Rroxscaffold_5G00373540

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
54736538 .. 54745177
8640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00373540.1

Sequence Viewer

Length: 3519 bp
ATGGAGCTGGATCAGGAGAAGAATAGGTGTGCTAATACTAGAGAGAAGCTTACTATTGCTGTGCAGAAAGGCAAGGGATTGGTACAGCAAAGAGACTCATTGAAGCAGTCCATTGCTGAAAAACTGAGTGAGCTTGAGAAGTGTCGGACTGAATTGCAGGAGAAGTCAAGTGCTCTTGAAGCTGCTGAATTAAGCAAGGAGGAATTGATTAGGAGTGAAAACTCAGTTGCATCACTGCAAGAAACACTTTCCCAAAATAATGTAATTCTTCAGAAACTTGAAGAAATGTTGTCTCAGACTGGTGTACCTGAAGAGCTTCAGTCTATGGATATTGTACAGAGACTTCGATGGCTTGTGGATGAAAGTGTTAAACTCAAGGAAATTTCTATGGAATTCCAAACCTTGAAAGATGCTATGTATGCTATTGGTCTACCAGAAGTTATTTCATCTTCTAGTTTGGAATCTCAAGTAAGTTGGCTTCGGGAATCATATTCTCAGGCGAATGAGGAAGTGCTTGTGCTACGTAATGAAATTACTGCAACTAAGGAAGTGGCACATAAAAATATTGACCAGTTAACTGAATCACTTTCAGCTGAATTGCGGGCAAAAGAACATCTCCAAGCAGAGTTGGACAACATAACATCGGAATACAATGAGATTATCAAGAAAGAGCATCAAGTGTCTTTAGAGAAAGCTCAGATGGTCAGAAGGTTACTTGATGTGTCTGGAGTTGTAATGGACAATGAGGATATCTCTCAACTTTCCTCAGACATTGCCACGCTCATTGACACTTGTATTGAGAAGATAAAAGAACAGAGCTCTGCTTCATTTTCAGCTGAAATGCAGGCAAGGGAAGTTCTCCAAGTGGAGTTAGACAGTCTTACATCAAAGTACAAAGTGATAGTTGAAAAGGAGCGTCAAGTATCTTCAGAGAATGCTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAATGAGGATGACTCTCAGCTTTCCTTAGACATTGGCACGTTCATTGACACATGTATAGGGAAGATAAAAGAACAGATCAGTGCTTCATTTGAACAGTCAACTGCTTCGCTTTCAGCTGAAATGCAAGCAAAGGAATATCTCCAAGTAGAGTTGGAGAGTCTAACATCAAAGTACAAAGAGATTGTTGAGAAAGAGCATCAAGTGTCTTCAGAGAAGACTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAATGAAGATGTCTCTCAGCTTTCCTCAGACACTGCCACGCTCATTGATAGATGCATTCAGAAGATAAAAGAACAGAGCAGTGCCTCACTTGATTCTCCAAGTTTCGATGTGGAGCTATTTGAAACAATTCAAAGCCACTTGTACGTAAGAGATCAGGAGTTGATGCTCTGTCGGAATATTCTAGAAGAGGAGATGGTGGTGAAATCAGAGGTGAATAAACTGTCGGAGGAATTACGAATTGTGTCTCAACAAGTTGAGGCATTGAAGGAGGAAAAAGGGTCCCTACAGAGAGATATTGAACGGTCAGAACAGGAGAATGCCATGATAAGGGAGAAGTTATCCGTGGCAGTCAAGGAAGGTAAGGAAATGGTTCAAGAGCGGGGAAATGCTTCATTTGAACAGAGCAGTGCTTCATTTGAACGGTTAACTGCTTCTCTTTCAGCTGAAATGCAGGCAAAGGAATATCTTCAAGTAGAGTTGGAGAGTCTAACATTGAAGTACAAAGAGATTGTTGAGAAAGAGCGTCAAGTGTCTTCAGAGAAGGCTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAGTGAAGATGTCTCTCAGCTTTCCTCAGACACTGCCACACTCATTGATAGATGCATTCAGAAGATAAAAGAACAGAGCAGTGCCTCACTTGATTCTCCAAGTTTTGATGTGGAGCTATTTGAAACAATTCAAAGCCACTTGTACGTAAGAGATCAGGAGTTGATGCTTTGTCAGAATATTCTAGAAGAGGAGATGGTGGTGAAATCAGAGGTGAATAAACTGTTGGAGGAATTACGAATTGTGTCTCAACAAGTTGAGGCATTGAAGGAGGAAAAAGGGTCCCTACAGAGAGATATTGAACGGTCAGAAGAGAAGAATGCTATGATAAGGGAGAAGTTATCCATGGCAGTCAAGAAAGGTAAGGGAATGGTTCAAGAGCGGGAAAACTTGAAACATCGTGTGGAAGAAAAGAACTCGGAGATTGAGAAGCTAAGGCTTGAGTTACAGCAGGAACAATCCGCACTGTCTGAATGCAGGGACAAGATAAATAGCTTGTCTGCTGATACAGACTGCATTCCAAAGTTAGAAGCTGATCTTGTTGCTATGAAGGAACAAAGGGATCAACTCGAACAGTTCTTACTGGAGAGCAATAACATGTTACAGAGAGTAACTAAAGCGATTGATGCAATTGTGCTTCCTGTTGATTCTTTTGAAGAACCTTTGGGGAAGGTGAACTGGCTTGCAGGATACCTGAGTGAATGTCATGATGCTGAGGCAAAAGCAAAGCAAGAGTTGGGAAAAGTACAAGAGGAAACAAGTAATCTTGTGTTTAAGTTGGAAGAAGCCCATTCAACAATAAAATCACTGGAAAATGAATTATCAGTGGCGGAGAATAGTTTGTCACAACTTGCTGAAGAAAAGAGAGAAATGGAAGTCAGTAAGACCAGTGTTGAAAAAGAGTTACAGAGAGCATTAGAAGAAGCTGTTTCCCAGGCTAGCAAGTTTAGTGAGGTTTCTGCAGCTAAAAAGTCGCTGGAAGAAGCATTAGCACTTGCAGAAAATAATATATCTGTTCTTGTCAGTGAAAAAGAGGGGGCTTTAGTCAGTAGAGCCACTGCAGATACAGAGCTAGGAAAGGTCAAAGAGGAAGTTGATATACAGACCAGCAAACTAACAGATGCCTACAAGACCATAGAGTCACTTGAAGTTGTACTTTCTCAGGTACAGGCCAACGTTTCTTTACTTGCTGAACAAAACAATGATGCTCAAATTGGTAGATCCAATTTAGAGGCTGAGCTAAAGAAACTGCAAGAGGAAGCTAGGTTGCAGGATAACAAGCTTGCAGATGCCAGTGCAACCATAAATAAACTGGAAGATGCACTGTTGAAAGCAGGGAATGATATATCTGAACTTGAAACTGGAAAGAAAAATGCTGAAGACGAGATATTAAAACTCAGTTCCAAGTTAAATGCATCCATCGAAGAGTTGCCTGGAACTAATGGCAGCACAGAAAACAGGTCCTTAGAGCTCACTGGTCACCTTGATAATCTTCAAGTGCTCATGAAGGACGAGACTATGCTGTCCACAATGAAAAGATGTTTTGAGAAGAAGTTTGAGAGCCTGAAAGATATGGATCTCATTCTTAAAAATATAAGAGACCAGTGTGTTTCAGGGGGTTTAGCTGAGCTGCGAGGGCAGCAAGTACTGGAGGTATGCACAAGGTTTTTTCAATACTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1172

