Rmu_ssc0000420.1_g000026

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000420.1
OG0004701
Physical Location & Seq
Forward (+)
126605 .. 132695
6091 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3354 bp
atggcagatttggacgacgatttcggagacatctacactgatgtcgaagcgcaggccgcttcagccatcaacggcgtatcggacttcgctcagttctatacagaacccgaagaccagcaagatagaaatgatagtaacaacaatgcaaagaacggcaagggtttcgtctccgattctaagaaacccaaagaggaattgggtggtaaagtttcgggttcggagtcggatgaggattacagtgacagtgaggatgacctgaatatagttttgaacgaggggggttgtaaaggtattccctttccggtttcaggtggagggagcatgagggttgatgattatgaagatgaggatgatgatgctcttgtgcccatgaaagattgcaagtatgtatggactcaaggatctacttgtccaagcaatggaaaagccaatgagtctttggatttggtgtcgcctatgccgtttggaggagaccactcgcagattagtcatgttcgtgatacacctaatccagtggtgattcgaaatagatatggttttcgacttccttggaccatactggacgtggatattgaatcatttgaggagaagtcatggaggtatcctgaagttgatataacagattacttcaattttgatttgaacgaggacagctggaaagagtactgcaactccctgccaaaagggaaagcaattcagatagaagatagtgttgttgaacgccaaccatcttttgatagtaggcatccacgaagttggaattctgatgttgtgatacagatttctgtgcatgatcccacccaggaaacctcccattctggtgaggaacatgggcatacaaatagcagggcccatgagacatctgaaaatggggagcttgatgcaaatggaaaccaaaacaatatctcatataatactacgaccgatgatgattcatcattaggaagtccagaagcaaacccaagaaaattagacagatgttcccagaagatcagtgcatcccatccaatgacaatagactccgatgatcacagtaaccaggtcattggttttgatggggataaccataaggaggtgaatggtatctcattggaggccattgaaattgcaaataaagtgacagaaagtcttgacaggaatacttcctgtgctgatcaatgcatgatggagacactattattggtgagtgatggcgatgatcaacttagtctcatttcatcatgttttgcatctgattctgaagcttccaagaacagtgttcattttgatccagaagatattcatactcctgtaagccctgtggtgaattcacacactgaaccacgcaagcctgtcacatcatcttttaagaactcaaaaagcaattgcataaaaagaaaaagagttgatatccaagattattccatctgtagaagttcttctcaaaagaagcataatcatcaggccaggaggcttaatggtgttgatgaaccaagtaagcacagaaacgacaatgataggtcacccacctcagatacagaggacccatataacaggaattgctcagagaattttcgtggacagaaggacaggctgcgagattctggcggtagtaacagagaagatggtccagattataaagaaccaaagttttcctgccattatggtattagatatgatgataaccaacatcggaatcaaagagataagagaaatttttcaagtagaaaaggtagtcacctgttccaagagaaactagatccatatgcgaaaagaacttttaatgaaaggcagactttctgtgaagataaggatagagattggagtcactttggaagaatgcagttcactgaagagaggagtcctctccccagtagggagtccagggggttgcattctaggtgttcctccactgttgaggaaaggggtgctcaatggggaaggaatagcaacaaactgctatttaagaaaatatccaattataagtggcatgaagacgattttctgggagaaaaagctgggagatacgcatcattcactagtcgaaaaaggaataattttgatgactttgatgagaggcagttgccacccgtcaggagagaattaagtaactgggggcgaaggggtggatatgtggacagtcccatttatttggatgattcacactctgagcaatttgaagatgaatattgcaaacaccgagaaaatcgagactgctcccatcagtcttacagagacttatatacagctgatgaaggaagctggaatctctccatatcaccaagaaatgaagtttcttacccaagaacaagtgatgaaagatattggagacgtgtgagaaaaatagatgccgaagaagccaatcagattaattggtttgatgatcaccatgatgcttatgaaatcgaagataacatgtatcgtaatgatcatttaaggtggagaagatctaactggcaatctgaagttatgcactggacagaagaccagtttactttcagacatcacggtgttgaattgtattctgagaaagcatcacgttcttatcagaaatttgtacggcgtgaaaaatttcatgctaaatatggtcctctgcatgatggaatgcctattgatattatacagccagagcagcatggattgaaaatggccagaaaaggagtcggtgctaactttattaatagaagtgctaagatgcatagagttaagcatgagcagacgttgaggcgcagggattcgatggacttggctgttagggaacaaaagatctctgcaagatgctccaaagccagattttcgatatgcaatggtaggccagaaagtatgggtgcagagattagtggagaggggataacctcagggaaatcacagtcgtgtgaatctgagaaggcaagggcagtagaaaacacccaaaaatttgcatgggaccgaaacgagaaagggcatcatatgtttccagttacaaatcaaaatgctgatttggatatagaggagggccagattttaatacaagaacagaatacagcaaatcctttgcagagaaaacatgcttatgatcacacagcagtagcccacagcgtgaaaaagagaatgtttgattgtcataatacttccaatgggaatcaggttgtagaaggatatgacaaacaaaagattcttcagacaatggctaaaatggagcaacgtgaggagcgctttaaggagccgatcaccttaaaaaaggagccagacaagttgttcaagcctgaggttgatcccacagttcaagcagctgaagaaaagcaacataggccagcccgaaagaggcagtggggtggtaggttctcaaagaacgactctctaatgttgggaattccattgaaagcaaggttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1117

Amino Acids

128.65

Weight (kDa)

5.72

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 188 - 226 1.3e-16 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1617, 1962
AccB7I CCANNNNNTGG 1 cut(s) 419
AciI CCGC 2 cut(s) 57, 1587
AclWI GGATC 5 cut(s) 409, 788, 1262, 1733, 3227
AcoI YGGCCR 1 cut(s) 2628
AcsI RAATTY 8 cut(s) 760, 1306, 1549, 1693, 2531, 2549, 2894, 3330
AcuI CTGAAG 7 cut(s) 45, 627, 1260, 1851, 2463, 3122, 3273
AdeI CACNNNGTG 1 cut(s) 3058
AfaI GTAC 2 cut(s) 665, 2538
AfeI AGCGCT 1 cut(s) 3173
AfiI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1072, 1855, 3282
AflIII ACRYGT 2 cut(s) 2311, 2394
AhdI GACNNNNNGTC 1 cut(s) 1125
AhlI ACTAGT 1 cut(s) 2018
AjiI CACGTC 2 cut(s) 565, 2312
AjnI CCWGG 4 cut(s) 801, 1038, 1445, 1862
AleI CACNNNNGTG 1 cut(s) 2851
AluBI AGCT 7 cut(s) 654, 877, 1244, 1997, 2228, 2241, 3251
AluI AGCT 7 cut(s) 654, 877, 1244, 1997, 2228, 2241, 3251
Alw21I GWGCWC 1 cut(s) 1912
Alw26I GTCTC 9 cut(s) 21, 172, 465, 851, 1163, 1214, 2184, 2208, 2302
