Divergent PAP2 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12685 |
| fragaria_vesca | FvH4_3g13660 |
| malus_domestica | MD05G1241400.v1.1 |
| prunus_persica | Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 |
| pyrus_communis | pycom05g21740 |
| rosa_chinensis | RchiOBHm_Chr5g0022891 |
| rosa_laevigata | RLG00000032680 |
| rosa_multiflora | Rmu_sc0000401.1_g000027 Rmu_sc0010181.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00342800 |
| rosa_rugosa | Rorug03G0240800 Rorug05G0075200 Rorug05G0075300.1 |
| rosa_samantha | Rh3BG325700 Rh4CG087900 Rh5AG161800 Rh5BG160900 Rh5CG175500 Rh5DG162200 Rh6DG193000 |
| rosa_wichuraiana | Rw0G002830 Rw0G020830 Rw1G000420 Rw5G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 107, 186 |
| AclWI | GGATC | 1 cut(s) | 252 |
| AfaI | GTAC | 1 cut(s) | 266 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 228 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AluBI | AGCT | 2 cut(s) | 95, 285 |
| AluI | AGCT | 2 cut(s) | 95, 285 |
| AlwI | GGATC | 1 cut(s) | 252 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| AspS9I | GGNCC | 1 cut(s) | 219 |
| AvaII | GGWCC | 1 cut(s) | 219 |
| BbvI | GCAGC | 1 cut(s) | 104 |
| BccI | CCATC | 1 cut(s) | 79 |
| BfmI | CTRYAG | 1 cut(s) | 77 |
| BisI | GCNGC | 3 cut(s) | 93, 108, 187 |
| BlsI | GCNGC | 3 cut(s) | 94, 109, 188 |
| Bme18I | GGWCC | 1 cut(s) | 219 |
| BmgT120I | GGNCC | 1 cut(s) | 219 |
| BmiI | GGNNCC | 1 cut(s) | 69 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 262, 292 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 228 |
| BseGI | GGATG | 2 cut(s) | 42, 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 228 |
| BseMII | CTCAG | 2 cut(s) | 201, 231 |
| BseXI | GCAGC | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 228 |
| BsmI | GAATGC | 1 cut(s) | 202 |
| Bsp143I | GATC | 1 cut(s) | 244 |
| BspACI | CCGC | 2 cut(s) | 107, 186 |
| BspCNI | CTCAG | 2 cut(s) | 202, 232 |
| BspLI | GGNNCC | 1 cut(s) | 69 |
| BspPI | GGATC | 1 cut(s) | 252 |
| BssMI | GATC | 1 cut(s) | 244 |
| Bst4CI | ACNGT | 1 cut(s) | 123 |
| BstC8I | GCNNGC | 1 cut(s) | 184 |
| BstDEI | CTNAG | 2 cut(s) | 210, 240 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 226 |
| BstF5I | GGATG | 2 cut(s) | 42, 265 |
| BstKTI | GATC | 1 cut(s) | 247 |
| BstMBI | GATC | 1 cut(s) | 244 |
| BstSFI | CTRYAG | 1 cut(s) | 77 |
| BstV1I | GCAGC | 1 cut(s) | 104 |
| BtgZI | GCGATG | 1 cut(s) | 57 |
| BtsCI | GGATG | 2 cut(s) | 42, 265 |
| Cac8I | GCNNGC | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 219 |
| Csp6I | GTAC | 1 cut(s) | 265 |
| CviAII | CATG | 1 cut(s) | 268 |
| CviJI | RGCY | 4 cut(s) | 95, 130, 189, 285 |
| CviKI_1 | RGCY | 4 cut(s) | 95, 130, 189, 285 |
| CviQI | GTAC | 1 cut(s) | 265 |
