No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06868 AT5G49100 |
| fragaria_vesca | FvH4_4g18460 |
| malus_domestica | MD13G1166900.v1.1 MD16G1166700.v1.1 |
| prunus_persica | Prupe.1G133400_v2.0.a1 |
| pyrus_communis | pycom13g14260 pycom16g14070 |
| rosa_chinensis | RchiOBHm_Chr4g0422951 |
| rosa_laevigata | RLG00000007594 |
| rosa_multiflora | Rmu_co8111434.1_g000001 Rmu_co8370611.1_g000001 Rmu_sc0000744.1_g000157 Rmu_sc0000744.1_g000158 Rmu_sc0000830.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00365070 |
| rosa_rugosa | Rorug04G0182600 |
| rosa_samantha | Rh4AG242800 Rh4BG247200 Rh4CG256700 Rh4DG242000 |
| rosa_wichuraiana | Rw4G020910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 167, 878 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 427 |
| AccBSI | CCGCTC | 3 cut(s) | 200, 715, 781 |
| AccI | GTMKAC | 1 cut(s) | 398 |
| AccII | CGCG | 3 cut(s) | 366, 368, 647 |
| AclWI | GGATC | 4 cut(s) | 55, 305, 723, 791 |
| AcoI | YGGCCR | 3 cut(s) | 312, 369, 573 |
| AcuI | CTGAAG | 4 cut(s) | 430, 511, 681, 1122 |
| AcyI | GRCGYC | 2 cut(s) | 168, 879 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 416, 427, 960, 1004 |
| AgsI | TTSAA | 2 cut(s) | 385, 662 |
| AjnI | CCWGG | 3 cut(s) | 39, 293, 314 |
| AluBI | AGCT | 8 cut(s) | 75, 84, 525, 596, 638, 759, 1047, 1079 |
| AluI | AGCT | 8 cut(s) | 75, 84, 525, 596, 638, 759, 1047, 1079 |
| Alw26I | GTCTC | 6 cut(s) | 67, 93, 525, 727, 831, 970 |
| AlwI | GGATC | 4 cut(s) | 55, 305, 723, 791 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 596 |
| Ama87I | CYCGRG | 1 cut(s) | 1013 |
| AoxI | GGCC | 7 cut(s) | 291, 312, 369, 418, 573, 1016, 1056 |
| ApeKI | GCWGC | 5 cut(s) | 434, 593, 744, 750, 1044 |
| AspLEI | GCGC | 4 cut(s) | 55, 170, 368, 881 |
| AspS9I | GGNCC | 7 cut(s) | 235, 291, 418, 474, 1010, 1016, 1056 |
| AsuC2I | CCSGG | 3 cut(s) | 286, 1014, 1015 |
| AsuHPI | GGTGA | 2 cut(s) | 343, 665 |
| AsuII | TTCGAA | 1 cut(s) | 1097 |
| AsuNHI | GCTAGC | 1 cut(s) | 1064 |
| AvaI | CYCGRG | 1 cut(s) | 1013 |
| AvaII | GGWCC | 3 cut(s) | 235, 474, 1010 |
| BalI | TGGCCA | 1 cut(s) | 314 |
| BanI | GGYRCC | 2 cut(s) | 167, 878 |
| BanII | GRGCYC | 1 cut(s) | 620 |
| BbsI | GAAGAC | 3 cut(s) | 669, 942, 987 |
| BbvCI | CCTCAGC | 1 cut(s) | 973 |
| BbvI | GCAGC | 5 cut(s) | 421, 605, 731, 762, 1056 |
| BccI | CCATC | 1 cut(s) | 29 |
| BceAI | ACGGC | 2 cut(s) | 268, 892 |
| BciT130I | CCWGG | 3 cut(s) | 41, 295, 316 |
| BcnI | CCSGG | 3 cut(s) | 286, 1014, 1015 |
| BcoDI | GTCTC | 6 cut(s) | 67, 93, 525, 727, 831, 970 |
| BfaI | CTAG | 2 cut(s) | 1022, 1065 |
| BfoI | RGCGCY | 2 cut(s) | 171, 882 |
| BglII | AGATCT | 2 cut(s) | 152, 734 |