AlwI GGATC 5 cut(s) 409, 788, 1262, 1733, 3227
Aor51HI AGCGCT 1 cut(s) 3173
AoxI GGCC 8 cut(s) 54, 849, 1095, 1443, 2628, 2792, 2974, 3269
ApaI GGGCCC 1 cut(s) 853
ApeKI GCWGC 3 cut(s) 1573, 2611, 3248
ApoI RAATTY 8 cut(s) 760, 1306, 1549, 1693, 2531, 2549, 2894, 3330
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2349, 2658
Asp700I GAANNNNTTC 4 cut(s) 1278, 1417, 1696, 2550
AspLEI GCGC 3 cut(s) 52, 2709, 3174
AspS9I GGNCC 8 cut(s) 552, 849, 850, 1522, 1607, 2567, 2905, 2974
AsuII TTCGAA 1 cut(s) 523
AvaII GGWCC 5 cut(s) 552, 1522, 1607, 2567, 2905
AxyI CCTNAGG 2 cut(s) 2836, 3225
BaeGI GKGCMC 2 cut(s) 369, 853
BalI TGGCCA 1 cut(s) 2630
BanII GRGCYC 1 cut(s) 853
BarI GAAGNNNNNNTAC 2 cut(s) 1402, 1434
BbsI GAAGAC 3 cut(s) 117, 1980, 2469
Bbv12I GWGCWC 1 cut(s) 1912
BbvI GCAGC 3 cut(s) 1560, 2623, 3260
BceAI ACGGC 4 cut(s) 88, 169, 445, 2555
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 4 cut(s) 803, 1040, 1447, 1864
BciVI GTATCC 1 cut(s) 612
BclI TGATCA 6 cut(s) 1027, 1153, 1198, 2362, 2407, 3034
BcoDI GTCTC 9 cut(s) 21, 172, 465, 851, 1163, 1214, 2184, 2208, 2302
BcuI ACTAGT 1 cut(s) 2018
BfaI CTAG 3 cut(s) 1736, 1878, 2019
BfmI CTRYAG 1 cut(s) 1408
BfoI RGCGCY 1 cut(s) 3175
BfuI GTATCC 1 cut(s) 612
BglII AGATCT 2 cut(s) 2426, 2745
BisI GCNGC 4 cut(s) 57, 1574, 2612, 3249
BlsI GCNGC 4 cut(s) 58, 1575, 2613, 3250
BmcAI AGTACT 1 cut(s) 665
Bme1390I CCNGG 4 cut(s) 803, 1040, 1447, 1864
Bme18I GGWCC 5 cut(s) 552, 1522, 1607, 2567, 2905
BmeRI GACNNNNNGTC 1 cut(s) 1125
BmgBI CACGTC 2 cut(s) 565, 2312
BmgT120I GGNCC 8 cut(s) 552, 849, 850, 1522, 1607, 2567, 2905, 2974
BmiI GGNNCC 5 cut(s) 851, 1524, 2906, 3183, 3204
BmrFI CCNGG 4 cut(s) 803, 1040, 1447, 1864
BmrI ACTGGG 2 cut(s) 1845, 2101
BmuI ACTGGG 2 cut(s) 1845, 2101
BpiI GAAGAC 3 cut(s) 117, 1980, 2469
BplI GAGNNNNNCTC 2 cut(s) 1828, 1860
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 1 cut(s) 381
BsaBI GATNNNNATC 1 cut(s) 2008
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 3 cut(s) 548, 801, 1863
BsaWI WCCGGW 1 cut(s) 301
BsaXI ACNNNNNCTCC 2 cut(s) 656, 686
Bsc4I CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1072, 1855, 3282
Bse1I ACTGG 8 cut(s) 512, 564, 1851, 2096, 2438, 2459, 2467, 2936
Bse21I CCTNAGG 2 cut(s) 2836, 3225
Bse3DI GCAATG 2 cut(s) 424, 2791
