Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010618

Physical Location & Seq

Genomic Coordinates Forward (+)

16417302 .. 16419960

Gene Structure 2659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0176000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGAGATCATTTCTAGCTTGCTTTCTTTTGTATGTTCACCTCGTTTCATCACCAAACAATGCTTTTGCTTCTGTTAGTTCTAGTTCTAGTTCTAGTGAAGCAAAGGCCCTTCTAAAATGGAAAGCCAGTTTTCAAAACCAAACCCAGAATAACCTGACCTCATGGACTTACTCTCCCAGTAATTCCACCAATCCAAAAGCAAATGCAAGTCCATGCAATGGTTGGACAGGCATTACATGCAATACTGTTGGAAGTGTCAACAGGATAAACCTTAGCAATTCTGGCATTCAAGGTACGCTTCGTGAATTATCATTCTTGTCCTTCCCTAATCTTGAATATCTTGATCTTAGCTTCAATGAACTCAATGGTTCCATTCCCCCTTCAATTGGTGGCTTGAGTAATTTAGTTTTCTTATACCTCCGTCATAATCAACTTTCTGGCTCCGTCCCCCAAGAGATAGGGAATCTCAAGAAGTTGACTGTACTCAAGTTGGATACTAACCAACTTTCTGGTCATTTACCCCAAAATATTTGCCGTGGTGGATCACTGCAAAACTTTACAGTACAAACCAACCGATTGACCGGTCCAATCCCCAAAAGCTTGAAAATGTGCAAGAGTTTAATCAGAGTCCGCCTTCAAGATAACCATTTGACAGGCAACATATTTGAAGCATTTGGTGCCTATCCAAATCTTCGATATATAGACCTTAGCCACAACAACTTCTACGGTAAAATTTCACCCATGTGGGGACAATGTCCTCAGTTAACAGCCCTACGAATTGCAGGAAACATCCTTACTGGTAGCATACCACCTGAGCTTGGCAATGCAACGAAGATTCAGTTACTCGATCTTTCTTCAAATGGTTTAGTTGGAGTGATTCCAAATGAGATTGGGAGATTGACTTCACTGTTGAATCTCACTTTGAATGATAATCAACTTTGGGGTCGCATACCCTTAGAGTTTGGGTCATTCAAGGATCTTGAATATCTTGACATGTCAATCAACAAATTGAATGAGTCAATTCCAAGCATTTTAGGTGACTTTTCCAAATTACACTACTTGAATTTGAGCAATAACAAATTCAGCCAAGAAATTCCATTTCAATTGGGGAAATTAGTCCACCTGTCCCAGCTAGACTTGAGTTACAATTCGCTTGAGGATCAAATACCATCAGAAATTAGCCAAATGCAAAGCTTGGAAATTCTGAATATTTCCCACAATAATCTTTCTGGTTCAATACCCAAAAATTTCGAACAAATGCATAGCTTGGTTCAAATTGACATATCCTACAACCAGTTGCAGGGTCCCGTCCCCAACAACAAAGCATTTCATGATGGCGCTTTGGAAGGCAATGAAGGATTGTGTGGCAATGTTGCAGGGCTTCAACCCTGCAATATTCCCTCCATGGAAACTAAGCATTCCTCAAAATCTGATAGAAGACACTTGTTTTTAATTGTTTTCCCTATTCTAGGAACACTTCTACTTGTACTTGTCGTCCTTGCAATTGCCTTGGTTGGAAAAAGAAGAAAAACAGAGCAGGAAACAAAGCAGAGCAATGTGCAACACCAAAATTTTTTTTCCATATCTGAATTCGATGGAAGAAGAATGTATGAAGAAATCATCAAGGCAACCAATGATTTTGATGCTCTATATTGCATCGGCAAGGGGGGATCCGGAAGTGTTTACAAGGCAAAGCTGCTATCCGGCAGCGTAGTTGCAGTGAAGAAACTCCACCCAATACTTGATGGTGAGGAGACATCTCGGAAGGAATTCCTTAACGAAATACGTGCACTTCTAGAGATACGACACCGGAACATTGTGAGTTTCCGTGGTTTTTGTTCACATGCTCATCACTCGTTTTTGGTCTATGACTACCTAGAAAAAGGTAGTTTGGCTTCAATCCTGAGCAAAGAATACGAAGCTAACAAACTGGACTGGAGCACAAGGGTGAGAATTGTAAAAGGTGTAGCTCATGCCCTCTCTTATATGCACCATGATTGCTCTCCCCCCATTGTGCATCGAGACATATCAAGCAACAACATACTGCTCAATTACGAATATGAGCCCGTTCTTTCAGACTTTGGCACGGCTAAGCTTTTAAATCCAGACTCATCGAATTGGACTGCCCCCGCAGGCACATATGGATATATAGCACCAGAGCTTGCTTATACAATGAAGGTTACCAAGAAATGTGATGTTTATAGCTTTGGGGTGCTGGCGCTGGAAGTGATAATGGGAAAGCAGCTGGCTGATTTCGTGTCCTCCTTTTCGACTCCATCCGCCAATGGAGACATATTGCTGAAGGATGTTTTCGACCAACGCCTCCCCCCTCCTACACCGGAAATTGAGAATGAACTGATAACAATTGCTAGGCTAGCAATTGCATGCAAACATTCCGATCCACAATCTAGGCCAACAATGTACAAGGTTTCTCAAGTGTTGTCATCCCAACCTGCAAATTCCTTTAGACTACCAGAGATTACTCTTGAACAACTCATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004462 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0006081 GO:0006082 GO:0006089 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009438 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016151 GO:0016829 GO:0016846 GO:0019243 GO:0019752 GO:0019863 GO:0019865 GO:0031967 GO:0031975 GO:0032787 GO:0042180 GO:0042182 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046185 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0051596 GO:0061727 GO:0071704 GO:0071944 GO:1901575 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

834

Amino Acids

92.45

Weight (kDa)

7.88

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	86 - 145	6.3e-08	Leucine rich repeat
LRR_14	PF23598	103 - 237	3.4e-08	Leucine-rich repeat region
LRR_14	PF23598	322 - 428	1.7e-10	Leucine-rich repeat region
LRR_8	PF13855	374 - 433	8.9e-09	Leucine rich repeat
Pkinase	PF00069	552 - 811	6.1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	553 - 813	3.3e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010618)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0110191 RchiOBHm_Chr4g0413001
rosa_laevigata	RLG00000009902 RLG00000022903
rosa_multiflora	Rmu_sc0020732.1_g000002
rosa_roxburghii	Rroxscaffold_4G00303600
rosa_rugosa	Rorug04G0159500 Rorug05G0176000 Rorug06G0078000
rosa_samantha	Rh2AG218600 Rh2AG399700 Rh2BG092100 Rh2BG408500 Rh2DG224500 Rh4AG177000 Rh4CG187900 Rh6BG398900 Rh7AG001300 Rh7CG001100 Rh7CG452500 Rh7DG001400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2461
AccB1I	GGYRCC	1 cut(s)	677
AccB7I	CCANNNNNTGG	1 cut(s)	218
AccIII	TCCGGA	1 cut(s)	1673
AciI	CCGC	3 cut(s)	631, 2130, 2280
AclWI	GGATC	6 cut(s)	550, 984, 1167, 1665, 1678, 2393
AcuI	CTGAAG	1 cut(s)	2321
AfaI	GTAC	5 cut(s)	295, 483, 564, 1488, 2423
AfiI	CCNNNNNNNGG	6 cut(s)	218, 386, 746, 818, 1300, 1469
