Divergent PAP2 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12685 |
| fragaria_vesca | FvH4_3g13660 |
| malus_domestica | MD05G1241400.v1.1 |
| prunus_persica | Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 Prupe.4G124100_v2.0.a1 |
| pyrus_communis | pycom05g21740 |
| rosa_chinensis | RchiOBHm_Chr5g0022891 |
| rosa_laevigata | RLG00000032680 |
| rosa_multiflora | Rmu_sc0000401.1_g000027 Rmu_sc0010181.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00342800 |
| rosa_rugosa | Rorug03G0240800 Rorug05G0075200 Rorug05G0075300.1 |
| rosa_samantha | Rh3BG325700 Rh4CG087900 Rh5AG161800 Rh5BG160900 Rh5CG175500 Rh5DG162200 Rh6DG193000 |
| rosa_wichuraiana | Rw0G002830 Rw0G020830 Rw1G000420 Rw5G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 182 |
| AcuI | CTGAAG | 1 cut(s) | 245 |
| AgsI | TTSAA | 3 cut(s) | 130, 148, 250 |
| AluBI | AGCT | 5 cut(s) | 11, 25, 124, 170, 196 |
| AluI | AGCT | 5 cut(s) | 11, 25, 124, 170, 196 |
| ApeKI | GCWGC | 2 cut(s) | 167, 193 |
| BbvI | GCAGC | 2 cut(s) | 179, 205 |
| BccI | CCATC | 1 cut(s) | 111 |
| BisI | GCNGC | 2 cut(s) | 168, 194 |
| BlsI | GCNGC | 2 cut(s) | 169, 195 |
| BmiI | GGNNCC | 1 cut(s) | 267 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 72 |
| BseMII | CTCAG | 1 cut(s) | 12 |
| BseXI | GCAGC | 2 cut(s) | 179, 205 |
| BsmI | GAATGC | 1 cut(s) | 273 |
| Bsp143I | GATC | 2 cut(s) | 3, 134 |
| BspACI | CCGC | 1 cut(s) | 182 |
| BspCNI | CTCAG | 1 cut(s) | 13 |
| BspLI | GGNNCC | 1 cut(s) | 267 |
| BssMI | GATC | 2 cut(s) | 3, 134 |
| Bst6I | CTCTTC | 1 cut(s) | 125 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstF5I | GGATG | 1 cut(s) | 72 |
| BstKTI | GATC | 2 cut(s) | 6, 137 |
| BstMBI | GATC | 2 cut(s) | 3, 134 |
| BstV1I | GCAGC | 2 cut(s) | 179, 205 |
| BtsCI | GGATG | 1 cut(s) | 72 |
| CviAII | CATG | 2 cut(s) | 98, 107 |
| CviJI | RGCY | 7 cut(s) | 11, 25, 65, 124, 170, 196, 266 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 25, 65, 124, 170, 196, 266 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| DpnI | GATC | 2 cut(s) | 5, 136 |
| DpnII | GATC | 2 cut(s) | 3, 134 |
| Eam1104I | CTCTTC | 1 cut(s) | 125 |
| EarI | CTCTTC | 1 cut(s) | 125 |
| Eco57I | CTGAAG | 1 cut(s) | 245 |
| FaeI | CATG | 2 cut(s) | 101, 110 |
| FaiI | YATR | 4 cut(s) | 81, 99, 108, 231 |
| FatI | CATG | 2 cut(s) | 97, 106 |
| Fnu4HI | GCNGC | 2 cut(s) | 168, 194 |
| FokI | GGATG | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 2 cut(s) | 168, 194 |
| GluI | GCNGC | 2 cut(s) | 168, 194 |
| Hin1II | CATG | 2 cut(s) | 101, 110 |
| HincII | GTYRAC | 1 cut(s) | 255 |
| HindII | GTYRAC | 1 cut(s) | 255 |
| HindIII | AAGCTT | 1 cut(s) | 122 |
| Hpy166II | GTNNAC | 1 cut(s) | 255 |
| Hpy8I | GTNNAC | 1 cut(s) | 255 |
| HpyAV | CCTTC | 3 cut(s) | 148, 219, 269 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 167 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| Hsp92II | CATG | 2 cut(s) | 101, 110 |
| Kzo9I | GATC | 2 cut(s) | 3, 134 |
| LmnI | GCTCC | 1 cut(s) | 271 |
| LpnPI | CCDG | 3 cut(s) | 79, 156, 248 |
| Lsp1109I | GCAGC | 2 cut(s) | 179, 205 |
| LweI | GCATC | 1 cut(s) | 81 |
| MaeIII | GTNAC | 1 cut(s) | 44 |
| MalI | GATC | 2 cut(s) | 5, 136 |
| MboI | GATC | 2 cut(s) | 3, 134 |
| MboII | GAAGA | 1 cut(s) | 142 |
| MluCI | AATT | 3 cut(s) | 117, 186, 222 |
| MmeI | TCCRAC | 1 cut(s) | 225 |
| MnlI | CCTC | 2 cut(s) | 62, 87 |
| MseI | TTAA | 1 cut(s) | 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 36 |
| MspA1I | CMGCKG | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 1 cut(s) | 273 |
| NdeII | GATC | 2 cut(s) | 3, 134 |
| NlaIII | CATG | 2 cut(s) | 101, 110 |
| NlaIV | GGNNCC | 1 cut(s) | 267 |
| PctI | GAATGC | 1 cut(s) | 273 |
| PkrI | GCNGC | 2 cut(s) | 169, 195 |
| PspN4I | GGNNCC | 1 cut(s) | 267 |
| PvuII | CAGCTG | 1 cut(s) | 170 |
| RseI | CAYNNNNRTG | 1 cut(s) | 36 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| SatI | GCNGC | 2 cut(s) | 168, 194 |
| Sau3AI | GATC | 2 cut(s) | 3, 134 |
| SetI | ASST | 6 cut(s) | 13, 27, 126, 159, 172, 198 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SgeI | CNNG | 7 cut(s) | 74, 78, 110, 119, 183, 262, 275 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 36 |
| Sse9I | AATT | 3 cut(s) | 117, 186, 222 |
| SsiI | CCGC | 1 cut(s) | 182 |
| TaqI | TCGA | 1 cut(s) | 6 |
| TasI | AATT | 3 cut(s) | 117, 186, 222 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TseI | GCWGC | 2 cut(s) | 167, 193 |