Bse8I GATNNNNATC 1 cut(s) 2008
BseBI CCWGG 4 cut(s) 803, 1040, 1447, 1864
BseDI CCNNGG 3 cut(s) 548, 801, 1863
BseGI GGATG 7 cut(s) 232, 256, 355, 745, 998, 1003, 2140
BseJI GATNNNNATC 1 cut(s) 2008
BseLI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1072, 1855, 3282
BseMI GCAATG 2 cut(s) 424, 2791
BseMII CTCAG 8 cut(s) 104, 1524, 1557, 2139, 2496, 2850, 2853, 3216
BseNI ACTGG 8 cut(s) 512, 564, 1851, 2096, 2438, 2459, 2467, 2936
BseRI GAGGAG 5 cut(s) 483, 599, 1852, 2984, 3182
BseSI GKGCMC 2 cut(s) 369, 853
BseXI GCAGC 3 cut(s) 1560, 2623, 3260
BseYI CCCAGC 1 cut(s) 1997
BsgI GTGCAG 1 cut(s) 2829
Bsh1285I CGRYCG 1 cut(s) 924
BshFI GGCC 8 cut(s) 56, 851, 1097, 1445, 2630, 2794, 2976, 3271
BsiEI CGRYCG 1 cut(s) 924
BsiHKAI GWGCWC 1 cut(s) 1912
BsiSI CCGG 1 cut(s) 302
BslFI GGGAC 2 cut(s) 2106, 2918
BslI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1072, 1855, 3282
BsmAI GTCTC 9 cut(s) 21, 172, 465, 851, 1163, 1214, 2184, 2208, 2302
BsmBI CGTCTC 2 cut(s) 172, 2302
BsmFI GGGAC 2 cut(s) 2106, 2918
BsmI GAATGC 3 cut(s) 1824, 1873, 2589
BsnI GGCC 8 cut(s) 56, 851, 1097, 1445, 2630, 2794, 2976, 3271
Bso31I GGTCTC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 523
Bsp120I GGGCCC 1 cut(s) 849
Bsp1286I GDGCHC 3 cut(s) 369, 853, 1912
BspACI CCGC 2 cut(s) 57, 1587
BspANI GGCC 8 cut(s) 56, 851, 1097, 1445, 2630, 2794, 2976, 3271
BspCNI CTCAG 8 cut(s) 103, 1523, 1556, 2140, 2497, 2849, 2854, 3217
BspLI GGNNCC 5 cut(s) 851, 1524, 2906, 3183, 3204
BspPI GGATC 5 cut(s) 409, 788, 1262, 1733, 3227
BspT104I TTCGAA 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 465
BsrDI GCAATG 2 cut(s) 424, 2791
BsrI ACTGG 8 cut(s) 512, 564, 1851, 2096, 2438, 2459, 2467, 2936
BssECI CCNNGG 3 cut(s) 548, 801, 1863
BssT1I CCWWGG 1 cut(s) 548
Bst2UI CCWGG 4 cut(s) 803, 1040, 1447, 1864
Bst4CI ACNGT 9 cut(s) 239, 245, 1034, 1256, 1894, 2120, 2489, 2850, 3241
Bst6I CTCTTC 1 cut(s) 1827
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 3 cut(s) 54, 1328, 3273
BstEII GGTNACC 1 cut(s) 1500
BstF5I GGATG 7 cut(s) 232, 256, 355, 745, 998, 1003, 2140
BstH2I RGCGCY 1 cut(s) 3175
BstHHI GCGC 3 cut(s) 52, 2709, 3174
BstMAI GTCTC 9 cut(s) 21, 172, 465, 851, 1163, 1214, 2184, 2208, 2302
BstMCI CGRYCG 1 cut(s) 924
BstMWI GCNNNNNNNGC 5 cut(s) 56, 62, 2336, 2611, 3268
BstNI CCWGG 4 cut(s) 803, 1040, 1447, 1864
