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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06868 AT5G49100 |
| fragaria_vesca | FvH4_4g18460 |
| malus_domestica | MD13G1166900.v1.1 MD16G1166700.v1.1 |
| prunus_persica | Prupe.1G133400_v2.0.a1 |
| pyrus_communis | pycom13g14260 pycom16g14070 |
| rosa_chinensis | RchiOBHm_Chr4g0422951 |
| rosa_laevigata | RLG00000007594 |
| rosa_multiflora | Rmu_co8111434.1_g000001 Rmu_co8370611.1_g000001 Rmu_sc0000744.1_g000157 Rmu_sc0000744.1_g000158 Rmu_sc0000830.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00365070 |
| rosa_rugosa | Rorug04G0182600 |
| rosa_samantha | Rh4AG242800 Rh4BG247200 Rh4CG256700 Rh4DG242000 |
| rosa_wichuraiana | Rw4G020910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 266, 977 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 526 |
| AccBSI | CCGCTC | 2 cut(s) | 814, 880 |
| AccI | GTMKAC | 1 cut(s) | 497 |
| AccII | CGCG | 2 cut(s) | 465, 746 |
| AclWI | GGATC | 4 cut(s) | 93, 155, 822, 890 |
| AcoI | YGGCCR | 1 cut(s) | 672 |
| AcuI | CTGAAG | 3 cut(s) | 610, 780, 1221 |
| AcyI | GRCGYC | 2 cut(s) | 267, 978 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 515, 526, 1059, 1103 |
| AgsI | TTSAA | 2 cut(s) | 484, 761 |
| AjnI | CCWGG | 3 cut(s) | 139, 392, 413 |
| AluBI | AGCT | 7 cut(s) | 175, 184, 624, 695, 858, 1146, 1178 |
| AluI | AGCT | 7 cut(s) | 175, 184, 624, 695, 858, 1146, 1178 |
| Alw26I | GTCTC | 6 cut(s) | 167, 193, 624, 826, 930, 1069 |
| AlwI | GGATC | 4 cut(s) | 93, 155, 822, 890 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 695 |
| Ama87I | CYCGRG | 1 cut(s) | 1112 |
| AoxI | GGCC | 5 cut(s) | 390, 517, 672, 1115, 1155 |
| ApeKI | GCWGC | 6 cut(s) | 296, 533, 692, 843, 849, 1143 |
| AspLEI | GCGC | 4 cut(s) | 155, 269, 467, 980 |
| AspS9I | GGNCC | 7 cut(s) | 334, 390, 517, 573, 1109, 1115, 1155 |
| AsuC2I | CCSGG | 3 cut(s) | 385, 1113, 1114 |
| AsuHPI | GGTGA | 3 cut(s) | 253, 442, 764 |
| AsuII | TTCGAA | 1 cut(s) | 1196 |
| AsuNHI | GCTAGC | 1 cut(s) | 1163 |
| AvaI | CYCGRG | 1 cut(s) | 1112 |
| AvaII | GGWCC | 3 cut(s) | 334, 573, 1109 |
| BanI | GGYRCC | 2 cut(s) | 266, 977 |
| BanII | GRGCYC | 1 cut(s) | 719 |
| BbsI | GAAGAC | 3 cut(s) | 768, 1041, 1086 |
| BbvCI | CCTCAGC | 1 cut(s) | 1072 |
| BbvI | GCAGC | 6 cut(s) | 283, 520, 704, 830, 861, 1155 |
| BccI | CCATC | 2 cut(s) | 95, 129 |
| BceAI | ACGGC | 2 cut(s) | 367, 991 |
| BciT130I | CCWGG | 3 cut(s) | 141, 394, 415 |
| BcnI | CCSGG | 3 cut(s) | 385, 1113, 1114 |
| BcoDI | GTCTC | 6 cut(s) | 167, 193, 624, 826, 930, 1069 |
| BfaI | CTAG | 2 cut(s) | 1121, 1164 |