AflIII	ACRYGT	1 cut(s)	993
AgeI	ACCGGT	1 cut(s)	581
AleI	CACNNNNGTG	2 cut(s)	742, 1946
Alw21I	GWGCWC	2 cut(s)	1792, 1943
Alw26I	GTCTC	3 cut(s)	1748, 2016, 2283
Alw44I	GTGCAC	1 cut(s)	1788
AlwI	GGATC	6 cut(s)	550, 984, 1167, 1665, 1678, 2393
Aor13HI	TCCGGA	1 cut(s)	1673
AoxI	GGCC	2 cut(s)	105, 2411
ApaLI	GTGCAC	1 cut(s)	1788
ApeKI	GCWGC	3 cut(s)	1696, 1707, 2242
AseI	ATTAAT	1 cut(s)	2499
AsiGI	ACCGGT	1 cut(s)	581
Asp700I	GAANNNNTTC	1 cut(s)	1769
AspLEI	GCGC	2 cut(s)	1340, 2221
AspS9I	GGNCC	3 cut(s)	106, 584, 1304
AsuHPI	GGTGA	6 cut(s)	29, 42, 729, 1049, 1760, 1960
AsuII	TTCGAA	1 cut(s)	1251
AsuNHI	GCTAGC	1 cut(s)	2374
AvaII	GGWCC	2 cut(s)	584, 1304
BaeGI	GKGCMC	1 cut(s)	1792
BamHI	GGATCC	1 cut(s)	1670
BanI	GGYRCC	1 cut(s)	677
BanII	GRGCYC	1 cut(s)	2067
BarI	GAAGNNNNNNTAC	2 cut(s)	1879, 1911
BbsI	GAAGAC	1 cut(s)	1444
Bbv12I	GWGCWC	2 cut(s)	1792, 1943
BbvI	GCAGC	3 cut(s)	1683, 1719, 2254
BccI	CCATC	5 cut(s)	1177, 1328, 1589, 1739, 2284
BceAI	ACGGC	2 cut(s)	519, 2103
BcgI	CGANNNNNNTGC	2 cut(s)	1769, 1803
BciVI	GTATCC	1 cut(s)	487
BcoDI	GTCTC	3 cut(s)	1748, 2016, 2283
BfoI	RGCGCY	2 cut(s)	1341, 2222
BfuAI	ACCTGC	1 cut(s)	2461
BfuI	GTATCC	1 cut(s)	487
BisI	GCNGC	3 cut(s)	1697, 1708, 2243
BlpI	GCTNAGC	1 cut(s)	2091
BlsI	GCNGC	3 cut(s)	1698, 1709, 2244
Bme18I	GGWCC	2 cut(s)	584, 1304
BmgT120I	GGNCC	3 cut(s)	106, 584, 1304
BmiI	GGNNCC	6 cut(s)	370, 442, 679, 1305, 1306, 1672
BmrI	ACTGGG	1 cut(s)	171
BmsI	GCATC	3 cut(s)	1633, 1665, 2026
BmtI	GCTAGC	1 cut(s)	2378
BmuI	ACTGGG	1 cut(s)	171
BpiI	GAAGAC	1 cut(s)	1444
BpmI	CTGGAG	1 cut(s)	1957
Bpu10I	CCTNAGC	4 cut(s)	272, 707, 813, 1904
Bpu1102I	GCTNAGC	1 cut(s)	2091
Bpu14I	TTCGAA	1 cut(s)	1251
BpuEI	CTTGAG	6 cut(s)	415, 452, 470, 1159, 1175, 2418
BsaAI	YACGTR	1 cut(s)	1787
BsaJI	CCNNGG	4 cut(s)	535, 1404, 1509, 1828
BsaWI	WCCGGW	4 cut(s)	581, 1673, 1809, 2338
BsaXI	ACNNNNNCTCC	2 cut(s)	157, 187
Bsc4I	CCNNNNNNNGG	6 cut(s)	218, 386, 746, 818, 1300, 1469
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	6 cut(s)	126, 177, 802, 1294, 1935, 1940
Bse3DI	GCAATG	5 cut(s)	223, 829, 1357, 1375, 1561
BseAI	TCCGGA	1 cut(s)	1673
BseDI	CCNNGG	4 cut(s)	535, 1404, 1509, 1828
BseGI	GGATG	4 cut(s)	789, 2276, 2311, 2444
BseLI	CCNNNNNNNGG	6 cut(s)	218, 386, 746, 818, 1300, 1469
BseMI	GCAATG	5 cut(s)	223, 829, 1357, 1375, 1561