| BisI | GCNGC | 9 cut(s) | 198, 364, 369, 435, 594, 745, 748, 751, 1045 |
| BlsI | GCNGC | 9 cut(s) | 199, 365, 370, 436, 595, 746, 749, 752, 1046 |
| Bme1390I | CCNGG | 6 cut(s) | 41, 286, 295, 316, 1014, 1015 |
| Bme18I | GGWCC | 3 cut(s) | 235, 474, 1010 |
| BmeT110I | CYCGRG | 1 cut(s) | 1013 |
| BmgT120I | GGNCC | 7 cut(s) | 235, 291, 418, 474, 1010, 1016, 1056 |
| BmiI | GGNNCC | 4 cut(s) | 169, 419, 880, 1012 |
| BmrFI | CCNGG | 6 cut(s) | 41, 286, 295, 316, 1014, 1015 |
| BmsI | GCATC | 2 cut(s) | 421, 575 |
| BmtI | GCTAGC | 1 cut(s) | 1068 |
| BoxI | GACNNNNGTC | 1 cut(s) | 672 |
| BpiI | GAAGAC | 3 cut(s) | 669, 942, 987 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 770, 802 |
| BpmI | CTGGAG | 1 cut(s) | 709 |
| Bpu10I | CCTNAGC | 1 cut(s) | 973 |
| Bpu14I | TTCGAA | 1 cut(s) | 1097 |
| BpuMI | CCSGG | 3 cut(s) | 286, 1014, 1015 |
| BsaBI | GATNNNNATC | 1 cut(s) | 733 |
| BsaHI | GRCGYC | 2 cut(s) | 168, 879 |
| BsaI | GGTCTC | 2 cut(s) | 727, 970 |
| BsaJI | CCNNGG | 5 cut(s) | 39, 410, 645, 1013, 1027 |
| BsaWI | WCCGGW | 1 cut(s) | 1004 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 416, 427, 960, 1004 |
| Bse118I | RCCGGY | 1 cut(s) | 179 |
| Bse1I | ACTGG | 2 cut(s) | 169, 796 |
| Bse8I | GATNNNNATC | 1 cut(s) | 733 |
| BseBI | CCWGG | 3 cut(s) | 41, 295, 316 |
| BseDI | CCNNGG | 5 cut(s) | 39, 410, 645, 1013, 1027 |
| BseGI | GGATG | 3 cut(s) | 21, 436, 938 |
| BseJI | GATNNNNATC | 1 cut(s) | 733 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 416, 427, 960, 1004 |
| BseMII | CTCAG | 3 cut(s) | 617, 826, 987 |
| BseNI | ACTGG | 2 cut(s) | 169, 796 |
| BseRI | GAGGAG | 6 cut(s) | 126, 403, 544, 547, 958, 961 |
| BseX3I | CGGCCG | 1 cut(s) | 369 |
| BseXI | GCAGC | 5 cut(s) | 421, 605, 731, 762, 1056 |
| BseYI | CCCAGC | 1 cut(s) | 1047 |
| BsgI | GTGCAG | 2 cut(s) | 33, 790 |
| Bsh1236I | CGCG | 3 cut(s) | 366, 368, 647 |
| Bsh1285I | CGRYCG | 1 cut(s) | 372 |
| BshFI | GGCC | 7 cut(s) | 293, 314, 371, 420, 575, 1018, 1058 |
| BshNI | GGYRCC | 2 cut(s) | 167, 878 |
| BsiEI | CGRYCG | 1 cut(s) | 372 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1013 |
| BsiSI | CCGG | 6 cut(s) | 180, 286, 754, 765, 1005, 1014 |
| BslFI | GGGAC | 4 cut(s) | 225, 660, 996, 1127 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 416, 427, 960, 1004 |
| BsmAI | GTCTC | 6 cut(s) | 67, 93, 525, 727, 831, 970 |
| BsmBI | CGTCTC | 1 cut(s) | 93 |
| BsmFI | GGGAC | 4 cut(s) | 225, 660, 996, 1127 |
| BsmI | GAATGC | 2 cut(s) | 11, 1138 |
| BsnI | GGCC | 7 cut(s) | 293, 314, 371, 420, 575, 1018, 1058 |
| Bso31I | GGTCTC | 2 cut(s) | 727, 970 |
| BsoBI | CYCGRG | 1 cut(s) | 1013 |
| Bsp119I | TTCGAA | 1 cut(s) | 1097 |
| Bsp1286I | GDGCHC | 1 cut(s) | 620 |