| BfoI | RGCGCY | 2 cut(s) | 270, 981 |
| BglII | AGATCT | 2 cut(s) | 251, 833 |
| Bme1390I | CCNGG | 6 cut(s) | 141, 385, 394, 415, 1113, 1114 |
| Bme18I | GGWCC | 3 cut(s) | 334, 573, 1109 |
| BmeT110I | CYCGRG | 1 cut(s) | 1112 |
| BmgT120I | GGNCC | 7 cut(s) | 334, 390, 517, 573, 1109, 1115, 1155 |
| BmiI | GGNNCC | 4 cut(s) | 268, 518, 979, 1111 |
| BmrFI | CCNGG | 6 cut(s) | 141, 385, 394, 415, 1113, 1114 |
| BmsI | GCATC | 2 cut(s) | 520, 674 |
| BmtI | GCTAGC | 1 cut(s) | 1167 |
| BoxI | GACNNNNGTC | 1 cut(s) | 771 |
| BpiI | GAAGAC | 3 cut(s) | 768, 1041, 1086 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 869, 901 |
| BpmI | CTGGAG | 1 cut(s) | 808 |
| Bpu10I | CCTNAGC | 2 cut(s) | 22, 1072 |
| Bpu14I | TTCGAA | 1 cut(s) | 1196 |
| BpuMI | CCSGG | 3 cut(s) | 385, 1113, 1114 |
| BsaBI | GATNNNNATC | 1 cut(s) | 832 |
| BsaHI | GRCGYC | 2 cut(s) | 267, 978 |
| BsaI | GGTCTC | 2 cut(s) | 826, 1069 |
| BsaJI | CCNNGG | 4 cut(s) | 139, 509, 744, 1112 |
| BsaWI | WCCGGW | 1 cut(s) | 1103 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 21, 51 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 515, 526, 1059, 1103 |
| Bse118I | RCCGGY | 2 cut(s) | 263, 278 |
| Bse1I | ACTGG | 1 cut(s) | 895 |
| Bse3DI | GCAATG | 1 cut(s) | 61 |
| Bse8I | GATNNNNATC | 1 cut(s) | 832 |
| BseBI | CCWGG | 3 cut(s) | 141, 394, 415 |
| BseDI | CCNNGG | 4 cut(s) | 139, 509, 744, 1112 |
| BseGI | GGATG | 4 cut(s) | 121, 402, 535, 1037 |
| BseJI | GATNNNNATC | 1 cut(s) | 832 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 515, 526, 1059, 1103 |
| BseMI | GCAATG | 1 cut(s) | 61 |
| BseMII | CTCAG | 4 cut(s) | 36, 716, 925, 1086 |
| BseNI | ACTGG | 1 cut(s) | 895 |
| BseRI | GAGGAG | 7 cut(s) | 42, 226, 502, 643, 646, 1057, 1060 |
| BseXI | GCAGC | 6 cut(s) | 283, 520, 704, 830, 861, 1155 |
| BseYI | CCCAGC | 1 cut(s) | 1146 |
| BsgI | GTGCAG | 2 cut(s) | 133, 889 |
| Bsh1236I | CGCG | 2 cut(s) | 465, 746 |
| Bsh1285I | CGRYCG | 1 cut(s) | 501 |
| BshFI | GGCC | 5 cut(s) | 392, 519, 674, 1117, 1157 |
| BshNI | GGYRCC | 2 cut(s) | 266, 977 |
| BsiEI | CGRYCG | 1 cut(s) | 501 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1112 |
| BsiSI | CCGG | 7 cut(s) | 264, 279, 385, 853, 864, 1104, 1113 |
| BslFI | GGGAC | 5 cut(s) | 324, 716, 759, 1095, 1226 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 515, 526, 1059, 1103 |
| BsmAI | GTCTC | 6 cut(s) | 167, 193, 624, 826, 930, 1069 |
| BsmBI | CGTCTC | 1 cut(s) | 193 |
| BsmFI | GGGAC | 5 cut(s) | 324, 716, 759, 1095, 1226 |
| BsmI | GAATGC | 1 cut(s) | 111 |