BseMII	CTCAG	3 cut(s)	773, 804, 1895
BseNI	ACTGG	6 cut(s)	126, 177, 802, 1294, 1935, 1940
BseRI	GAGGAG	1 cut(s)	1766
BseSI	GKGCMC	1 cut(s)	1792
BseXI	GCAGC	3 cut(s)	1683, 1719, 2254
BseYI	CCCAGC	1 cut(s)	1128
BshFI	GGCC	2 cut(s)	107, 2413
BshNI	GGYRCC	1 cut(s)	677
BshTI	ACCGGT	1 cut(s)	581
BsiHKAI	GWGCWC	2 cut(s)	1792, 1943
BsiSI	CCGG	5 cut(s)	582, 1674, 1704, 1810, 2339
BslFI	GGGAC	5 cut(s)	431, 762, 1111, 1290, 1295
BslI	CCNNNNNNNGG	6 cut(s)	218, 386, 746, 818, 1300, 1469
BsmAI	GTCTC	3 cut(s)	1748, 2016, 2283
BsmFI	GGGAC	5 cut(s)	431, 762, 1111, 1290, 1295
BsmI	GAATGC	2 cut(s)	285, 1417
BsnI	GGCC	2 cut(s)	107, 2413
Bsp119I	TTCGAA	1 cut(s)	1251
Bsp1286I	GDGCHC	3 cut(s)	1792, 1943, 2067
Bsp13I	TCCGGA	1 cut(s)	1673
Bsp1407I	TGTACA	1 cut(s)	2421
Bsp143I	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
Bsp1720I	GCTNAGC	1 cut(s)	2091
Bsp19I	CCATGG	1 cut(s)	1404
BspACI	CCGC	3 cut(s)	631, 2130, 2280
BspANI	GGCC	2 cut(s)	107, 2413
BspCNI	CTCAG	3 cut(s)	772, 805, 1896
BspEI	TCCGGA	1 cut(s)	1673
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	6 cut(s)	370, 442, 679, 1305, 1306, 1672
BspMI	ACCTGC	1 cut(s)	2461
BspOI	GCTAGC	1 cut(s)	2378
BspPI	GGATC	6 cut(s)	550, 984, 1167, 1665, 1678, 2393
BspT104I	TTCGAA	1 cut(s)	1251
BspT107I	GGYRCC	1 cut(s)	677
BsrDI	GCAATG	5 cut(s)	223, 829, 1357, 1375, 1561
BsrFI	RCCGGY	1 cut(s)	581
BsrGI	TGTACA	1 cut(s)	2421
BsrI	ACTGG	6 cut(s)	126, 177, 802, 1294, 1935, 1940
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	4 cut(s)	535, 1404, 1509, 1828
BssMI	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
BssT1I	CCWWGG	2 cut(s)	1404, 1509
Bst4CI	ACNGT	5 cut(s)	247, 481, 562, 728, 909
BstAPI	GCANNNNNTGC	2 cut(s)	237, 677
BstAUI	TGTACA	1 cut(s)	2421
BstBAI	YACGTR	1 cut(s)	1787
BstBI	TTCGAA	1 cut(s)	1251
BstC8I	GCNNGC	7 cut(s)	19, 2134, 2163, 2217, 2247, 2376, 2386
BstDEI	CTNAG	9 cut(s)	272, 347, 707, 759, 813, 955, 1413, 1904, 2091
BstDSI	CCRYGG	3 cut(s)	535, 1404, 1828
BstEII	GGTNACC	1 cut(s)	2179
BstENI	CCTNNNNNAGG	1 cut(s)	1467
BstF5I	GGATG	4 cut(s)	789, 2276, 2311, 2444
BstH2I	RGCGCY	2 cut(s)	1341, 2222
BstHHI	GCGC	2 cut(s)	1340, 2221
BstKTI	GATC	8 cut(s)	8, 346, 545, 850, 979, 1162, 1673, 2401
BstMAI	GTCTC	3 cut(s)	1748, 2016, 2283
BstMBI	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
