Divergent PAP2 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12685 |
| fragaria_vesca | FvH4_3g13660 |
| malus_domestica | MD05G1241400.v1.1 |
| prunus_persica | Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 |
| pyrus_communis | pycom05g21740 |
| rosa_chinensis | RchiOBHm_Chr5g0022891 |
| rosa_laevigata | RLG00000032680 |
| rosa_multiflora | Rmu_sc0000401.1_g000027 Rmu_sc0010181.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00342800 |
| rosa_rugosa | Rorug03G0240800 Rorug05G0075200 Rorug05G0075300.1 |
| rosa_samantha | Rh3BG325700 Rh4CG087900 Rh5AG161800 Rh5BG160900 Rh5CG175500 Rh5DG162200 Rh6DG193000 |
| rosa_wichuraiana | Rw0G002830 Rw0G020830 Rw1G000420 Rw5G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 232 |
| AciI | CCGC | 1 cut(s) | 99 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 225, 295, 330 |
| AgsI | TTSAA | 2 cut(s) | 91, 164 |
| AluBI | AGCT | 2 cut(s) | 14, 393 |
| AluI | AGCT | 2 cut(s) | 14, 393 |
| AoxI | GGCC | 2 cut(s) | 157, 185 |
| ApeKI | GCWGC | 4 cut(s) | 11, 26, 37, 105 |
| BbvI | GCAGC | 4 cut(s) | 23, 24, 38, 92 |
| BccI | CCATC | 1 cut(s) | 332 |
| BfaI | CTAG | 2 cut(s) | 141, 410 |
| BisI | GCNGC | 4 cut(s) | 12, 27, 38, 106 |
| BlsI | GCNGC | 4 cut(s) | 13, 28, 39, 107 |
| BpuEI | CTTGAG | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 225, 295, 330 |
| Bse3DI | GCAATG | 1 cut(s) | 318 |
| BseGI | GGATG | 3 cut(s) | 207, 215, 324 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 225, 295, 330 |
| BseMI | GCAATG | 1 cut(s) | 318 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseXI | GCAGC | 4 cut(s) | 23, 24, 38, 92 |
| BsgI | GTGCAG | 1 cut(s) | 45 |
| BshFI | GGCC | 2 cut(s) | 159, 187 |
| BslFI | GGGAC | 1 cut(s) | 271 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 225, 295, 330 |
| BsmFI | GGGAC | 1 cut(s) | 271 |
| BsnI | GGCC | 2 cut(s) | 159, 187 |
| BspACI | CCGC | 1 cut(s) | 99 |
| BspANI | GGCC | 2 cut(s) | 159, 187 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BsrDI | GCAATG | 1 cut(s) | 318 |
| Bst4CI | ACNGT | 3 cut(s) | 239, 270, 419 |
| Bst6I | CTCTTC | 1 cut(s) | 338 |
| BstC8I | GCNNGC | 1 cut(s) | 103 |
| BstDEI | CTNAG | 2 cut(s) | 243, 394 |
| BstF5I | GGATG | 3 cut(s) | 207, 215, 324 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 46 |
| BstV1I | GCAGC | 4 cut(s) | 23, 24, 38, 92 |
| BsuRI | GGCC | 2 cut(s) | 159, 187 |
| BtsCI | GGATG | 3 cut(s) | 207, 215, 324 |
| Cac8I | GCNNGC | 1 cut(s) | 103 |
| DdeI | CTNAG | 2 cut(s) | 243, 394 |
| Eam1104I | CTCTTC | 1 cut(s) | 338 |
| EarI | CTCTTC | 1 cut(s) | 338 |
| FaiI | YATR | 4 cut(s) | 72, 225, 330, 433 |
| FaqI | GGGAC | 1 cut(s) | 271 |
| FblI | GTMKAC | 1 cut(s) | 232 |
| Fnu4HI | GCNGC | 4 cut(s) | 12, 27, 38, 106 |
| FokI | GGATG | 3 cut(s) | 202, 214, 311 |
| Fsp4HI | GCNGC | 4 cut(s) | 12, 27, 38, 106 |
| FspBI | CTAG | 2 cut(s) | 141, 410 |
| GluI | GCNGC | 4 cut(s) | 12, 27, 38, 106 |
| HaeIII | GGCC | 2 cut(s) | 159, 187 |
| HindIII | AAGCTT | 1 cut(s) | 391 |
| HinfI | GANTC | 1 cut(s) | 406 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 233 |
| Hpy188III | TCNNGA | 1 cut(s) | 410 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 233 |
| HpyAV | CCTTC | 2 cut(s) | 123, 396 |
| HpyCH4III | ACNGT | 3 cut(s) | 239, 270, 419 |
| HpyCH4V | TGCA | 5 cut(s) | 11, 26, 108, 146, 293 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 46 |
| HpyF3I | CTNAG | 2 cut(s) | 243, 394 |
| LpnPI | CCDG | 2 cut(s) | 87, 296 |
| Lsp1109I | GCAGC | 4 cut(s) | 23, 24, 38, 92 |
| MaeI | CTAG | 2 cut(s) | 141, 410 |
| MaeIII | GTNAC | 1 cut(s) | 264 |
| MboII | GAAGA | 2 cut(s) | 252, 355 |
| MfeI | CAATTG | 2 cut(s) | 30, 353 |
| MluCI | AATT | 4 cut(s) | 30, 63, 192, 353 |
| MmeI | TCCRAC | 1 cut(s) | 252 |
| MnlI | CCTC | 2 cut(s) | 136, 198 |
| MseI | TTAA | 3 cut(s) | 53, 336, 426 |
| MspA1I | CMGCKG | 2 cut(s) | 14, 101 |
| MunI | CAATTG | 2 cut(s) | 30, 353 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 46 |
| PfeI | GAWTC | 1 cut(s) | 406 |
| PkrI | GCNGC | 4 cut(s) | 13, 28, 39, 107 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 223, 255 |
| PvuII | CAGCTG | 1 cut(s) | 14 |
| SaqAI | TTAA | 3 cut(s) | 53, 336, 426 |
| SatI | GCNGC | 4 cut(s) | 12, 27, 38, 106 |
| SetI | ASST | 3 cut(s) | 16, 395, 432 |
| SmlI | CTYRAG | 1 cut(s) | 281 |
| SmoI | CTYRAG | 1 cut(s) | 281 |
| Sse9I | AATT | 4 cut(s) | 30, 63, 192, 353 |
| SsiI | CCGC | 1 cut(s) | 99 |
| SspMI | CTAG | 2 cut(s) | 141, 410 |
| TaaI | ACNGT | 3 cut(s) | 239, 270, 419 |
| TasI | AATT | 4 cut(s) | 30, 63, 192, 353 |
| TfiI | GAWTC | 1 cut(s) | 406 |
| Tru1I | TTAA | 3 cut(s) | 53, 336, 426 |
| Tru9I | TTAA | 3 cut(s) | 53, 336, 426 |
| TseI | GCWGC | 4 cut(s) | 11, 26, 37, 105 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| XbaI | TCTAGA | 1 cut(s) | 409 |
| XmiI | GTMKAC | 1 cut(s) | 232 |
| XspI | CTAG | 2 cut(s) | 141, 410 |