| BsnI | GGCC | 5 cut(s) | 392, 519, 674, 1117, 1157 |
| Bso31I | GGTCTC | 2 cut(s) | 826, 1069 |
| BsoBI | CYCGRG | 1 cut(s) | 1112 |
| Bsp119I | TTCGAA | 1 cut(s) | 1196 |
| Bsp1286I | GDGCHC | 1 cut(s) | 719 |
| Bsp143I | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| BspANI | GGCC | 5 cut(s) | 392, 519, 674, 1117, 1157 |
| BspCNI | CTCAG | 4 cut(s) | 35, 717, 924, 1085 |
| BspFNI | CGCG | 2 cut(s) | 465, 746 |
| BspHI | TCATGA | 1 cut(s) | 1017 |
| BspLI | GGNNCC | 4 cut(s) | 268, 518, 979, 1111 |
| BspOI | GCTAGC | 1 cut(s) | 1167 |
| BspPI | GGATC | 4 cut(s) | 93, 155, 822, 890 |
| BspQI | GCTCTTC | 1 cut(s) | 724 |
| BspT104I | TTCGAA | 1 cut(s) | 1196 |
| BspT107I | GGYRCC | 2 cut(s) | 266, 977 |
| BspTNI | GGTCTC | 2 cut(s) | 826, 1069 |
| BsrBI | CCGCTC | 2 cut(s) | 814, 880 |
| BsrDI | GCAATG | 1 cut(s) | 61 |
| BsrFI | RCCGGY | 2 cut(s) | 263, 278 |
| BsrI | ACTGG | 1 cut(s) | 895 |
| BssAI | RCCGGY | 2 cut(s) | 263, 278 |
| BssECI | CCNNGG | 4 cut(s) | 139, 509, 744, 1112 |
| BssMI | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| BssNI | GRCGYC | 2 cut(s) | 267, 978 |
| Bst2UI | CCWGG | 3 cut(s) | 141, 394, 415 |
| Bst6I | CTCTTC | 7 cut(s) | 196, 232, 724, 808, 958, 1048, 1202 |
| BstACI | GRCGYC | 2 cut(s) | 267, 978 |
| BstBI | TTCGAA | 1 cut(s) | 1196 |
| BstC8I | GCNNGC | 5 cut(s) | 182, 280, 390, 941, 1165 |
| BstDEI | CTNAG | 4 cut(s) | 22, 725, 911, 1072 |
| BstDSI | CCRYGG | 1 cut(s) | 744 |
| BstF5I | GGATG | 4 cut(s) | 121, 402, 535, 1037 |
| BstFNI | CGCG | 2 cut(s) | 465, 746 |
| BstH2I | RGCGCY | 2 cut(s) | 270, 981 |
| BstHHI | GCGC | 4 cut(s) | 155, 269, 467, 980 |
| BstKTI | GATC | 6 cut(s) | 88, 150, 254, 830, 836, 885 |
| BstMAI | GTCTC | 6 cut(s) | 167, 193, 624, 826, 930, 1069 |
| BstMBI | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| BstMCI | CGRYCG | 1 cut(s) | 501 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 181, 275, 288, 671, 743, 849, 855, 864, 1143 |
| BstNI | CCWGG | 3 cut(s) | 141, 394, 415 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 771 |
| BstSCI | CCNGG | 6 cut(s) | 139, 383, 392, 413, 1111, 1112 |
| BstUI | CGCG | 2 cut(s) | 465, 746 |
| BstV1I | GCAGC | 6 cut(s) | 283, 520, 704, 830, 861, 1155 |
| BstV2I | GAAGAC | 3 cut(s) | 768, 1041, 1086 |
| BstX2I | RGATCY | 5 cut(s) | 147, 251, 827, 833, 882 |
| BstYI | RGATCY | 5 cut(s) | 147, 251, 827, 833, 882 |
| BsuRI | GGCC | 5 cut(s) | 392, 519, 674, 1117, 1157 |
| BtgI | CCRYGG | 1 cut(s) | 744 |
| BtsCI | GGATG | 4 cut(s) | 121, 402, 535, 1037 |
| BtsI | GCAGTG | 3 cut(s) | 116, 121, 789 |
| BtsIMutI | CAGTG | 4 cut(s) | 116, 121, 789, 1015 |
