAC	1 cut(s)	1180
NspI	RCATGY	1 cut(s)	944
OliI	CACNNNNGTG	2 cut(s)	1346, 1550
PaeI	GCATGC	1 cut(s)	944
PcsI	WCGNNNNNNNCGW	1 cut(s)	349
PfeI	GAWTC	2 cut(s)	1059, 1282
PkrI	GCNGC	9 cut(s)	742, 850, 1047, 1171, 1452, 1525, 1528, 1531, 1671
PleI	GAGTC	3 cut(s)	612, 858, 1249
PluTI	GGCGCC	1 cut(s)	1095
PmaCI	CACGTG	1 cut(s)	263
PmlI	CACGTG	1 cut(s)	263
PpsI	GAGTC	3 cut(s)	612, 858, 1249
Ppu21I	YACGTR	1 cut(s)	263
PsiI	TTATAA	1 cut(s)	948
PspCI	CACGTG	1 cut(s)	263
PspFI	CCCAGC	2 cut(s)	644, 935
PspN4I	GGNNCC	8 cut(s)	11, 99, 392, 693, 980, 1093, 1231, 1342
PspPI	GGNCC	3 cut(s)	257, 391, 1230
PsrI	GAACNNNNNNTAC	2 cut(s)	822, 854
PstNI	CAGNNNCTG	1 cut(s)	701
PsuI	RGATCY	1 cut(s)	978
RsaI	GTAC	3 cut(s)	21, 177, 440
RsaNI	GTAC	3 cut(s)	20, 176, 439
RseI	CAYNNNNRTG	2 cut(s)	1346, 1550
SaqAI	TTAA	5 cut(s)	347, 614, 675, 1268, 1635
SatI	GCNGC	9 cut(s)	741, 849, 1046, 1170, 1451, 1524, 1527, 1530, 1670
Sau3AI	GATC	8 cut(s)	123, 353, 978, 1139, 1146, 1272, 1461, 1505
Sau96I	GGNCC	3 cut(s)	257, 391, 1230
SchI	GAGTC	3 cut(s)	612, 858, 1249
ScrFI	CCNGG	1 cut(s)	925
SduI	GDGCHC	4 cut(s)	102, 268, 544, 1410
SfaNI	GCATC	6 cut(s)	795, 922, 1330, 1343, 1367, 1430
SfcI	CTRYAG	2 cut(s)	103, 828
SfoI	GGCGCC	1 cut(s)	1093
SgrAI	CRCCGGYG	1 cut(s)	1547
SinI	GGWCC	2 cut(s)	257, 1230
SmiMI	CAYNNNNRTG	2 cut(s)	1346, 1550
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SphI	GCATGC	1 cut(s)	944
Sse9I	AATT	5 cut(s)	146, 490, 497, 657, 1086
SsiI	CCGC	8 cut(s)	151, 1071, 1233, 1451, 1526, 1611, 1625, 1677
SspDI	GGCGCC	1 cut(s)	1091
SspMI	CTAG	1 cut(s)	81
StyD4I	CCNGG	1 cut(s)	923
StyI	CCWWGG	3 cut(s)	637, 1344, 1536
TaaI	ACNGT	5 cut(s)	24, 202, 734, 773, 1042
TaiI	ACGT	3 cut(s)	265, 466, 1037
TaqI	TCGA	4 cut(s)	219, 432, 1050, 1138
TasI	AATT	5 cut(s)	146, 490, 497, 657, 1086
TatI	WGTACW	1 cut(s)	438
TauI	GCSGC	2 cut(s)	1453, 1529
TfiI	GAWTC	2 cut(s)	1059, 1282
Tru1I	TTAA	5 cut(s)	347, 614, 675, 1268, 1635
Tru9I	TTAA	5 cut(s)	347, 614, 675, 1268, 1635
TscAI	CASTG	1 cut(s)	549
TseFI	GTSAC	1 cut(s)	1180
TseI	GCWGC	7 cut(s)	740, 848, 1045, 1169, 1523, 1529, 1669
Tsp45I	GTSAC	1 cut(s)	1180
TspDTI	ATGAA	3 cut(s)	572, 830, 1016
TspGWI	ACGGA	2 cut(s)	199, 1351
TspRI	CASTG	1 cut(s)	549
VpaK11BI	GGWCC	2 cut(s)	257, 1230
XapI	RAATTY	3 cut(s)	146, 490, 497
XceI	RCATGY	1 cut(s)	944
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1351
XmiI	GTMKAC	2 cut(s)	197, 1037
XspI	CTAG	1 cut(s)	81

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.