No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1135000.v1.1 |
| pyrus_communis | pycom06g12600 pycom06g12660 |
| rosa_chinensis | RchiOBHm_Chr7g0182801 RchiOBHm_Chr7g0189211 |
| rosa_multiflora | Rmu_sc0000239.1_g000045 |
| rosa_roxburghii | Rroxscaffold_172G00445440 Rroxscaffold_2G00103850 Rroxscaffold_2G00125400 Rroxscaffold_2G00129600 Rroxscaffold_3G00220580 Rroxscaffold_3G00234810 Rroxscaffold_3G00243090 Rroxscaffold_3G00265650 Rroxscaffold_4G00330820 Rroxscaffold_6G00425560 Rroxscaffold_7G00169720 Rroxscaffold_7G00190290 Rroxscaffold_7G00204940 Rroxscaffold_7G00208230 |
| rosa_samantha | Rh4BG005500 Rh4BG099100 Rh6BG169400 Rh7CG152700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 224 |
| AcuI | CTGAAG | 2 cut(s) | 74, 156 |
| AfaI | GTAC | 1 cut(s) | 216 |
| AgsI | TTSAA | 1 cut(s) | 100 |
| AluBI | AGCT | 3 cut(s) | 11, 88, 94 |
| AluI | AGCT | 3 cut(s) | 11, 88, 94 |
| Ama87I | CYCGRG | 1 cut(s) | 194 |
| AoxI | GGCC | 1 cut(s) | 224 |
| ApeKI | GCWGC | 6 cut(s) | 5, 8, 56, 112, 164, 199 |
| AvaI | CYCGRG | 1 cut(s) | 194 |
| BbvI | GCAGC | 5 cut(s) | 20, 43, 99, 151, 186 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BfmI | CTRYAG | 3 cut(s) | 6, 31, 119 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BisI | GCNGC | 6 cut(s) | 6, 9, 57, 113, 165, 200 |
| BlsI | GCNGC | 6 cut(s) | 7, 10, 58, 114, 166, 201 |
| BmeT110I | CYCGRG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 1 cut(s) | 27 |
| BseNI | ACTGG | 1 cut(s) | 27 |
| BseXI | GCAGC | 5 cut(s) | 20, 43, 99, 151, 186 |
| BshFI | GGCC | 1 cut(s) | 226 |
| BsiHKCI | CYCGRG | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 226 |
| BsoBI | CYCGRG | 1 cut(s) | 194 |
| BspANI | GGCC | 1 cut(s) | 226 |
| BspMAI | CTGCAG | 2 cut(s) | 10, 123 |
| BsrI | ACTGG | 1 cut(s) | 27 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 118 |
| BstSFI | CTRYAG | 3 cut(s) | 6, 31, 119 |
| BstV1I | GCAGC | 5 cut(s) | 20, 43, 99, 151, 186 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| BsuRI | GGCC | 1 cut(s) | 226 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| Csp6I | GTAC | 1 cut(s) | 215 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 57, 92 |
| CviJI | RGCY | 7 cut(s) | 5, 11, 56, 88, 94, 199, 226 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 11, 56, 88, 94, 199, 226 |
| CviQI | GTAC | 1 cut(s) | 215 |
| EaeI | YGGCCR | 1 cut(s) | 224 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 156 |
| Eco88I | CYCGRG | 1 cut(s) | 194 |
| FaiI | YATR | 1 cut(s) | 229 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 9, 57, 113, 165, 200 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 9, 57, 113, 165, 200 |
| GluI | GCNGC | 6 cut(s) | 6, 9, 57, 113, 165, 200 |
| HaeIII | GGCC | 1 cut(s) | 226 |
| HindIII | AAGCTT | 1 cut(s) | 86 |
| HinfI | GANTC | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 189 |
| Hpy188III | TCNNGA | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 5 cut(s) | 8, 59, 115, 121, 142 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 118 |
| LpnPI | CCDG | 2 cut(s) | 8, 107 |
| Lsp1109I | GCAGC | 5 cut(s) | 20, 43, 99, 151, 186 |
| MluCI | AATT | 2 cut(s) | 71, 219 |
| MseI | TTAA | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 118 |
| PfeI | GAWTC | 1 cut(s) | 190 |
| PkrI | GCNGC | 6 cut(s) | 7, 10, 58, 114, 166, 201 |
| PstI | CTGCAG | 2 cut(s) | 10, 123 |
| RsaI | GTAC | 1 cut(s) | 216 |
| RsaNI | GTAC | 1 cut(s) | 215 |
| SaqAI | TTAA | 1 cut(s) | 177 |
| SatI | GCNGC | 6 cut(s) | 6, 9, 57, 113, 165, 200 |
| SetI | ASST | 6 cut(s) | 13, 65, 90, 96, 161, 210 |
| SfcI | CTRYAG | 3 cut(s) | 6, 31, 119 |
| SgeI | CNNG | 9 cut(s) | 35, 76, 112, 134, 151, 164, 206, 208, 215 |
| Sse9I | AATT | 2 cut(s) | 71, 219 |
| TasI | AATT | 2 cut(s) | 71, 219 |
| TatI | WGTACW | 1 cut(s) | 214 |
| TfiI | GAWTC | 1 cut(s) | 190 |
| Tru1I | TTAA | 1 cut(s) | 177 |
| Tru9I | TTAA | 1 cut(s) | 177 |
| TseI | GCWGC | 6 cut(s) | 5, 8, 56, 112, 164, 199 |