| Cac8I | GCNNGC | 5 cut(s) | 182, 280, 390, 941, 1165 |
| CaiI | CAGNNNCTG | 1 cut(s) | 695 |
| CciI | TCATGA | 1 cut(s) | 1017 |
| CfoI | GCGC | 4 cut(s) | 155, 269, 467, 980 |
| Cfr10I | RCCGGY | 2 cut(s) | 263, 278 |
| Cfr13I | GGNCC | 7 cut(s) | 334, 390, 517, 573, 1109, 1115, 1155 |
| Cfr42I | CCGCGG | 1 cut(s) | 747 |
| Cfr9I | CCCGGG | 1 cut(s) | 1112 |
| CpoI | CGGWCCG | 1 cut(s) | 334 |
| CseI | GACGC | 1 cut(s) | 280 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 124, 159, 979, 1014 |
| CspI | CGGWCCG | 1 cut(s) | 334 |
| CviAII | CATG | 5 cut(s) | 94, 526, 1018, 1084, 1171 |
| DdeI | CTNAG | 4 cut(s) | 22, 725, 911, 1072 |
| DinI | GGCGCC | 2 cut(s) | 268, 979 |
| DpnI | GATC | 6 cut(s) | 87, 149, 253, 829, 835, 884 |
| DpnII | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| EaeI | YGGCCR | 1 cut(s) | 672 |
| Eam1104I | CTCTTC | 7 cut(s) | 196, 232, 724, 808, 958, 1048, 1202 |
| EarI | CTCTTC | 7 cut(s) | 196, 232, 724, 808, 958, 1048, 1202 |
| EciI | GGCGGA | 1 cut(s) | 211 |
| Eco24I | GRGCYC | 1 cut(s) | 719 |
| Eco31I | GGTCTC | 2 cut(s) | 826, 1069 |
| Eco47I | GGWCC | 3 cut(s) | 334, 573, 1109 |
| Eco57I | CTGAAG | 3 cut(s) | 610, 780, 1221 |
| Eco88I | CYCGRG | 1 cut(s) | 1112 |
| EcoRII | CCWGG | 3 cut(s) | 139, 392, 413 |
| EcoT38I | GRGCYC | 1 cut(s) | 719 |
| EgeI | GGCGCC | 2 cut(s) | 268, 979 |
| EheI | GGCGCC | 2 cut(s) | 268, 979 |
| Esp3I | CGTCTC | 1 cut(s) | 193 |
| FaeI | CATG | 5 cut(s) | 97, 529, 1021, 1087, 1174 |
| FaiI | YATR | 6 cut(s) | 95, 476, 527, 1019, 1085, 1172 |
| FaqI | GGGAC | 5 cut(s) | 324, 716, 759, 1095, 1226 |
| FatI | CATG | 5 cut(s) | 93, 525, 1017, 1083, 1170 |
| FauI | CCCGC | 1 cut(s) | 381 |
| FblI | GTMKAC | 1 cut(s) | 497 |
| FokI | GGATG | 4 cut(s) | 108, 409, 542, 1024 |
| FriOI | GRGCYC | 1 cut(s) | 719 |
| FspBI | CTAG | 2 cut(s) | 1121, 1164 |
| GlaI | GCGC | 4 cut(s) | 154, 268, 466, 979 |
| GsaI | CCCAGC | 1 cut(s) | 1150 |
| GsuI | CTGGAG | 1 cut(s) | 808 |
| HaeII | RGCGCY | 2 cut(s) | 270, 981 |
| HaeIII | GGCC | 5 cut(s) | 392, 519, 674, 1117, 1157 |
| HapII | CCGG | 7 cut(s) | 264, 279, 385, 853, 864, 1104, 1113 |
| HgaI | GACGC | 1 cut(s) | 280 |
| HhaI | GCGC | 4 cut(s) | 155, 269, 467, 980 |
| Hin1I | GRCGYC | 2 cut(s) | 267, 978 |
| Hin1II | CATG | 5 cut(s) | 97, 529, 1021, 1087, 1174 |
| Hin6I | GCGC | 4 cut(s) | 153, 267, 465, 978 |
| HinP1I | GCGC | 4 cut(s) | 153, 267, 465, 978 |
| HincII | GTYRAC | 2 cut(s) | 498, 1126 |
| HindII | GTYRAC | 2 cut(s) | 498, 1126 |
| HinfI | GANTC | 3 cut(s) | 12, 356, 923 |
