Rroxscaffold_4G00303600

lactoylglutathione

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
23970459 .. 23970713
255 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_4G00303600.1

Sequence Viewer

Length: 255 bp
ATGAATCGGACGAAAGAAGAAGAAATTGATGAGGATATTCGTCGCTTCGGAGCTTCGGAATTGCCCAAGAAGGACAAGCGCCGCCTCCTCCACGCCGTGTACCGCATCGGCGATCTCGATCGCACCATCAAGTTTTACACCGAGGCTCTTGGGAAGAAGGCGTTGCTGCGAGGGACATTCGGAAGAGAAGTACTCGAATGCTTTCCTCGGATTCGGGCTAGAAGAAACGAACTTTGTAATGGAGCTCACTTATAA

Protein Analysis

84

Amino Acids

9.9

Weight (kDa)

9.75

Isoelectric Point (pI)

54.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 253
AciI CCGC 2 cut(s) 82, 103
AdeI CACNNNGTG 1 cut(s) 97
AfaI GTAC 2 cut(s) 101, 192
AluBI AGCT 2 cut(s) 53, 245
AluI AGCT 2 cut(s) 53, 245
Alw21I GWGCWC 1 cut(s) 247
ApeKI GCWGC 1 cut(s) 166
Asp700I GAANNNNTTC 1 cut(s) 201
AspLEI GCGC 1 cut(s) 81
BanII GRGCYC 1 cut(s) 247
Bbv12I GWGCWC 1 cut(s) 247
BbvI GCAGC 1 cut(s) 153
BccI CCATC 1 cut(s) 134
BceAI ACGGC 1 cut(s) 80
BfaI CTAG 1 cut(s) 219
BfoI RGCGCY 1 cut(s) 82
BisI GCNGC 2 cut(s) 82, 167
BlsI GCNGC 2 cut(s) 83, 168
BmcAI AGTACT 1 cut(s) 192
BmsI GCATC 1 cut(s) 114
BplI GAGNNNNNCTC 2 cut(s) 177, 209
BsaBI GATNNNNATC 1 cut(s) 117
BsaJI CCNNGG 2 cut(s) 141, 206
Bse8I GATNNNNATC 1 cut(s) 117
BseDI CCNNGG 2 cut(s) 141, 206
BseJI GATNNNNATC 1 cut(s) 117
BseRI GAGGAG 1 cut(s) 77
BseXI GCAGC 1 cut(s) 153
Bsh1285I CGRYCG 1 cut(s) 121
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 247
BslFI GGGAC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 187
BsmI GAATGC 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 247
Bsp143I GATC 2 cut(s) 112, 118
BspACI CCGC 2 cut(s) 82, 103
BssECI CCNNGG 2 cut(s) 141, 206
BssMI GATC 2 cut(s) 112, 118
Bst6I CTCTTC 1 cut(s) 178
BstH2I RGCGCY 1 cut(s) 82
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 2 cut(s) 115, 121
BstMBI GATC 2 cut(s) 112, 118
BstMCI CGRYCG 1 cut(s) 121
BstV1I GCAGC 1 cut(s) 153
CfoI GCGC 1 cut(s) 81
Csp6I GTAC 2 cut(s) 100, 191
CviJI RGCY 4 cut(s) 53, 146, 218, 245
CviKI_1 RGCY 4 cut(s) 53, 146, 218, 245
CviQI GTAC 2 cut(s) 100, 191
DpnI GATC 2 cut(s) 114, 120
DpnII GATC 2 cut(s) 112, 118
DraIII CACNNNGTG 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 178
EarI CTCTTC 1 cut(s) 178
Ecl136II GAGCTC 1 cut(s) 245
Eco24I GRGCYC 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 245
EcoICRI GAGCTC 1 cut(s) 245
EcoT38I GRGCYC 1 cut(s) 247
FaiI YATR 1 cut(s) 253
FaqI GGGAC 1 cut(s) 187
Fnu4HI GCNGC 2 cut(s) 82, 167
FriOI GRGCYC 1 cut(s) 247
Fsp4HI GCNGC 2 cut(s) 82, 167
FspBI CTAG 1 cut(s) 219
GlaI GCGC 1 cut(s) 80
GluI GCNGC 2 cut(s) 82, 167
HaeII RGCGCY 1 cut(s) 82
HhaI GCGC 1 cut(s) 81
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HinfI GANTC 2 cut(s) 4, 211
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 5 cut(s) 9, 50, 58, 182, 210
Hpy188III TCNNGA 1 cut(s) 116
Hpy8I GTNNAC 1 cut(s) 100
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 2 cut(s) 64, 151
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 2 cut(s) 112, 118
LmnI GCTCC 2 cut(s) 50, 242
Lsp1109I GCAGC 1 cut(s) 153
LweI GCATC 1 cut(s) 114
MaeI CTAG 1 cut(s) 219
MalI GATC 2 cut(s) 114, 120
MboI GATC 2 cut(s) 112, 118
MboII GAAGA 5 cut(s) 29, 32, 166, 195, 234
MhlI GDGCHC 1 cut(s) 247
MluCI AATT 2 cut(s) 24, 59
MnlI CCTC 6 cut(s) 25, 95, 98, 136, 164, 216
MroXI GAANNNNTTC 1 cut(s) 201
Mva1269I GAATGC 1 cut(s) 203
NdeII GATC 2 cut(s) 112, 118
PcsI WCGNNNNNNNCGW 1 cut(s) 114
PctI GAATGC 1 cut(s) 203
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 2 cut(s) 4, 211
PkrI GCNGC 2 cut(s) 83, 168
Ple19I CGATCG 1 cut(s) 121
PsiI TTATAA 1 cut(s) 253
Psp124BI GAGCTC 1 cut(s) 247
PvuI CGATCG 1 cut(s) 121
RsaI GTAC 2 cut(s) 101, 192
RsaNI GTAC 2 cut(s) 100, 191
SacI GAGCTC 1 cut(s) 247
SatI GCNGC 2 cut(s) 82, 167
Sau3AI GATC 2 cut(s) 112, 118
ScaI AGTACT 1 cut(s) 192
SduI GDGCHC 1 cut(s) 247
SetI ASST 2 cut(s) 55, 247
SfaNI GCATC 1 cut(s) 114
Sse9I AATT 2 cut(s) 24, 59
SsiI CCGC 2 cut(s) 82, 103
SspMI CTAG 1 cut(s) 219
SstI GAGCTC 1 cut(s) 247
TaqI TCGA 2 cut(s) 117, 195
TasI AATT 2 cut(s) 24, 59
TatI WGTACW 1 cut(s) 190
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 2 cut(s) 4, 211
TseI GCWGC 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 17
XmnI GAANNNNTTC 1 cut(s) 201
XspI CTAG 1 cut(s) 219
ZrmI AGTACT 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.