| Bsp143I | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| BspANI | GGCC | 7 cut(s) | 293, 314, 371, 420, 575, 1018, 1058 |
| BspCNI | CTCAG | 3 cut(s) | 618, 825, 986 |
| BspFNI | CGCG | 3 cut(s) | 366, 368, 647 |
| BspHI | TCATGA | 1 cut(s) | 918 |
| BspLI | GGNNCC | 4 cut(s) | 169, 419, 880, 1012 |
| BspOI | GCTAGC | 1 cut(s) | 1068 |
| BspPI | GGATC | 4 cut(s) | 55, 305, 723, 791 |
| BspQI | GCTCTTC | 1 cut(s) | 625 |
| BspT104I | TTCGAA | 1 cut(s) | 1097 |
| BspT107I | GGYRCC | 2 cut(s) | 167, 878 |
| BspTNI | GGTCTC | 2 cut(s) | 727, 970 |
| BsrBI | CCGCTC | 3 cut(s) | 200, 715, 781 |
| BsrFI | RCCGGY | 1 cut(s) | 179 |
| BsrI | ACTGG | 2 cut(s) | 169, 796 |
| BssAI | RCCGGY | 1 cut(s) | 179 |
| BssECI | CCNNGG | 5 cut(s) | 39, 410, 645, 1013, 1027 |
| BssMI | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| BssNI | GRCGYC | 2 cut(s) | 168, 879 |
| Bst2UI | CCWGG | 3 cut(s) | 41, 295, 316 |
| Bst4CI | ACNGT | 1 cut(s) | 580 |
| Bst6I | CTCTTC | 7 cut(s) | 96, 132, 625, 709, 859, 949, 1103 |
| BstACI | GRCGYC | 2 cut(s) | 168, 879 |
| BstBI | TTCGAA | 1 cut(s) | 1097 |
| BstC8I | GCNNGC | 5 cut(s) | 82, 181, 291, 842, 1066 |
| BstDEI | CTNAG | 3 cut(s) | 626, 812, 973 |
| BstDSI | CCRYGG | 2 cut(s) | 645, 1027 |
| BstF5I | GGATG | 3 cut(s) | 21, 436, 938 |
| BstFNI | CGCG | 3 cut(s) | 366, 368, 647 |
| BstH2I | RGCGCY | 2 cut(s) | 171, 882 |
| BstHHI | GCGC | 4 cut(s) | 55, 170, 368, 881 |
| BstKTI | GATC | 6 cut(s) | 50, 155, 300, 731, 737, 786 |
| BstMAI | GTCTC | 6 cut(s) | 67, 93, 525, 727, 831, 970 |
| BstMBI | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| BstMCI | CGRYCG | 1 cut(s) | 372 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 81, 176, 189, 572, 644, 750, 756, 765, 1044 |
| BstNI | CCWGG | 3 cut(s) | 41, 295, 316 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 672 |
| BstSCI | CCNGG | 6 cut(s) | 39, 284, 293, 314, 1012, 1013 |
| BstUI | CGCG | 3 cut(s) | 366, 368, 647 |
| BstV1I | GCAGC | 5 cut(s) | 421, 605, 731, 762, 1056 |
| BstV2I | GAAGAC | 3 cut(s) | 669, 942, 987 |
| BstX2I | RGATCY | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| BstYI | RGATCY | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| BstZI | CGGCCG | 1 cut(s) | 369 |
| BsuRI | GGCC | 7 cut(s) | 293, 314, 371, 420, 575, 1018, 1058 |
| BtgI | CCRYGG | 2 cut(s) | 645, 1027 |
| BtsCI | GGATG | 3 cut(s) | 21, 436, 938 |
| BtsI | GCAGTG | 3 cut(s) | 16, 21, 690 |
| BtsIMutI | CAGTG | 5 cut(s) | 16, 21, 162, 690, 916 |
| Cac8I | GCNNGC | 5 cut(s) | 82, 181, 291, 842, 1066 |
| CaiI | CAGNNNCTG | 1 cut(s) | 596 |
| CciI | TCATGA | 1 cut(s) | 918 |
| CfoI | GCGC | 4 cut(s) | 55, 170, 368, 881 |