| HpaII | CCGG | 7 cut(s) | 264, 279, 385, 853, 864, 1104, 1113 |
| HphI | GGTGA | 3 cut(s) | 253, 442, 764 |
| Hpy166II | GTNNAC | 2 cut(s) | 498, 1126 |
| Hpy188I | TCNGA | 8 cut(s) | 256, 451, 459, 513, 629, 726, 914, 1240 |
| Hpy8I | GTNNAC | 2 cut(s) | 498, 1126 |
| Hpy99I | CGWCG | 2 cut(s) | 296, 374 |
| HpyCH4IV | ACGT | 1 cut(s) | 756 |
| HpyCH4V | TGCA | 4 cut(s) | 109, 114, 906, 1268 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 181, 275, 288, 671, 743, 849, 855, 864, 1143 |
| HpyF3I | CTNAG | 4 cut(s) | 22, 725, 911, 1072 |
| HpySE526I | ACGT | 1 cut(s) | 756 |
| Hsp92I | GRCGYC | 2 cut(s) | 267, 978 |
| Hsp92II | CATG | 5 cut(s) | 97, 529, 1021, 1087, 1174 |
| HspAI | GCGC | 4 cut(s) | 153, 267, 465, 978 |
| KasI | GGCGCC | 2 cut(s) | 266, 977 |
| KroI | GCCGGC | 1 cut(s) | 278 |
| KroNI | GCCGGC | 1 cut(s) | 280 |
| KspI | CCGCGG | 1 cut(s) | 747 |
| Kzo9I | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| LguI | GCTCTTC | 1 cut(s) | 724 |
| LmnI | GCTCC | 4 cut(s) | 304, 489, 855, 1140 |
| Lsp1109I | GCAGC | 6 cut(s) | 283, 520, 704, 830, 861, 1155 |
| LweI | GCATC | 2 cut(s) | 520, 674 |
| MaeI | CTAG | 2 cut(s) | 1121, 1164 |
| MaeII | ACGT | 1 cut(s) | 756 |
| MaeIII | GTNAC | 5 cut(s) | 65, 116, 215, 430, 752 |
| MalI | GATC | 6 cut(s) | 87, 149, 253, 829, 835, 884 |
| MbiI | CCGCTC | 2 cut(s) | 814, 880 |
| MboI | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| MflI | RGATCY | 5 cut(s) | 147, 251, 827, 833, 882 |
| MhlI | GDGCHC | 1 cut(s) | 719 |
| MluCI | AATT | 1 cut(s) | 1269 |
| Mly113I | GGCGCC | 2 cut(s) | 267, 978 |
| MlyI | GAGTC | 2 cut(s) | 365, 932 |
| MroNI | GCCGGC | 1 cut(s) | 278 |
| MspA1I | CMGCKG | 3 cut(s) | 695, 746, 1146 |
| MspI | CCGG | 7 cut(s) | 264, 279, 385, 853, 864, 1104, 1113 |
| MspR9I | CCNGG | 6 cut(s) | 141, 385, 394, 415, 1113, 1114 |
| Mva1269I | GAATGC | 1 cut(s) | 111 |
| MvaI | CCWGG | 3 cut(s) | 141, 394, 415 |
| MvnI | CGCG | 2 cut(s) | 465, 746 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 181, 275, 288, 671, 743, 849, 855, 864, 1143 |
| NaeI | GCCGGC | 1 cut(s) | 280 |
| NarI | GGCGCC | 2 cut(s) | 267, 978 |
| NciI | CCSGG | 3 cut(s) | 385, 1113, 1114 |
| NdeII | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| NgoMIV | GCCGGC | 1 cut(s) | 278 |
| NheI | GCTAGC | 1 cut(s) | 1163 |
| NlaIII | CATG | 5 cut(s) | 97, 529, 1021, 1087, 1174 |
| NlaIV | GGNNCC | 4 cut(s) | 268, 518, 979, 1111 |
| NmeAIII | GCCGAG | 2 cut(s) | 156, 1006 |
| NmuCI | GTSAC | 4 cut(s) | 65, 116, 430, 752 |
| NspV | TTCGAA | 1 cut(s) | 1196 |
| PagI | TCATGA | 1 cut(s) | 1017 |