BstMWI	GCNNNNNNNGC	4 cut(s)	237, 282, 677, 2375
BstNSI	RCATGY	4 cut(s)	240, 997, 1847, 2388
BstPI	GGTNACC	1 cut(s)	2179
BstSLI	GKGCMC	1 cut(s)	1792
BstV1I	GCAGC	3 cut(s)	1683, 1719, 2254
BstV2I	GAAGAC	1 cut(s)	1444
BstX2I	RGATCY	2 cut(s)	976, 1670
BstXI	CCANNNNNNTGG	1 cut(s)	509
BstYI	RGATCY	2 cut(s)	976, 1670
BsuI	GTATCC	1 cut(s)	487
BsuRI	GGCC	2 cut(s)	107, 2413
BtgI	CCRYGG	3 cut(s)	535, 1404, 1828
BtsCI	GGATG	4 cut(s)	789, 2276, 2311, 2444
BtsI	GCAGTG	2 cut(s)	545, 1725
BtsIMutI	CAGTG	3 cut(s)	545, 905, 1725
BveI	ACCTGC	1 cut(s)	2461
Cac8I	GCNNGC	7 cut(s)	19, 2134, 2163, 2217, 2247, 2376, 2386
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	2 cut(s)	1340, 2221
Cfr10I	RCCGGY	1 cut(s)	581
Cfr13I	GGNCC	3 cut(s)	106, 584, 1304
Csp6I	GTAC	5 cut(s)	294, 482, 563, 1487, 2422
CspAI	ACCGGT	1 cut(s)	581
CviQI	GTAC	5 cut(s)	294, 482, 563, 1487, 2422
DdeI	CTNAG	9 cut(s)	272, 347, 707, 759, 813, 955, 1413, 1904, 2091
DpnI	GATC	8 cut(s)	7, 345, 544, 849, 978, 1161, 1672, 2400
DpnII	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
DraI	TTTAAA	1 cut(s)	2100
EciI	GGCGGA	2 cut(s)	620, 2269
Eco130I	CCWWGG	2 cut(s)	1404, 1509
Eco24I	GRGCYC	1 cut(s)	2067
Eco47I	GGWCC	2 cut(s)	584, 1304
Eco57I	CTGAAG	1 cut(s)	2321
Eco91I	GGTNACC	1 cut(s)	2179
EcoNI	CCTNNNNNAGG	1 cut(s)	1467
EcoO109I	RGGNCCY	2 cut(s)	106, 1304
EcoO65I	GGTNACC	1 cut(s)	2179
EcoRI	GAATTC	2 cut(s)	1589, 1769
EcoT14I	CCWWGG	2 cut(s)	1404, 1509
EcoT22I	ATGCAT	1 cut(s)	1263
EcoT38I	GRGCYC	1 cut(s)	2067
ErhI	CCWWGG	2 cut(s)	1404, 1509
FalI	AAGNNNNNCTT	2 cut(s)	282, 314
FaqI	GGGAC	5 cut(s)	431, 762, 1111, 1290, 1295
FauI	CCCGC	1 cut(s)	2137
FauNDI	CATATG	1 cut(s)	2140
Fnu4HI	GCNGC	3 cut(s)	1697, 1708, 2243
FokI	GGATG	4 cut(s)	776, 2263, 2318, 2431
FriOI	GRGCYC	1 cut(s)	2067
Fsp4HI	GCNGC	3 cut(s)	1697, 1708, 2243
GlaI	GCGC	2 cut(s)	1339, 2220
GluI	GCNGC	3 cut(s)	1697, 1708, 2243
GsaI	CCCAGC	1 cut(s)	1132
GsuI	CTGGAG	1 cut(s)	1957
HaeII	RGCGCY	2 cut(s)	1341, 2222
HaeIII	GGCC	2 cut(s)	107, 2413
HapII	CCGG	5 cut(s)	582, 1674, 1704, 1810, 2339
HhaI	GCGC	2 cut(s)	1340, 2221
Hin6I	GCGC	2 cut(s)	1338, 2219
HinP1I	GCGC	2 cut(s)	1338, 2219
HincII	GTYRAC	3 cut(s)	259, 477, 765
HindII	GTYRAC	3 cut(s)	259, 477, 765
HindIII	AAGCTT	3 cut(s)	598, 1192, 2093
HinfI	GANTC	8 cut(s)	463, 627, 835, 877, 913, 1016, 2108, 2272
HpaI	GTTAAC	1 cut(s)	765
