clathrin assembly
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0014261 RchiOBHm_Chr5g0020911 RchiOBHm_Chr6g0266461 RchiOBHm_Chr6g0280331 |
| rosa_multiflora | Rmu_sc0001179.1_g000036 |
| rosa_roxburghii | Rroxscaffold_1G00019480 Rroxscaffold_5G00370150 |
| rosa_rugosa | Rorug07G0231500 |
| rosa_samantha | Rh1AG137500 Rh2CG563900 Rh5BG312300 Rh5CG119800 Rh5CG164800 Rh5CG549700 Rh5DG323000 Rh6AG311200 Rh7CG188700 |
| rosa_wichuraiana | Rw4G016840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 103, 220 |
| AclWI | GGATC | 1 cut(s) | 113 |
| AcsI | RAATTY | 1 cut(s) | 143 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| AluBI | AGCT | 1 cut(s) | 228 |
| AluI | AGCT | 1 cut(s) | 228 |
| AlwI | GGATC | 1 cut(s) | 113 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| ApoI | RAATTY | 1 cut(s) | 143 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| BbvI | GCAGC | 1 cut(s) | 144 |
| BfaI | CTAG | 1 cut(s) | 78 |
| BisI | GCNGC | 2 cut(s) | 158, 220 |
| BlsI | GCNGC | 2 cut(s) | 159, 221 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 11 |
| BseMII | CTCAG | 2 cut(s) | 21, 123 |
| BseXI | GCAGC | 1 cut(s) | 144 |
| BseYI | CCCAGC | 1 cut(s) | 115 |
| BslFI | GGGAC | 1 cut(s) | 149 |
| BsmFI | GGGAC | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspACI | CCGC | 2 cut(s) | 103, 220 |
| BspCNI | CTCAG | 2 cut(s) | 22, 122 |
| BspPI | GGATC | 1 cut(s) | 113 |
| BssMI | GATC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 1 cut(s) | 138 |
| BstDEI | CTNAG | 2 cut(s) | 30, 109 |
| BstF5I | GGATG | 1 cut(s) | 11 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 225 |
| BstV1I | GCAGC | 1 cut(s) | 144 |
| BstX2I | RGATCY | 1 cut(s) | 105 |
| BstYI | RGATCY | 1 cut(s) | 105 |
| BtsCI | GGATG | 1 cut(s) | 11 |
| Cac8I | GCNNGC | 1 cut(s) | 138 |
| CviAII | CATG | 1 cut(s) | 99 |
| CviJI | RGCY | 5 cut(s) | 66, 113, 119, 219, 228 |
| CviKI_1 | RGCY | 5 cut(s) | 66, 113, 119, 219, 228 |
| DdeI | CTNAG | 2 cut(s) | 30, 109 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| EciI | GGCGGA | 1 cut(s) | 118 |
| FaeI | CATG | 1 cut(s) | 102 |
| FaiI | YATR | 3 cut(s) | 51, 100, 232 |
| FaqI | GGGAC | 1 cut(s) | 149 |
| FatI | CATG | 1 cut(s) | 98 |
| Fnu4HI | GCNGC | 2 cut(s) | 158, 220 |
| Fsp4HI | GCNGC | 2 cut(s) | 158, 220 |
| FspBI | CTAG | 1 cut(s) | 78 |
| GluI | GCNGC | 2 cut(s) | 158, 220 |
| GsaI | CCCAGC | 1 cut(s) | 119 |
| Hin1II | CATG | 1 cut(s) | 102 |
| HindIII | AAGCTT | 1 cut(s) | 226 |
| HinfI | GANTC | 1 cut(s) | 70 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy188III | TCNNGA | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 1 cut(s) | 178 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 225 |
| HpyF3I | CTNAG | 2 cut(s) | 30, 109 |
| Hsp92II | CATG | 1 cut(s) | 102 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LpnPI | CCDG | 2 cut(s) | 129, 134 |
| Lsp1109I | GCAGC | 1 cut(s) | 144 |
| MaeI | CTAG | 1 cut(s) | 78 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MflI | RGATCY | 1 cut(s) | 105 |
| MluCI | AATT | 1 cut(s) | 143 |
| MmeI | TCCRAC | 1 cut(s) | 119 |
| MnlI | CCTC | 2 cut(s) | 25, 189 |
| MseI | TTAA | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 225 |
| NdeII | GATC | 1 cut(s) | 105 |
| NlaIII | CATG | 1 cut(s) | 102 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PkrI | GCNGC | 2 cut(s) | 159, 221 |
| PspFI | CCCAGC | 1 cut(s) | 115 |
| PsuI | RGATCY | 1 cut(s) | 105 |
| SaqAI | TTAA | 1 cut(s) | 188 |
| SatI | GCNGC | 2 cut(s) | 158, 220 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| SetI | ASST | 2 cut(s) | 200, 230 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| Sse9I | AATT | 1 cut(s) | 143 |
| SsiI | CCGC | 2 cut(s) | 103, 220 |
| SspMI | CTAG | 1 cut(s) | 78 |
| TaqI | TCGA | 1 cut(s) | 171 |
| TasI | AATT | 1 cut(s) | 143 |
| TauI | GCSGC | 1 cut(s) | 222 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| Tru1I | TTAA | 1 cut(s) | 188 |
| Tru9I | TTAA | 1 cut(s) | 188 |
| TseI | GCWGC | 1 cut(s) | 157 |
| XapI | RAATTY | 1 cut(s) | 143 |
| XspI | CTAG | 1 cut(s) | 78 |