| Cfr10I | RCCGGY | 1 cut(s) | 179 |
| Cfr13I | GGNCC | 7 cut(s) | 235, 291, 418, 474, 1010, 1016, 1056 |
| Cfr42I | CCGCGG | 1 cut(s) | 648 |
| Cfr9I | CCCGGG | 1 cut(s) | 1013 |
| CpoI | CGGWCCG | 1 cut(s) | 235 |
| CseI | GACGC | 1 cut(s) | 181 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 24, 59 |
| CspI | CGGWCCG | 1 cut(s) | 235 |
| CviAII | CATG | 4 cut(s) | 427, 919, 985, 1072 |
| DdeI | CTNAG | 3 cut(s) | 626, 812, 973 |
| DinI | GGCGCC | 2 cut(s) | 169, 880 |
| DpnI | GATC | 6 cut(s) | 49, 154, 299, 730, 736, 785 |
| DpnII | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| EaeI | YGGCCR | 3 cut(s) | 312, 369, 573 |
| EagI | CGGCCG | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 7 cut(s) | 96, 132, 625, 709, 859, 949, 1103 |
| EarI | CTCTTC | 7 cut(s) | 96, 132, 625, 709, 859, 949, 1103 |
| EciI | GGCGGA | 1 cut(s) | 111 |
| EclXI | CGGCCG | 1 cut(s) | 369 |
| Eco24I | GRGCYC | 1 cut(s) | 620 |
| Eco31I | GGTCTC | 2 cut(s) | 727, 970 |
| Eco47I | GGWCC | 3 cut(s) | 235, 474, 1010 |
| Eco52I | CGGCCG | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 4 cut(s) | 430, 511, 681, 1122 |
| Eco88I | CYCGRG | 1 cut(s) | 1013 |
| EcoRII | CCWGG | 3 cut(s) | 39, 293, 314 |
| EcoT38I | GRGCYC | 1 cut(s) | 620 |
| EgeI | GGCGCC | 2 cut(s) | 169, 880 |
| EheI | GGCGCC | 2 cut(s) | 169, 880 |
| Esp3I | CGTCTC | 1 cut(s) | 93 |
| FaeI | CATG | 4 cut(s) | 430, 922, 988, 1075 |
| FaiI | YATR | 5 cut(s) | 377, 428, 920, 986, 1073 |
| FaqI | GGGAC | 4 cut(s) | 225, 660, 996, 1127 |
| FatI | CATG | 4 cut(s) | 426, 918, 984, 1071 |
| FauI | CCCGC | 1 cut(s) | 282 |
| FblI | GTMKAC | 1 cut(s) | 398 |
| Fnu4HI | GCNGC | 9 cut(s) | 198, 364, 369, 435, 594, 745, 748, 751, 1045 |
| FokI | GGATG | 3 cut(s) | 8, 443, 925 |
| FriOI | GRGCYC | 1 cut(s) | 620 |
| Fsp4HI | GCNGC | 9 cut(s) | 198, 364, 369, 435, 594, 745, 748, 751, 1045 |
| FspBI | CTAG | 2 cut(s) | 1022, 1065 |
| GlaI | GCGC | 4 cut(s) | 54, 169, 367, 880 |
| GluI | GCNGC | 9 cut(s) | 198, 364, 369, 435, 594, 745, 748, 751, 1045 |
| GsaI | CCCAGC | 1 cut(s) | 1051 |
| GsuI | CTGGAG | 1 cut(s) | 709 |
| HaeII | RGCGCY | 2 cut(s) | 171, 882 |
| HaeIII | GGCC | 7 cut(s) | 293, 314, 371, 420, 575, 1018, 1058 |
| HapII | CCGG | 6 cut(s) | 180, 286, 754, 765, 1005, 1014 |
| HgaI | GACGC | 1 cut(s) | 181 |
| HhaI | GCGC | 4 cut(s) | 55, 170, 368, 881 |
| Hin1I | GRCGYC | 2 cut(s) | 168, 879 |
| Hin1II | CATG | 4 cut(s) | 430, 922, 988, 1075 |
| Hin6I | GCGC | 4 cut(s) | 53, 168, 366, 879 |
| HinP1I | GCGC | 4 cut(s) | 53, 168, 366, 879 |
| HinfI | GANTC | 2 cut(s) | 257, 824 |
| HpaII | CCGG | 6 cut(s) | 180, 286, 754, 765, 1005, 1014 |
| HphI | GGTGA | 2 cut(s) | 343, 665 |
| Hpy166II | GTNNAC | 2 cut(s) | 399, 1027 |