HpaII	CCGG	5 cut(s)	582, 1674, 1704, 1810, 2339
HphI	GGTGA	6 cut(s)	29, 42, 729, 1049, 1760, 1960
Hpy166II	GTNNAC	8 cut(s)	37, 259, 477, 765, 1120, 1684, 1790, 1841
Hpy188I	TCNGA	8 cut(s)	626, 1174, 1206, 1432, 1588, 1764, 2077, 2398
Hpy8I	GTNNAC	8 cut(s)	37, 259, 477, 765, 1120, 1684, 1790, 1841
HpyAV	CCTTC	9 cut(s)	119, 331, 390, 644, 1340, 1349, 1759, 2170, 2296
HpyCH4III	ACNGT	5 cut(s)	247, 481, 562, 728, 909
HpyCH4IV	ACGT	1 cut(s)	1786
HpyF10VI	GCNNNNNNNGC	4 cut(s)	237, 282, 677, 2375
HpyF3I	CTNAG	9 cut(s)	272, 347, 707, 759, 813, 955, 1413, 1904, 2091
HpySE526I	ACGT	1 cut(s)	1786
HspAI	GCGC	2 cut(s)	1338, 2219
KflI	GGGWCCC	1 cut(s)	1304
Kpn2I	TCCGGA	1 cut(s)	1673
KspAI	GTTAAC	1 cut(s)	765
Kzo9I	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
LmnI	GCTCC	2 cut(s)	446, 1938
Lsp1109I	GCAGC	3 cut(s)	1683, 1719, 2254
LweI	GCATC	3 cut(s)	1633, 1665, 2026
MaeII	ACGT	1 cut(s)	1786
MaeIII	GTNAC	4 cut(s)	840, 1037, 1142, 2179
MalI	GATC	8 cut(s)	7, 345, 544, 849, 978, 1161, 1672, 2400
MboI	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
MboII	GAAGA	9 cut(s)	683, 844, 846, 1449, 1536, 1611, 1614, 1625, 1735
MfeI	CAATTG	5 cut(s)	384, 1103, 1503, 2364, 2379
MflI	RGATCY	2 cut(s)	976, 1670
MhlI	GDGCHC	3 cut(s)	1792, 1943, 2067
MlyI	GAGTC	4 cut(s)	636, 1025, 2102, 2266
MmeI	TCCRAC	5 cut(s)	203, 229, 471, 850, 1495
Mph1103I	ATGCAT	1 cut(s)	1263
MroI	TCCGGA	1 cut(s)	1673
MroXI	GAANNNNTTC	1 cut(s)	1769
MseI	TTAA	6 cut(s)	620, 764, 1451, 1776, 2099, 2499
MslI	CAYNNNNRTG	2 cut(s)	742, 1946
MspA1I	CMGCKG	1 cut(s)	2245
MspI	CCGG	5 cut(s)	582, 1674, 1704, 1810, 2339
MunI	CAATTG	5 cut(s)	384, 1103, 1503, 2364, 2379
Mva1269I	GAATGC	2 cut(s)	285, 1417
MwoI	GCNNNNNNNGC	4 cut(s)	237, 282, 677, 2375
NcoI	CCATGG	1 cut(s)	1404
NdeI	CATATG	1 cut(s)	2140
NdeII	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
NheI	GCTAGC	1 cut(s)	2374
NlaIV	GGNNCC	6 cut(s)	370, 442, 679, 1305, 1306, 1672
NmuCI	GTSAC	1 cut(s)	1037
NsiI	ATGCAT	1 cut(s)	1263
NspI	RCATGY	4 cut(s)	240, 997, 1847, 2388
NspV	TTCGAA	1 cut(s)	1251
OliI	CACNNNNGTG	2 cut(s)	742, 1946
PaeI	GCATGC	1 cut(s)	2388
PagI	TCATGA	1 cut(s)	1330
PciI	ACATGT	1 cut(s)	993
PctI	GAATGC	2 cut(s)	285, 1417
PdmI	GAANNNNTTC	1 cut(s)	1769
PfeI	GAWTC	4 cut(s)	463, 835, 877, 913
PflFI	GACNNNGTC	1 cut(s)	753
PflMI	CCANNNNNTGG	1 cut(s)	218
