Rh7CG001100

lactoylglutathione

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0010618
Physical Location & Seq
Reverse (-)
162475 .. 163771
1297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG001100.1

Sequence Viewer

Length: 306 bp
ATGAGGATATTCTTCGCTTCGGAGCTTCTGGAATTGCCCAAGAAGGACAAGCGCTGCCTCCTCCACACCGTGTACCGCATCGGCGATCTCGAGCGCACCATCAAGTTTTACACCAAGGCTCTTGGGATGAAGCTATTGCGGCATAGGGATATTCCGGAAGATAAGTACTCGAATGCTTTCCTCGGATTCGAGCCGGAAGAAACGAACTTTGTAATGGAGCTCACTTACAATTATGGAGTAATTCCTATGATATTGGGATTGGGTTTGGTTACAAAAGAGCTTGGAGGAAAGATAACAAGGGAGTAG

Protein Analysis

101

Amino Acids

11.79

Weight (kDa)

8.71

Isoelectric Point (pI)

23.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 21 - 61 3.3e-08 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 154
AciI CCGC 2 cut(s) 76, 139
AdeI CACNNNGTG 1 cut(s) 70
AfaI GTAC 2 cut(s) 74, 167
AfeI AGCGCT 1 cut(s) 53
AluBI AGCT 4 cut(s) 25, 133, 220, 280
AluI AGCT 4 cut(s) 25, 133, 220, 280
Alw21I GWGCWC 1 cut(s) 222
Ama87I CYCGRG 1 cut(s) 89
Aor13HI TCCGGA 1 cut(s) 154
Aor51HI AGCGCT 1 cut(s) 53
ApeKI GCWGC 1 cut(s) 54
Asp700I GAANNNNTTC 1 cut(s) 176
AspLEI GCGC 2 cut(s) 54, 96
AvaI CYCGRG 1 cut(s) 89
BanII GRGCYC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 222
BbvI GCAGC 1 cut(s) 41
BccI CCATC 1 cut(s) 107
BfoI RGCGCY 1 cut(s) 55
BisI GCNGC 2 cut(s) 55, 140
BlsI GCNGC 2 cut(s) 56, 141
BmcAI AGTACT 1 cut(s) 167
BmeT110I CYCGRG 1 cut(s) 89
BmsI GCATC 1 cut(s) 87
BsaJI CCNNGG 2 cut(s) 114, 181
BsaWI WCCGGW 1 cut(s) 154
BseAI TCCGGA 1 cut(s) 154
BseDI CCNNGG 2 cut(s) 114, 181
BseGI GGATG 1 cut(s) 132
BseRI GAGGAG 1 cut(s) 50
BseXI GCAGC 1 cut(s) 41
BsiHKAI GWGCWC 1 cut(s) 222
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 2 cut(s) 155, 194
BsmI GAATGC 1 cut(s) 178
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 222
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 1 cut(s) 85
BspACI CCGC 2 cut(s) 76, 139
BspEI TCCGGA 1 cut(s) 154
BssECI CCNNGG 2 cut(s) 114, 181
BssMI GATC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 114
Bst4CI ACNGT 1 cut(s) 70
BstF5I GGATG 1 cut(s) 132
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 2 cut(s) 54, 96
BstKTI GATC 1 cut(s) 88
BstMBI GATC 1 cut(s) 85
BstMWI GCNNNNNNNGC 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 41
BtsCI GGATG 1 cut(s) 132
CfoI GCGC 2 cut(s) 54, 96
Csp6I GTAC 2 cut(s) 73, 166
CviJI RGCY 6 cut(s) 25, 119, 133, 193, 220, 280
CviKI_1 RGCY 6 cut(s) 25, 119, 133, 193, 220, 280
CviQI GTAC 2 cut(s) 73, 166
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
DraIII CACNNNGTG 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 222
Eco47III AGCGCT 1 cut(s) 53
Eco53kI GAGCTC 1 cut(s) 220
Eco88I CYCGRG 1 cut(s) 89
EcoICRI GAGCTC 1 cut(s) 220
EcoT14I CCWWGG 1 cut(s) 114
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 114
FaiI YATR 3 cut(s) 144, 234, 248
Fnu4HI GCNGC 2 cut(s) 55, 140
FokI GGATG 1 cut(s) 139
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 2 cut(s) 55, 140
GlaI GCGC 2 cut(s) 53, 95
GluI GCNGC 2 cut(s) 55, 140
HaeII RGCGCY 1 cut(s) 55
HapII CCGG 2 cut(s) 155, 194
HhaI GCGC 2 cut(s) 54, 96
Hin6I GCGC 2 cut(s) 52, 94
HinP1I GCGC 2 cut(s) 52, 94
HinfI GANTC 1 cut(s) 186
HpaII CCGG 2 cut(s) 155, 194
Hpy166II GTNNAC 1 cut(s) 73
Hpy188I TCNGA 2 cut(s) 22, 185
Hpy188III TCNNGA 3 cut(s) 29, 89, 155
Hpy8I GTNNAC 1 cut(s) 73
HpyAV CCTTC 1 cut(s) 37
HpyCH4III ACNGT 1 cut(s) 70
HpyF10VI GCNNNNNNNGC 1 cut(s) 139
HspAI GCGC 2 cut(s) 52, 94
Kpn2I TCCGGA 1 cut(s) 154
Kzo9I GATC 1 cut(s) 85
LmnI GCTCC 2 cut(s) 22, 217
LpnPI CCDG 3 cut(s) 14, 168, 207
Lsp1109I GCAGC 1 cut(s) 41
LweI GCATC 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 268
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MboII GAAGA 3 cut(s) 4, 170, 209
MhlI GDGCHC 1 cut(s) 222
MluCI AATT 3 cut(s) 32, 229, 240
MnlI CCTC 4 cut(s) 68, 71, 191, 278
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 176
MspI CCGG 2 cut(s) 155, 194
Mva1269I GAATGC 1 cut(s) 178
MwoI GCNNNNNNNGC 1 cut(s) 139
NdeII GATC 1 cut(s) 85
PaeR7I CTCGAG 1 cut(s) 89
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 1 cut(s) 178
PdmI GAANNNNTTC 1 cut(s) 176
PfeI GAWTC 1 cut(s) 186
PkrI GCNGC 2 cut(s) 56, 141
Psp124BI GAGCTC 1 cut(s) 222
RsaI GTAC 2 cut(s) 74, 167
RsaNI GTAC 2 cut(s) 73, 166
SacI GAGCTC 1 cut(s) 222
SatI GCNGC 2 cut(s) 55, 140
Sau3AI GATC 1 cut(s) 85
ScaI AGTACT 1 cut(s) 167
SduI GDGCHC 1 cut(s) 222
SetI ASST 4 cut(s) 27, 135, 222, 282
SfaNI GCATC 1 cut(s) 87
Sfr274I CTCGAG 1 cut(s) 89
SlaI CTCGAG 1 cut(s) 89
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
Sse9I AATT 3 cut(s) 32, 229, 240
SsiI CCGC 2 cut(s) 76, 139
SstI GAGCTC 1 cut(s) 222
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 1 cut(s) 70
TaqI TCGA 3 cut(s) 90, 170, 189
TasI AATT 3 cut(s) 32, 229, 240
TatI WGTACW 1 cut(s) 165
TauI GCSGC 1 cut(s) 142
TfiI GAWTC 1 cut(s) 186
TseI GCWGC 1 cut(s) 54
TspDTI ATGAA 1 cut(s) 143
XhoI CTCGAG 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 176
ZrmI AGTACT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.