| Hpy188I | TCNGA | 8 cut(s) | 157, 352, 360, 414, 530, 627, 815, 1141 |
| Hpy188III | TCNNGA | 6 cut(s) | 269, 385, 726, 732, 787, 919 |
| Hpy8I | GTNNAC | 2 cut(s) | 399, 1027 |
| Hpy99I | CGWCG | 2 cut(s) | 197, 275 |
| HpyCH4III | ACNGT | 1 cut(s) | 580 |
| HpyCH4IV | ACGT | 1 cut(s) | 657 |
| HpyCH4V | TGCA | 5 cut(s) | 9, 14, 566, 807, 1169 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 81, 176, 189, 572, 644, 750, 756, 765, 1044 |
| HpyF3I | CTNAG | 3 cut(s) | 626, 812, 973 |
| HpySE526I | ACGT | 1 cut(s) | 657 |
| Hsp92I | GRCGYC | 2 cut(s) | 168, 879 |
| Hsp92II | CATG | 4 cut(s) | 430, 922, 988, 1075 |
| HspAI | GCGC | 4 cut(s) | 53, 168, 366, 879 |
| KasI | GGCGCC | 2 cut(s) | 167, 878 |
| KroI | GCCGGC | 1 cut(s) | 179 |
| KroNI | GCCGGC | 1 cut(s) | 181 |
| KspI | CCGCGG | 1 cut(s) | 648 |
| Kzo9I | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| LguI | GCTCTTC | 1 cut(s) | 625 |
| LmnI | GCTCC | 4 cut(s) | 205, 390, 756, 1041 |
| Lsp1109I | GCAGC | 5 cut(s) | 421, 605, 731, 762, 1056 |
| LweI | GCATC | 2 cut(s) | 421, 575 |
| MaeI | CTAG | 2 cut(s) | 1022, 1065 |
| MaeII | ACGT | 1 cut(s) | 657 |
| MaeIII | GTNAC | 5 cut(s) | 16, 115, 331, 580, 653 |
| MalI | GATC | 6 cut(s) | 49, 154, 299, 730, 736, 785 |
| MbiI | CCGCTC | 3 cut(s) | 200, 715, 781 |
| MboI | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| MflI | RGATCY | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| MhlI | GDGCHC | 1 cut(s) | 620 |
| MlsI | TGGCCA | 1 cut(s) | 314 |
| MluCI | AATT | 1 cut(s) | 1170 |
| MluNI | TGGCCA | 1 cut(s) | 314 |
| Mly113I | GGCGCC | 2 cut(s) | 168, 879 |
| MlyI | GAGTC | 2 cut(s) | 266, 833 |
| Mox20I | TGGCCA | 1 cut(s) | 314 |
| MroNI | GCCGGC | 1 cut(s) | 179 |
| MscI | TGGCCA | 1 cut(s) | 314 |
| Msp20I | TGGCCA | 1 cut(s) | 314 |
| MspA1I | CMGCKG | 3 cut(s) | 596, 647, 1047 |
| MspI | CCGG | 6 cut(s) | 180, 286, 754, 765, 1005, 1014 |
| MspR9I | CCNGG | 6 cut(s) | 41, 286, 295, 316, 1014, 1015 |
| Mva1269I | GAATGC | 2 cut(s) | 11, 1138 |
| MvaI | CCWGG | 3 cut(s) | 41, 295, 316 |
| MvnI | CGCG | 3 cut(s) | 366, 368, 647 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 81, 176, 189, 572, 644, 750, 756, 765, 1044 |
| NaeI | GCCGGC | 1 cut(s) | 181 |
| NarI | GGCGCC | 2 cut(s) | 168, 879 |
| NciI | CCSGG | 3 cut(s) | 286, 1014, 1015 |
| NdeII | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| NgoMIV | GCCGGC | 1 cut(s) | 179 |
| NheI | GCTAGC | 1 cut(s) | 1064 |
| NlaIII | CATG | 4 cut(s) | 430, 922, 988, 1075 |
| NlaIV | GGNNCC | 4 cut(s) | 169, 419, 880, 1012 |
| NmeAIII | GCCGAG | 2 cut(s) | 56, 907 |
| NmuCI | GTSAC | 3 cut(s) | 16, 331, 653 |
| NspV | TTCGAA | 1 cut(s) | 1097 |
