Cofactor assembly of complex C subunit B, CCB2/CCB4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G59840 AT1G59840 AT1G59840 |
| fragaria_vesca | FvH4_4g35320 |
| malus_domestica | MD13G1084200.v1.1 |
| prunus_persica | Prupe.1G262600_v2.0.a1 Prupe.1G262600_v2.0.a1 |
| pyrus_communis | pycom13g07270 |
| rosa_chinensis | RchiOBHm_Chr4g0444951 |
| rosa_laevigata | RLG00000005784 |
| rosa_multiflora | Rmu_co8283785.1_g000001 Rmu_sc0011561.1_g000003 Rmu_sc0026817.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074040 Rroxscaffold_5G00385440 |
| rosa_rugosa | Rorug04G0356500 Rorug04G0356500 Rorug04G0356600 Rorug04G0356700 |
| rosa_samantha | Rh4AG418200 Rh4BG429900 Rh4CG444600 Rh4DG239800 Rh4DG425800 |
| rosa_wichuraiana | Rw4G035830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 84, 97 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 307 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 209 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AluBI | AGCT | 4 cut(s) | 129, 146, 172, 258 |
| AluI | AGCT | 4 cut(s) | 129, 146, 172, 258 |
| Alw26I | GTCTC | 1 cut(s) | 193 |
| AlwI | GGATC | 2 cut(s) | 84, 97 |
| ApeKI | GCWGC | 3 cut(s) | 5, 172, 213 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 62 |
| AsuII | TTCGAA | 1 cut(s) | 253 |
| BamHI | GGATCC | 1 cut(s) | 89 |
| BbvI | GCAGC | 3 cut(s) | 17, 159, 225 |
| BccI | CCATC | 2 cut(s) | 41, 227 |
| BceAI | ACGGC | 1 cut(s) | 41 |
| BcoDI | GTCTC | 1 cut(s) | 193 |
| BfaI | CTAG | 1 cut(s) | 143 |
| BisI | GCNGC | 3 cut(s) | 6, 173, 214 |
| BlsI | GCNGC | 3 cut(s) | 7, 174, 215 |
| BmiI | GGNNCC | 1 cut(s) | 91 |
| Bpu14I | TTCGAA | 1 cut(s) | 253 |
| BsaI | GGTCTC | 1 cut(s) | 193 |
| BsaJI | CCNNGG | 1 cut(s) | 57 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseDI | CCNNGG | 1 cut(s) | 57 |
| BseGI | GGATG | 1 cut(s) | 73 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseXI | GCAGC | 3 cut(s) | 17, 159, 225 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BsmAI | GTCTC | 1 cut(s) | 193 |
| Bso31I | GGTCTC | 1 cut(s) | 193 |
| Bsp119I | TTCGAA | 1 cut(s) | 253 |
| Bsp143I | GATC | 1 cut(s) | 89 |
| BspLI | GGNNCC | 1 cut(s) | 91 |
| BspPI | GGATC | 2 cut(s) | 84, 97 |
| BspT104I | TTCGAA | 1 cut(s) | 253 |
| BspTNI | GGTCTC | 1 cut(s) | 193 |
| BssECI | CCNNGG | 1 cut(s) | 57 |
| BssMI | GATC | 1 cut(s) | 89 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 14 |
| BstBI | TTCGAA | 1 cut(s) | 253 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstDSI | CCRYGG | 1 cut(s) | 57 |
| BstF5I | GGATG | 1 cut(s) | 73 |
| BstKTI | GATC | 1 cut(s) | 92 |
| BstMAI | GTCTC | 1 cut(s) | 193 |
| BstMBI | GATC | 1 cut(s) | 89 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstV1I | GCAGC | 3 cut(s) | 17, 159, 225 |
| BstX2I | RGATCY | 1 cut(s) | 89 |
| BstYI | RGATCY | 1 cut(s) | 89 |
| BtgI | CCRYGG | 1 cut(s) | 57 |
| BtsCI | GGATG | 1 cut(s) | 73 |
| Csp6I | GTAC | 1 cut(s) | 306 |
| CviJI | RGCY | 7 cut(s) | 56, 62, 129, 146, 172, 243, 258 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 62, 129, 146, 172, 243, 258 |
| CviQI | GTAC | 1 cut(s) | 306 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DpnI | GATC | 1 cut(s) | 91 |
| DpnII | GATC | 1 cut(s) | 89 |
| Eco31I | GGTCTC | 1 cut(s) | 193 |
| EcoRI | GAATTC | 1 cut(s) | 120 |
| FaiI | YATR | 4 cut(s) | 15, 65, 278, 325 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 173, 214 |
| FokI | GGATG | 1 cut(s) | 80 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 173, 214 |
| FspBI | CTAG | 1 cut(s) | 143 |
| GluI | GCNGC | 3 cut(s) | 6, 173, 214 |
| HincII | GTYRAC | 1 cut(s) | 139 |
| HindII | GTYRAC | 1 cut(s) | 139 |
| HindIII | AAGCTT | 1 cut(s) | 256 |
| HinfI | GANTC | 2 cut(s) | 82, 164 |
| HphI | GGTGA | 2 cut(s) | 56, 62 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy188I | TCNGA | 2 cut(s) | 126, 169 |
| Hpy188III | TCNNGA | 2 cut(s) | 109, 117 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Kzo9I | GATC | 1 cut(s) | 89 |
| LpnPI | CCDG | 3 cut(s) | 3, 39, 102 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 159, 225 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MalI | GATC | 1 cut(s) | 91 |
| MboI | GATC | 1 cut(s) | 89 |
| MboII | GAAGA | 1 cut(s) | 27 |
| MflI | RGATCY | 1 cut(s) | 89 |
| MluCI | AATT | 1 cut(s) | 120 |
| MnlI | CCTC | 3 cut(s) | 104, 275, 301 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 1 cut(s) | 89 |
| NlaIV | GGNNCC | 1 cut(s) | 91 |
| NspV | TTCGAA | 1 cut(s) | 253 |
| PfeI | GAWTC | 2 cut(s) | 82, 164 |
| PkrI | GCNGC | 3 cut(s) | 7, 174, 215 |
| PspN4I | GGNNCC | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 89 |
| RsaI | GTAC | 1 cut(s) | 307 |
| RsaNI | GTAC | 1 cut(s) | 306 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| SatI | GCNGC | 3 cut(s) | 6, 173, 214 |
| Sau3AI | GATC | 1 cut(s) | 89 |
| SetI | ASST | 8 cut(s) | 106, 131, 144, 148, 174, 205, 260, 286 |
| SfuI | TTCGAA | 1 cut(s) | 253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SspMI | CTAG | 1 cut(s) | 143 |
| TaqI | TCGA | 1 cut(s) | 253 |
| TasI | AATT | 1 cut(s) | 120 |
| TfiI | GAWTC | 2 cut(s) | 82, 164 |
| TseI | GCWGC | 3 cut(s) | 5, 172, 213 |
| TspDTI | ATGAA | 2 cut(s) | 177, 312 |
| XapI | RAATTY | 1 cut(s) | 120 |
| XspI | CTAG | 1 cut(s) | 143 |