Divergent PAP2 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12685 |
| fragaria_vesca | FvH4_3g13660 |
| malus_domestica | MD05G1241400.v1.1 |
| prunus_persica | Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 |
| pyrus_communis | pycom05g21740 |
| rosa_chinensis | RchiOBHm_Chr5g0022891 |
| rosa_laevigata | RLG00000032680 |
| rosa_multiflora | Rmu_sc0000401.1_g000027 Rmu_sc0010181.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00342800 |
| rosa_rugosa | Rorug03G0240800 Rorug05G0075200 Rorug05G0075300.1 |
| rosa_samantha | Rh3BG325700 Rh4CG087900 Rh5AG161800 Rh5BG160900 Rh5CG175500 Rh5DG162200 Rh6DG193000 |
| rosa_wichuraiana | Rw0G002830 Rw0G020830 Rw1G000420 Rw5G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 65 |
| AccII | CGCG | 1 cut(s) | 17 |
| AciI | CCGC | 2 cut(s) | 20, 226 |
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AgsI | TTSAA | 3 cut(s) | 136, 185, 220 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 27, 59 |
| AluBI | AGCT | 3 cut(s) | 28, 70, 85 |
| AluI | AGCT | 3 cut(s) | 28, 70, 85 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 1 cut(s) | 246 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| AspLEI | GCGC | 1 cut(s) | 19 |
| BanII | GRGCYC | 1 cut(s) | 30 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BbvI | GCAGC | 1 cut(s) | 94 |
| BcoDI | GTCTC | 1 cut(s) | 246 |
| BisI | GCNGC | 2 cut(s) | 20, 83 |
| BlsI | GCNGC | 2 cut(s) | 21, 84 |
| BmsI | GCATC | 1 cut(s) | 58 |
| Bpu10I | CCTNAGC | 1 cut(s) | 24 |
| Bse3DI | GCAATG | 1 cut(s) | 159 |
| BseMI | GCAATG | 1 cut(s) | 159 |
| BseMII | CTCAG | 1 cut(s) | 15 |
| BseXI | GCAGC | 1 cut(s) | 94 |
| Bsh1236I | CGCG | 1 cut(s) | 17 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsmAI | GTCTC | 1 cut(s) | 246 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| BspACI | CCGC | 2 cut(s) | 20, 226 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspCNI | CTCAG | 1 cut(s) | 16 |
| BspFNI | CGCG | 1 cut(s) | 17 |
| BsrDI | GCAATG | 1 cut(s) | 159 |
| BstC8I | GCNNGC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstFNI | CGCG | 1 cut(s) | 17 |
| BstHHI | GCGC | 1 cut(s) | 19 |
| BstMAI | GTCTC | 1 cut(s) | 246 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 19, 25, 91, 158 |
| BstUI | CGCG | 1 cut(s) | 17 |
| BstV1I | GCAGC | 1 cut(s) | 94 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 15 |
| CfoI | GCGC | 1 cut(s) | 19 |
| CviJI | RGCY | 6 cut(s) | 28, 70, 85, 94, 161, 180 |
| CviKI_1 | RGCY | 6 cut(s) | 28, 70, 85, 94, 161, 180 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| Ecl136II | GAGCTC | 1 cut(s) | 28 |
| Eco24I | GRGCYC | 1 cut(s) | 30 |
| Eco53kI | GAGCTC | 1 cut(s) | 28 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| EcoICRI | GAGCTC | 1 cut(s) | 28 |
| EcoT38I | GRGCYC | 1 cut(s) | 30 |
| FaiI | YATR | 3 cut(s) | 65, 117, 199 |
| Fnu4HI | GCNGC | 2 cut(s) | 20, 83 |
| FriOI | GRGCYC | 1 cut(s) | 30 |
| Fsp4HI | GCNGC | 2 cut(s) | 20, 83 |
| GlaI | GCGC | 1 cut(s) | 18 |
| GluI | GCNGC | 2 cut(s) | 20, 83 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| HhaI | GCGC | 1 cut(s) | 19 |
| Hin6I | GCGC | 1 cut(s) | 17 |
| HinP1I | GCGC | 1 cut(s) | 17 |
| HincII | GTYRAC | 2 cut(s) | 141, 231 |
| HindII | GTYRAC | 2 cut(s) | 141, 231 |
| HpaI | GTTAAC | 1 cut(s) | 231 |
| Hpy166II | GTNNAC | 2 cut(s) | 141, 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 252 |
| Hpy8I | GTNNAC | 2 cut(s) | 141, 231 |
| HpyAV | CCTTC | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 19, 25, 91, 158 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| HspAI | GCGC | 1 cut(s) | 17 |
| KspAI | GTTAAC | 1 cut(s) | 231 |
| LpnPI | CCDG | 3 cut(s) | 36, 56, 134 |
| Lsp1109I | GCAGC | 1 cut(s) | 94 |
| LweI | GCATC | 1 cut(s) | 58 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MluCI | AATT | 1 cut(s) | 108 |
| MseI | TTAA | 1 cut(s) | 230 |
| MvnI | CGCG | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 19, 25, 91, 158 |
| PkrI | GCNGC | 2 cut(s) | 21, 84 |
| PsiI | TTATAA | 1 cut(s) | 65 |
| Psp124BI | GAGCTC | 1 cut(s) | 30 |
| SacI | GAGCTC | 1 cut(s) | 30 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SatI | GCNGC | 2 cut(s) | 20, 83 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SetI | ASST | 3 cut(s) | 30, 72, 87 |
| SfaNI | GCATC | 1 cut(s) | 58 |
| Sse9I | AATT | 1 cut(s) | 108 |
| SsiI | CCGC | 2 cut(s) | 20, 226 |
| SstI | GAGCTC | 1 cut(s) | 30 |
| TasI | AATT | 1 cut(s) | 108 |
| TauI | GCSGC | 1 cut(s) | 22 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TscAI | CASTG | 1 cut(s) | 37 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspRI | CASTG | 1 cut(s) | 37 |