PinAI	ACCGGT	1 cut(s)	581
PkrI	GCNGC	3 cut(s)	1698, 1709, 2244
PleI	GAGTC	4 cut(s)	635, 1024, 2102, 2266
PpsI	GAGTC	4 cut(s)	635, 1024, 2102, 2266
Ppu21I	YACGTR	1 cut(s)	1787
PpuMI	RGGWCCY	1 cut(s)	1304
PscI	ACATGT	1 cut(s)	993
PshBI	ATTAAT	1 cut(s)	2499
Psp5II	RGGWCCY	1 cut(s)	1304
PspEI	GGTNACC	1 cut(s)	2179
PspFI	CCCAGC	1 cut(s)	1128
PspN4I	GGNNCC	6 cut(s)	370, 442, 679, 1305, 1306, 1672
PspPI	GGNCC	3 cut(s)	106, 584, 1304
PspPPI	RGGWCCY	1 cut(s)	1304
PsuI	RGATCY	2 cut(s)	976, 1670
PsyI	GACNNNGTC	1 cut(s)	753
PvuII	CAGCTG	1 cut(s)	2245
RsaI	GTAC	5 cut(s)	295, 483, 564, 1488, 2423
RsaNI	GTAC	5 cut(s)	294, 482, 563, 1487, 2422
RseI	CAYNNNNRTG	2 cut(s)	742, 1946
SaqAI	TTAA	6 cut(s)	620, 764, 1451, 1776, 2099, 2499
SatI	GCNGC	3 cut(s)	1697, 1708, 2243
Sau3AI	GATC	8 cut(s)	5, 343, 542, 847, 976, 1159, 1670, 2398
Sau96I	GGNCC	3 cut(s)	106, 584, 1304
SchI	GAGTC	4 cut(s)	636, 1025, 2102, 2266
SduI	GDGCHC	3 cut(s)	1792, 1943, 2067
SfaNI	GCATC	3 cut(s)	1633, 1665, 2026
SfuI	TTCGAA	1 cut(s)	1251
SinI	GGWCC	2 cut(s)	584, 1304
SmiMI	CAYNNNNRTG	2 cut(s)	742, 1946
SmlI	CTYRAG	6 cut(s)	394, 467, 485, 1138, 1154, 2433
SmoI	CTYRAG	6 cut(s)	394, 467, 485, 1138, 1154, 2433
SphI	GCATGC	1 cut(s)	2388
SsiI	CCGC	3 cut(s)	631, 2130, 2280
SspI	AATATT	3 cut(s)	529, 1210, 1396
StyI	CCWWGG	2 cut(s)	1404, 1509
TaaI	ACNGT	5 cut(s)	247, 481, 562, 728, 909
TaiI	ACGT	1 cut(s)	1789
TaqI	TCGA	8 cut(s)	694, 846, 1251, 1593, 2020, 2114, 2270, 2313
TatI	WGTACW	4 cut(s)	481, 562, 1486, 2421
TfiI	GAWTC	4 cut(s)	463, 835, 877, 913
Tru1I	TTAA	6 cut(s)	620, 764, 1451, 1776, 2099, 2499
Tru9I	TTAA	6 cut(s)	620, 764, 1451, 1776, 2099, 2499
TscAI	CASTG	3 cut(s)	552, 912, 1725
TseFI	GTSAC	1 cut(s)	1037
TseI	GCWGC	3 cut(s)	1696, 1707, 2242
Tsp45I	GTSAC	1 cut(s)	1037
TspDTI	ATGAA	7 cut(s)	36, 372, 1319, 1368, 1626, 2189, 2367
TspGWI	ACGGA	3 cut(s)	410, 433, 1817
TspRI	CASTG	3 cut(s)	552, 912, 1725
Tth111I	GACNNNGTC	1 cut(s)	753
Van91I	CCANNNNNTGG	1 cut(s)	218
VneI	GTGCAC	1 cut(s)	1788
VpaK11BI	GGWCC	2 cut(s)	584, 1304
VspI	ATTAAT	1 cut(s)	2499
XagI	CCTNNNNNAGG	1 cut(s)	1467
XbaI	TCTAGA	1 cut(s)	1795
XceI	RCATGY	4 cut(s)	240, 997, 1847, 2388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	219
XmnI	GAANNNNTTC	1 cut(s)	1769
Zsp2I	ATGCAT	1 cut(s)	1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.