| DdeI | CTNAG | 2 cut(s) | 210, 240 |
| DpnI | GATC | 1 cut(s) | 246 |
| DpnII | GATC | 1 cut(s) | 244 |
| Eco47I | GGWCC | 1 cut(s) | 219 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 226 |
| EcoO109I | RGGNCCY | 1 cut(s) | 219 |
| FaeI | CATG | 1 cut(s) | 271 |
| FaiI | YATR | 4 cut(s) | 48, 149, 153, 269 |
| FatI | CATG | 1 cut(s) | 267 |
| Fnu4HI | GCNGC | 3 cut(s) | 93, 108, 187 |
| FokI | GGATG | 2 cut(s) | 29, 272 |
| Fsp4HI | GCNGC | 3 cut(s) | 93, 108, 187 |
| GluI | GCNGC | 3 cut(s) | 93, 108, 187 |
| Hin1II | CATG | 1 cut(s) | 271 |
| HinfI | GANTC | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 2 cut(s) | 211, 241 |
| Hpy188III | TCNNGA | 1 cut(s) | 229 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyAV | CCTTC | 1 cut(s) | 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 123 |
| HpyCH4V | TGCA | 2 cut(s) | 92, 256 |
| HpyF3I | CTNAG | 2 cut(s) | 210, 240 |
| Hsp92II | CATG | 1 cut(s) | 271 |
| Kzo9I | GATC | 1 cut(s) | 244 |
| LpnPI | CCDG | 6 cut(s) | 50, 65, 81, 168, 214, 242 |
| Lsp1109I | GCAGC | 1 cut(s) | 104 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MalI | GATC | 1 cut(s) | 246 |
| MboI | GATC | 1 cut(s) | 244 |
| MboII | GAAGA | 1 cut(s) | 53 |
| MluCI | AATT | 1 cut(s) | 144 |
| MnlI | CCTC | 6 cut(s) | 11, 210, 217, 232, 235, 288 |
| MseI | TTAA | 1 cut(s) | 134 |
| MspA1I | CMGCKG | 1 cut(s) | 95 |
| Mva1269I | GAATGC | 1 cut(s) | 202 |
| NdeII | GATC | 1 cut(s) | 244 |
| NlaIII | CATG | 1 cut(s) | 271 |
| NlaIV | GGNNCC | 1 cut(s) | 69 |
| PctI | GAATGC | 1 cut(s) | 202 |
| PfeI | GAWTC | 1 cut(s) | 232 |
| PkrI | GCNGC | 3 cut(s) | 94, 109, 188 |
| PpuMI | RGGWCCY | 1 cut(s) | 219 |
| Psp5II | RGGWCCY | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 1 cut(s) | 69 |
| PspPI | GGNCC | 1 cut(s) | 219 |
| PspPPI | RGGWCCY | 1 cut(s) | 219 |
| PvuII | CAGCTG | 1 cut(s) | 95 |
| RsaI | GTAC | 1 cut(s) | 266 |
| RsaNI | GTAC | 1 cut(s) | 265 |
| SaqAI | TTAA | 1 cut(s) | 134 |
| SatI | GCNGC | 3 cut(s) | 93, 108, 187 |
| Sau3AI | GATC | 1 cut(s) | 244 |
| Sau96I | GGNCC | 1 cut(s) | 219 |
| SetI | ASST | 5 cut(s) | 84, 97, 224, 254, 287 |
| SfcI | CTRYAG | 1 cut(s) | 77 |
| SinI | GGWCC | 1 cut(s) | 219 |
| Sse9I | AATT | 1 cut(s) | 144 |
| SsiI | CCGC | 2 cut(s) | 107, 186 |
| TaaI | ACNGT | 1 cut(s) | 123 |
| TaqI | TCGA | 1 cut(s) | 287 |
| TasI | AATT | 1 cut(s) | 144 |
| TatI | WGTACW | 1 cut(s) | 264 |
| TauI | GCSGC | 2 cut(s) | 110, 189 |
| TfiI | GAWTC | 1 cut(s) | 232 |
| Tru1I | TTAA | 1 cut(s) | 134 |
| Tru9I | TTAA | 1 cut(s) | 134 |
| TseI | GCWGC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 1 cut(s) | 41 |
| VpaK11BI | GGWCC | 1 cut(s) | 219 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 226 |