Belongs to the mitochondrial carrier (TC 2.A.29) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0014261 RchiOBHm_Chr5g0020911 RchiOBHm_Chr6g0266461 RchiOBHm_Chr6g0280331 |
| rosa_multiflora | Rmu_sc0001179.1_g000036 |
| rosa_roxburghii | Rroxscaffold_1G00019480 Rroxscaffold_5G00370150 |
| rosa_rugosa | Rorug07G0231500 |
| rosa_samantha | Rh1AG137500 Rh2CG563900 Rh5BG312300 Rh5CG119800 Rh5CG164800 Rh5CG549700 Rh5DG323000 Rh6AG311200 Rh7CG188700 |
| rosa_wichuraiana | Rw4G016840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 54 |
| AgsI | TTSAA | 2 cut(s) | 52, 155 |
| AjnI | CCWGG | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 95 |
| AluI | AGCT | 1 cut(s) | 95 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| ApoI | RAATTY | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| BciT130I | CCWGG | 1 cut(s) | 60 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfaI | CTAG | 1 cut(s) | 92 |
| Bme1390I | CCNGG | 1 cut(s) | 60 |
| BmrFI | CCNGG | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 1 cut(s) | 59 |
| BseBI | CCWGG | 1 cut(s) | 60 |
| BseDI | CCNNGG | 1 cut(s) | 59 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| BssECI | CCNNGG | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 1 cut(s) | 46 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstNI | CCWGG | 1 cut(s) | 60 |
| BstSCI | CCNGG | 1 cut(s) | 58 |
| CviJI | RGCY | 2 cut(s) | 95, 132 |
| CviKI_1 | RGCY | 2 cut(s) | 95, 132 |
| EcoRII | CCWGG | 1 cut(s) | 58 |
| FaiI | YATR | 2 cut(s) | 31, 37 |
| FspBI | CTAG | 1 cut(s) | 92 |
| HinfI | GANTC | 1 cut(s) | 16 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 1 cut(s) | 66 |
| Hpy8I | GTNNAC | 1 cut(s) | 66 |
| HpyCH4III | ACNGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 2 cut(s) | 29, 119 |
| LpnPI | CCDG | 6 cut(s) | 45, 72, 81, 86, 93, 150 |
| MaeI | CTAG | 1 cut(s) | 92 |
| MluCI | AATT | 3 cut(s) | 22, 54, 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 34 |
| MspR9I | CCNGG | 1 cut(s) | 60 |
| MvaI | CCWGG | 1 cut(s) | 60 |
| PfeI | GAWTC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 1 cut(s) | 58 |
| PspGI | CCWGG | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 60 |
| SetI | ASST | 2 cut(s) | 97, 161 |
| SgeI | CNNG | 8 cut(s) | 52, 71, 72, 104, 108, 113, 120, 149 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 34 |
| Sse9I | AATT | 3 cut(s) | 22, 54, 120 |
| SspI | AATATT | 1 cut(s) | 76 |
| SspMI | CTAG | 1 cut(s) | 92 |
| StyD4I | CCNGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 1 cut(s) | 46 |
| TasI | AATT | 3 cut(s) | 22, 54, 120 |
| TfiI | GAWTC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 1 cut(s) | 29 |
| XapI | RAATTY | 1 cut(s) | 54 |
| XspI | CTAG | 1 cut(s) | 92 |