BstNSI RCATGY 2 cut(s) 2398, 3029
BstPI GGTNACC 1 cut(s) 1500
BstSCI CCNGG 4 cut(s) 801, 1038, 1445, 1862
BstSFI CTRYAG 1 cut(s) 1408
BstSLI GKGCMC 2 cut(s) 369, 853
BstV1I GCAGC 3 cut(s) 1560, 2623, 3260
BstV2I GAAGAC 3 cut(s) 117, 1980, 2469
BstX2I RGATCY 4 cut(s) 401, 1738, 2426, 2745
BstXI CCANNNNNNTGG 3 cut(s) 756, 1046, 2131
BstYI RGATCY 4 cut(s) 401, 1738, 2426, 2745
Bsu36I CCTNAGG 2 cut(s) 2836, 3225
BsuI GTATCC 1 cut(s) 612
BsuRI GGCC 8 cut(s) 56, 851, 1097, 1445, 2630, 2794, 2976, 3271
BtgZI GCGATG 1 cut(s) 1209
BtrI CACGTC 2 cut(s) 565, 2312
BtsCI GGATG 7 cut(s) 232, 256, 355, 745, 998, 1003, 2140
BtsI GCAGTG 1 cut(s) 3293
Cac8I GCNNGC 3 cut(s) 54, 1328, 3273
CfoI GCGC 3 cut(s) 52, 2709, 3174
Cfr13I GGNCC 8 cut(s) 552, 849, 850, 1522, 1607, 2567, 2905, 2974
CsiI ACCWGGT 1 cut(s) 1038
Csp6I GTAC 2 cut(s) 664, 2537
CviQI GTAC 2 cut(s) 664, 2537
DraIII CACNNNGTG 1 cut(s) 3058
DriI GACNNNNNGTC 1 cut(s) 1125
EaeI YGGCCR 1 cut(s) 2628
Eam1104I CTCTTC 1 cut(s) 1827
Eam1105I GACNNNNNGTC 1 cut(s) 1125
EarI CTCTTC 1 cut(s) 1827
Eco130I CCWWGG 1 cut(s) 548
Eco24I GRGCYC 1 cut(s) 853
Eco31I GGTCTC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 1390
Eco47I GGWCC 5 cut(s) 552, 1522, 1607, 2567, 2905
Eco47III AGCGCT 1 cut(s) 3173
Eco57I CTGAAG 7 cut(s) 45, 627, 1260, 1851, 2463, 3122, 3273
Eco81I CCTNAGG 2 cut(s) 2836, 3225
Eco91I GGTNACC 1 cut(s) 1500
EcoO109I RGGNCCY 2 cut(s) 849, 1522
EcoO65I GGTNACC 1 cut(s) 1500
EcoRI GAATTC 3 cut(s) 760, 1306, 3330
EcoRII CCWGG 4 cut(s) 801, 1038, 1445, 1862
EcoRV GATATC 1 cut(s) 1390
EcoT14I CCWWGG 1 cut(s) 548
EcoT22I ATGCAT 2 cut(s) 1163, 2679
EcoT38I GRGCYC 1 cut(s) 853
ErhI CCWWGG 1 cut(s) 548
Esp3I CGTCTC 2 cut(s) 172, 2302
FalI AAGNNNNNCTT 2 cut(s) 1759, 1791
FaqI GGGAC 2 cut(s) 2106, 2918
FauNDI CATATG 2 cut(s) 1744, 2928
FbaI TGATCA 6 cut(s) 1027, 1153, 1198, 2362, 2407, 3034
Fnu4HI GCNGC 4 cut(s) 57, 1574, 2612, 3249
FokI GGATG 7 cut(s) 239, 263, 362, 732, 985, 990, 2147
FriOI GRGCYC 1 cut(s) 853
Fsp4HI GCNGC 4 cut(s) 57, 1574, 2612, 3249
FspBI CTAG 3 cut(s) 1736, 1878, 2019
GlaI GCGC 3 cut(s) 51, 2708, 3173
GluI GCNGC 4 cut(s) 57, 1574, 2612, 3249
GsaI CCCAGC 1 cut(s) 2001
HaeII RGCGCY 1 cut(s) 3175
HaeIII GGCC 8 cut(s) 56, 851, 1097, 1445, 2630, 2794, 2976, 3271
HapII CCGG 1 cut(s) 302
