MULE transposase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29511 FvH4_6g24082 FvH4_7g16801 FvH4_7g16802 |
| rosa_multiflora | Rmu_sc0003594.1_g000006 Rmu_sc0010463.1_g000007 Rmu_ssc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00316740 |
| rosa_rugosa | Rorug01G0114800 Rorug02G0237500 Rorug04G0022000 Rorug04G0234800 Rorug06G0053400 Rorug06G0059100 |
| rosa_wichuraiana | Rw0G017920 Rw0G022210 Rw1G011530 Rw5G031600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 254 |
| AgsI | TTSAA | 3 cut(s) | 65, 71, 230 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 113, 145 |
| AluBI | AGCT | 1 cut(s) | 350 |
| AluI | AGCT | 1 cut(s) | 350 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AlwI | GGATC | 1 cut(s) | 254 |
| BanII | GRGCYC | 1 cut(s) | 83 |
| BbsI | GAAGAC | 1 cut(s) | 306 |
| BccI | CCATC | 2 cut(s) | 28, 271 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BpiI | GAAGAC | 1 cut(s) | 306 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BsmI | GAATGC | 1 cut(s) | 253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 83 |
| Bsp143I | GATC | 2 cut(s) | 73, 259 |
| BspPI | GGATC | 1 cut(s) | 254 |
| BssMI | GATC | 2 cut(s) | 73, 259 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 351 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstKTI | GATC | 2 cut(s) | 76, 262 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMBI | GATC | 2 cut(s) | 73, 259 |
| BstV2I | GAAGAC | 1 cut(s) | 306 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| CviAII | CATG | 2 cut(s) | 32, 104 |
| CviJI | RGCY | 3 cut(s) | 81, 109, 350 |
| CviKI_1 | RGCY | 3 cut(s) | 81, 109, 350 |
| DdeI | CTNAG | 1 cut(s) | 351 |
| DpnI | GATC | 2 cut(s) | 75, 261 |
| DpnII | GATC | 2 cut(s) | 73, 259 |
| Eco24I | GRGCYC | 1 cut(s) | 83 |
| EcoT38I | GRGCYC | 1 cut(s) | 83 |
| FaeI | CATG | 2 cut(s) | 35, 107 |
| FaiI | YATR | 5 cut(s) | 33, 105, 154, 296, 306 |
| FatI | CATG | 2 cut(s) | 31, 103 |
| FokI | GGATG | 1 cut(s) | 227 |
| FriOI | GRGCYC | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 35, 107 |
| HinfI | GANTC | 1 cut(s) | 205 |
| Hpy166II | GTNNAC | 1 cut(s) | 325 |
| Hpy188I | TCNGA | 2 cut(s) | 78, 259 |
| Hpy8I | GTNNAC | 1 cut(s) | 325 |
| HpyAV | CCTTC | 1 cut(s) | 282 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 2 cut(s) | 89, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 351 |
| Hsp92II | CATG | 2 cut(s) | 35, 107 |
| Kzo9I | GATC | 2 cut(s) | 73, 259 |
| LmnI | GCTCC | 1 cut(s) | 235 |
| LpnPI | CCDG | 1 cut(s) | 342 |
| MalI | GATC | 2 cut(s) | 75, 261 |
| MboI | GATC | 2 cut(s) | 73, 259 |
| MboII | GAAGA | 3 cut(s) | 83, 182, 311 |
| MfeI | CAATTG | 2 cut(s) | 84, 190 |
| MhlI | GDGCHC | 1 cut(s) | 83 |
| MluCI | AATT | 4 cut(s) | 51, 84, 190, 225 |
| MlyI | GAGTC | 1 cut(s) | 214 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 1 cut(s) | 160 |
| MslI | CAYNNNNRTG | 1 cut(s) | 36 |
| MunI | CAATTG | 2 cut(s) | 84, 190 |
| Mva1269I | GAATGC | 1 cut(s) | 253 |
| NdeII | GATC | 2 cut(s) | 73, 259 |
| NlaIII | CATG | 2 cut(s) | 35, 107 |
| PctI | GAATGC | 1 cut(s) | 253 |
| PleI | GAGTC | 1 cut(s) | 213 |
| PpsI | GAGTC | 1 cut(s) | 213 |
| RseI | CAYNNNNRTG | 1 cut(s) | 36 |
| Sau3AI | GATC | 2 cut(s) | 73, 259 |
| SchI | GAGTC | 1 cut(s) | 214 |
| SduI | GDGCHC | 1 cut(s) | 83 |
| SetI | ASST | 2 cut(s) | 244, 352 |
| SgeI | CNNG | 4 cut(s) | 44, 80, 116, 295 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 36 |
| Sse9I | AATT | 4 cut(s) | 51, 84, 190, 225 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TaqI | TCGA | 1 cut(s) | 181 |
| TasI | AATT | 4 cut(s) | 51, 84, 190, 225 |
| TspDTI | ATGAA | 1 cut(s) | 17 |