| PciSI | GCTCTTC | 1 cut(s) | 724 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 183, 762, 1052 |
| PctI | GAATGC | 1 cut(s) | 111 |
| PdiI | GCCGGC | 1 cut(s) | 280 |
| PfeI | GAWTC | 1 cut(s) | 12 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 526 |
| PleI | GAGTC | 2 cut(s) | 364, 931 |
| PluTI | GGCGCC | 2 cut(s) | 270, 981 |
| PpsI | GAGTC | 2 cut(s) | 364, 931 |
| PshAI | GACNNNNGTC | 1 cut(s) | 771 |
| Psp6I | CCWGG | 3 cut(s) | 139, 392, 413 |
| PspFI | CCCAGC | 1 cut(s) | 1146 |
| PspGI | CCWGG | 3 cut(s) | 139, 392, 413 |
| PspN4I | GGNNCC | 4 cut(s) | 268, 518, 979, 1111 |
| PspPI | GGNCC | 7 cut(s) | 334, 390, 517, 573, 1109, 1115, 1155 |
| PstNI | CAGNNNCTG | 1 cut(s) | 695 |
| PsuI | RGATCY | 5 cut(s) | 147, 251, 827, 833, 882 |
| PvuII | CAGCTG | 2 cut(s) | 695, 1146 |
| Rsr2I | CGGWCCG | 1 cut(s) | 334 |
| RsrII | CGGWCCG | 1 cut(s) | 334 |
| SacII | CCGCGG | 1 cut(s) | 747 |
| SalI | GTCGAC | 1 cut(s) | 496 |
| SapI | GCTCTTC | 1 cut(s) | 724 |
| Sau3AI | GATC | 6 cut(s) | 85, 147, 251, 827, 833, 882 |
| Sau96I | GGNCC | 7 cut(s) | 334, 390, 517, 573, 1109, 1115, 1155 |
| SchI | GAGTC | 2 cut(s) | 365, 932 |
| ScrFI | CCNGG | 6 cut(s) | 141, 385, 394, 415, 1113, 1114 |
| SduI | GDGCHC | 1 cut(s) | 719 |
| SfaNI | GCATC | 2 cut(s) | 520, 674 |
| SfoI | GGCGCC | 2 cut(s) | 268, 979 |
| Sfr303I | CCGCGG | 1 cut(s) | 747 |
| SfuI | TTCGAA | 1 cut(s) | 1196 |
| SgrAI | CRCCGGYG | 1 cut(s) | 263 |
| SgrBI | CCGCGG | 1 cut(s) | 747 |
| SinI | GGWCC | 3 cut(s) | 334, 573, 1109 |
| SmaI | CCCGGG | 1 cut(s) | 1114 |
| Sse9I | AATT | 1 cut(s) | 1269 |
| SspDI | GGCGCC | 2 cut(s) | 266, 977 |
| SspMI | CTAG | 2 cut(s) | 1121, 1164 |
| StyD4I | CCNGG | 6 cut(s) | 139, 383, 392, 413, 1111, 1112 |
| TaiI | ACGT | 1 cut(s) | 759 |
| TaqI | TCGA | 7 cut(s) | 497, 612, 810, 876, 887, 921, 1196 |
| TaqII | GACCGA | 1 cut(s) | 322 |
| TasI | AATT | 1 cut(s) | 1269 |
| TauI | GCSGC | 4 cut(s) | 465, 470, 849, 1120 |
| TfiI | GAWTC | 1 cut(s) | 12 |
| TscAI | CASTG | 4 cut(s) | 116, 121, 796, 1015 |
| TseFI | GTSAC | 4 cut(s) | 65, 116, 430, 752 |
| TseI | GCWGC | 6 cut(s) | 296, 533, 692, 843, 849, 1143 |
| Tsp45I | GTSAC | 4 cut(s) | 65, 116, 430, 752 |
| TspDTI | ATGAA | 7 cut(s) | 353, 514, 945, 1006, 1017, 1026, 1100 |
| TspGWI | ACGGA | 1 cut(s) | 326 |
| TspMI | CCCGGG | 1 cut(s) | 1112 |
| TspRI | CASTG | 4 cut(s) | 116, 121, 796, 1015 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 526 |
| VpaK11BI | GGWCC | 3 cut(s) | 334, 573, 1109 |
| XmaI | CCCGGG | 1 cut(s) | 1112 |
| XmiI | GTMKAC | 1 cut(s) | 497 |
| XspI | CTAG | 2 cut(s) | 1121, 1164 |