HhaI GCGC 3 cut(s) 52, 2709, 3174
Hin6I GCGC 3 cut(s) 50, 2707, 3172
HinP1I GCGC 3 cut(s) 50, 2707, 3172
HindIII AAGCTT 1 cut(s) 1242
HpaII CCGG 1 cut(s) 302
Hpy166II GTNNAC 4 cut(s) 1559, 1827, 2116, 2472
Hpy188III TCNNGA 8 cut(s) 497, 605, 950, 1130, 1271, 1610, 2074, 2189
Hpy8I GTNNAC 4 cut(s) 1559, 1827, 2116, 2472
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 6 cut(s) 1558, 1914, 2094, 2228, 2860, 3107
HpyCH4III ACNGT 9 cut(s) 239, 245, 1034, 1256, 1894, 2120, 2489, 2850, 3241
HpyCH4IV ACGT 5 cut(s) 564, 2311, 2518, 2699, 3163
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 62, 2336, 2611, 3268
HpySE526I ACGT 5 cut(s) 564, 2311, 2518, 2699, 3163
HspAI GCGC 3 cut(s) 50, 2707, 3172
Ksp22I TGATCA 6 cut(s) 1027, 1153, 1198, 2362, 2407, 3034
LmnI GCTCC 8 cut(s) 318, 874, 2201, 2765, 3157, 3169, 3181, 3202
Lsp1109I GCAGC 3 cut(s) 1560, 2623, 3260
MabI ACCWGGT 1 cut(s) 1038
MaeI CTAG 3 cut(s) 1736, 1878, 2019
MaeII ACGT 5 cut(s) 564, 2311, 2518, 2699, 3163
MfeI CAATTG 1 cut(s) 1363
MflI RGATCY 4 cut(s) 401, 1738, 2426, 2745
MhlI GDGCHC 3 cut(s) 369, 853, 1912
MlsI TGGCCA 1 cut(s) 2630
MluNI TGGCCA 1 cut(s) 2630
MlyI GAGTC 9 cut(s) 230, 388, 443, 1013, 1813, 1849, 1868, 2649, 3308
MmeI TCCRAC 2 cut(s) 204, 737
Mox20I TGGCCA 1 cut(s) 2630
Mph1103I ATGCAT 2 cut(s) 1163, 2679
MroXI GAANNNNTTC 4 cut(s) 1278, 1417, 1696, 2550
MscI TGGCCA 1 cut(s) 2630
MslI CAYNNNNRTG 6 cut(s) 495, 819, 2370, 2487, 2851, 3030
Msp20I TGGCCA 1 cut(s) 2630
MspA1I CMGCKG 3 cut(s) 654, 2228, 3251
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 4 cut(s) 803, 1040, 1447, 1864
MunI CAATTG 1 cut(s) 1363
Mva1269I GAATGC 3 cut(s) 1824, 1873, 2589
MvaI CCWGG 4 cut(s) 803, 1040, 1447, 1864
MwoI GCNNNNNNNGC 5 cut(s) 56, 62, 2336, 2611, 3268
NdeI CATATG 2 cut(s) 1744, 2928
NlaIV GGNNCC 5 cut(s) 851, 1524, 2906, 3183, 3204
NmuCI GTSAC 6 cut(s) 239, 1117, 1333, 1500, 1715, 1805
NsiI ATGCAT 2 cut(s) 1163, 2679
NspI RCATGY 2 cut(s) 2398, 3029
NspV TTCGAA 1 cut(s) 523
OliI CACNNNNGTG 1 cut(s) 2851
PciI ACATGT 1 cut(s) 2394
PcsI WCGNNNNNNNCGW 1 cut(s) 458
PctI GAATGC 3 cut(s) 1824, 1873, 2589
PdmI GAANNNNTTC 4 cut(s) 1278, 1417, 1696, 2550
PflMI CCANNNNNTGG 1 cut(s) 419
PkrI GCNGC 4 cut(s) 58, 1575, 2613, 3250
PleI GAGTC 9 cut(s) 229, 388, 442, 1013, 1812, 1848, 1867, 2648, 3308