| PagI | TCATGA | 1 cut(s) | 918 |
| PciSI | GCTCTTC | 1 cut(s) | 625 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 83, 663, 953 |
| PctI | GAATGC | 2 cut(s) | 11, 1138 |
| PdiI | GCCGGC | 1 cut(s) | 181 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 427 |
| PkrI | GCNGC | 9 cut(s) | 199, 365, 370, 436, 595, 746, 749, 752, 1046 |
| PleI | GAGTC | 2 cut(s) | 265, 832 |
| PluTI | GGCGCC | 2 cut(s) | 171, 882 |
| PpsI | GAGTC | 2 cut(s) | 265, 832 |
| PshAI | GACNNNNGTC | 1 cut(s) | 672 |
| Psp6I | CCWGG | 3 cut(s) | 39, 293, 314 |
| PspFI | CCCAGC | 1 cut(s) | 1047 |
| PspGI | CCWGG | 3 cut(s) | 39, 293, 314 |
| PspN4I | GGNNCC | 4 cut(s) | 169, 419, 880, 1012 |
| PspPI | GGNCC | 7 cut(s) | 235, 291, 418, 474, 1010, 1016, 1056 |
| PstNI | CAGNNNCTG | 1 cut(s) | 596 |
| PsuI | RGATCY | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| PvuII | CAGCTG | 2 cut(s) | 596, 1047 |
| Rsr2I | CGGWCCG | 1 cut(s) | 235 |
| RsrII | CGGWCCG | 1 cut(s) | 235 |
| SacII | CCGCGG | 1 cut(s) | 648 |
| SapI | GCTCTTC | 1 cut(s) | 625 |
| SatI | GCNGC | 9 cut(s) | 198, 364, 369, 435, 594, 745, 748, 751, 1045 |
| Sau3AI | GATC | 6 cut(s) | 47, 152, 297, 728, 734, 783 |
| Sau96I | GGNCC | 7 cut(s) | 235, 291, 418, 474, 1010, 1016, 1056 |
| SchI | GAGTC | 2 cut(s) | 266, 833 |
| ScrFI | CCNGG | 6 cut(s) | 41, 286, 295, 316, 1014, 1015 |
| SduI | GDGCHC | 1 cut(s) | 620 |
| SfaNI | GCATC | 2 cut(s) | 421, 575 |
| SfoI | GGCGCC | 2 cut(s) | 169, 880 |
| Sfr303I | CCGCGG | 1 cut(s) | 648 |
| SfuI | TTCGAA | 1 cut(s) | 1097 |
| SgrBI | CCGCGG | 1 cut(s) | 648 |
| SinI | GGWCC | 3 cut(s) | 235, 474, 1010 |
| SmaI | CCCGGG | 1 cut(s) | 1015 |
| Sse9I | AATT | 1 cut(s) | 1170 |
| SspDI | GGCGCC | 2 cut(s) | 167, 878 |
| SspMI | CTAG | 2 cut(s) | 1022, 1065 |
| StyD4I | CCNGG | 6 cut(s) | 39, 284, 293, 314, 1012, 1013 |
| TaaI | ACNGT | 1 cut(s) | 580 |
| TaiI | ACGT | 1 cut(s) | 660 |
| TaqI | TCGA | 6 cut(s) | 513, 711, 777, 788, 822, 1097 |
| TaqII | GACCGA | 1 cut(s) | 223 |
| TasI | AATT | 1 cut(s) | 1170 |
| TauI | GCSGC | 4 cut(s) | 200, 366, 371, 750 |
| TscAI | CASTG | 5 cut(s) | 16, 21, 169, 697, 916 |
| TseFI | GTSAC | 3 cut(s) | 16, 331, 653 |
| TseI | GCWGC | 5 cut(s) | 434, 593, 744, 750, 1044 |
| Tsp45I | GTSAC | 3 cut(s) | 16, 331, 653 |
| TspDTI | ATGAA | 7 cut(s) | 254, 415, 846, 907, 918, 927, 1001 |
| TspGWI | ACGGA | 1 cut(s) | 227 |
| TspMI | CCCGGG | 1 cut(s) | 1013 |
| TspRI | CASTG | 5 cut(s) | 16, 21, 169, 697, 916 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 427 |
| VpaK11BI | GGWCC | 3 cut(s) | 235, 474, 1010 |
| XmaI | CCCGGG | 1 cut(s) | 1013 |
| XmiI | GTMKAC | 1 cut(s) | 398 |
| XspI | CTAG | 2 cut(s) | 1022, 1065 |