PpsI GAGTC 9 cut(s) 229, 388, 442, 1013, 1812, 1848, 1867, 2648, 3308
PpuMI RGGWCCY 1 cut(s) 1522
PscI ACATGT 1 cut(s) 2394
PshBI ATTAAT 2 cut(s) 2349, 2658
PsiI TTATAA 2 cut(s) 1617, 1962
Psp5II RGGWCCY 1 cut(s) 1522
Psp6I CCWGG 4 cut(s) 801, 1038, 1445, 1862
PspEI GGTNACC 1 cut(s) 1500
PspFI CCCAGC 1 cut(s) 1997
PspGI CCWGG 4 cut(s) 801, 1038, 1445, 1862
PspN4I GGNNCC 5 cut(s) 851, 1524, 2906, 3183, 3204
PspOMI GGGCCC 1 cut(s) 849
PspPI GGNCC 8 cut(s) 552, 849, 850, 1522, 1607, 2567, 2905, 2974
PspPPI RGGWCCY 1 cut(s) 1522
PsuI RGATCY 4 cut(s) 401, 1738, 2426, 2745
PvuII CAGCTG 3 cut(s) 654, 2228, 3251
RsaI GTAC 2 cut(s) 665, 2538
RsaNI GTAC 2 cut(s) 664, 2537
RseI CAYNNNNRTG 6 cut(s) 495, 819, 2370, 2487, 2851, 3030
SatI GCNGC 4 cut(s) 57, 1574, 2612, 3249
Sau96I GGNCC 8 cut(s) 552, 849, 850, 1522, 1607, 2567, 2905, 2974
ScaI AGTACT 1 cut(s) 665
SchI GAGTC 9 cut(s) 230, 388, 443, 1013, 1813, 1849, 1868, 2649, 3308
ScrFI CCNGG 4 cut(s) 803, 1040, 1447, 1864
SduI GDGCHC 3 cut(s) 369, 853, 1912
SexAI ACCWGGT 1 cut(s) 1038
SfcI CTRYAG 1 cut(s) 1408
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 5 cut(s) 552, 1522, 1607, 2567, 2905
SmiMI CAYNNNNRTG 6 cut(s) 495, 819, 2370, 2487, 2851, 3030
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
SpeI ACTAGT 1 cut(s) 2018
SsiI CCGC 2 cut(s) 57, 1587
SspI AATATT 1 cut(s) 2168
SspMI CTAG 3 cut(s) 1736, 1878, 2019
StyD4I CCNGG 4 cut(s) 801, 1038, 1445, 1862
StyI CCWWGG 1 cut(s) 548
TaaI ACNGT 9 cut(s) 239, 245, 1034, 1256, 1894, 2120, 2489, 2850, 3241
TaiI ACGT 5 cut(s) 567, 2314, 2521, 2702, 3166
TaqI TCGA 8 cut(s) 45, 523, 541, 2023, 2188, 2385, 2717, 2777
TaqII GACCGA 2 cut(s) 938, 2922
TatI WGTACW 1 cut(s) 663
TauI GCSGC 1 cut(s) 59
TseFI GTSAC 6 cut(s) 239, 1117, 1333, 1500, 1715, 1805
TseI GCWGC 3 cut(s) 1573, 2611, 3248
Tsp45I GTSAC 6 cut(s) 239, 1117, 1333, 1500, 1715, 1805
Van91I CCANNNNNTGG 1 cut(s) 419
VpaK11BI GGWCC 5 cut(s) 552, 1522, 1607, 2567, 2905
VspI ATTAAT 2 cut(s) 2349, 2658
XapI RAATTY 8 cut(s) 760, 1306, 1549, 1693, 2531, 2549, 2894, 3330
XceI RCATGY 2 cut(s) 2398, 3029
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 436, 562
XmnI GAANNNNTTC 4 cut(s) 1278, 1417, 1696, 2550
XspI CTAG 3 cut(s) 1736, 1878, 2019
ZrmI AGTACT 1 cut(s) 665
Zsp2I ATGCAT 2 cut(s) 1163, 2679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.