Amino Acids

132.04

Weight (kDa)

4.66

Isoelectric Point (pI)

50.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2974, 3358
AccBSI CCGCTC 2 cut(s) 1627, 2218
AccI GTMKAC 1 cut(s) 430
AciI CCGC 5 cut(s) 601, 1627, 2218, 2298, 2666
AclI AACGTT 1 cut(s) 3012
AclWI GGATC 4 cut(s) 18, 2406, 3051, 3420
AcsI RAATTY 2 cut(s) 381, 392
AcuI CTGAAG 8 cut(s) 254, 302, 330, 912, 1176, 1767, 2712, 3234
AfiI CCNNNNNNNGG 1 cut(s) 1575
AflIII ACRYGT 2 cut(s) 1034, 2433
AjnI CCWGG 2 cut(s) 2769, 3268
AjuI GAANNNNNNNTTGG 2 cut(s) 2045, 2077
Alw21I GWGCWC 4 cut(s) 175, 821, 3309, 3339
AlwI GGATC 4 cut(s) 18, 2406, 3051, 3420
AlwNI CAGNNNCTG 2 cut(s) 1280, 1871
AoxI GGCC 1 cut(s) 3006
ApeKI GCWGC 5 cut(s) 182, 2798, 3282, 3466, 3475
ApoI RAATTY 2 cut(s) 381, 392
Asp700I GAANNNNTTC 6 cut(s) 315, 1374, 1617, 1636, 1713, 1965
AspS9I GGNCC 3 cut(s) 1527, 2118, 3297
AsuHPI GGTGA 6 cut(s) 1459, 1471, 2050, 2062, 2521, 3308
AsuNHI GCTAGC 1 cut(s) 2774
AvaII GGWCC 3 cut(s) 1527, 2118, 3297
BaeI ACNNNNGTAYC 4 cut(s) 288, 321, 2518, 2551
BanII GRGCYC 2 cut(s) 821, 3309
BarI GAAGNNNNNNTAC 6 cut(s) 327, 359, 462, 494, 2919, 2951
BbsI GAAGAC 4 cut(s) 1182, 1205, 1773, 3222
Bbv12I GWGCWC 4 cut(s) 175, 821, 3309, 3339
BbvCI CCTCAGC 1 cut(s) 2550
BbvI GCAGC 5 cut(s) 169, 2810, 3294, 3453, 3487
BccI CCATC 8 cut(s) 342, 694, 937, 1201, 1435, 1792, 2026, 3263
BciT130I CCWGG 2 cut(s) 2771, 3270
BciVI GTATCC 1 cut(s) 2519
BfaI CTAG 7 cut(s) 39, 453, 1430, 2021, 2775, 2909, 3099
BfmI CTRYAG 4 cut(s) 1532, 2123, 2796, 2895
BfuI GTATCC 1 cut(s) 2519
BisI GCNGC 5 cut(s) 183, 2799, 3283, 3467, 3476
BlpI GCTNAGC 2 cut(s) 3072, 3462
BlsI GCNGC 5 cut(s) 184, 2800, 3284, 3468, 3477
BmcAI AGTACT 1 cut(s) 3483
Bme1390I CCNGG 2 cut(s) 2771, 3270
Bme18I GGWCC 3 cut(s) 1527, 2118, 3297
BmgT120I GGNCC 3 cut(s) 1527, 2118, 3297
BmiI GGNNCC 4 cut(s) 1528, 1529, 2119, 2120
BmrFI CCNGG 2 cut(s) 2771, 3270
BmtI GCTAGC 1 cut(s) 2778
BpiI GAAGAC 4 cut(s) 1182, 1205, 1773, 3222
BplI GAGNNNNNCTC 4 cut(s) 737, 769, 980, 1012
BpmI CTGGAG 3 cut(s) 747, 2441, 3506
Bpu10I CCTNAGC 2 cut(s) 2270, 2550
Bpu1102I GCTNAGC 2 cut(s) 3072, 3462
BpuEI CTTGAG 4 cut(s) 155, 359, 450, 2297
BsaAI YACGTR 3 cut(s) 524, 1393, 1984
BsaBI GATNNNNATC 1 cut(s) 3411
BsaI GGTCTC 1 cut(s) 3429
BsaJI CCNNGG 3 cut(s) 1590, 2181, 2769
Bsc4I CCNNNNNNNGG 1 cut(s) 1575
Bse3DI GCAATG 2 cut(s) 111, 771
Bse8I GATNNNNATC 1 cut(s) 3411
BseBI CCWGG 2 cut(s) 2771, 3270
BseDI CCNNGG 3 cut(s) 1590, 2181, 2769
BseGI GGATG 3 cut(s) 364, 997, 3251
BseJI GATNNNNATC 1 cut(s) 3411
BseLI CCNNNNNNNGG 1 cut(s) 1575
BseMI GCAATG 2 cut(s) 111, 771
BseRI GAGGAG 2 cut(s) 1451, 2042
BseXI GCAGC 5 cut(s) 169, 2810, 3294, 3453, 3487
BsgI GTGCAG 1 cut(s) 83
BshFI GGCC 1 cut(s) 3008
BsiHKAI GWGCWC 4 cut(s) 175, 821, 3309, 3339
BslFI GGGAC 3 cut(s) 1513, 2104, 2330
BslI CCNNNNNNNGG 1 cut(s) 1575
BsmFI GGGAC 3 cut(s) 1513, 2104, 2330
BsmI GAATGC 7 cut(s) 940, 1302, 1570, 1893, 2161, 2315, 2352
BsnI GGCC 1 cut(s) 3008
Bso31I GGTCTC 1 cut(s) 3429
Bsp1286I GDGCHC 4 cut(s) 175, 821, 3309, 3339
Bsp1407I TGTACA 1 cut(s) 334
Bsp143I GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
Bsp1720I GCTNAGC 2 cut(s) 3072, 3462
Bsp19I CCATGG 1 cut(s) 2181
BspACI CCGC 5 cut(s) 601, 1627, 2218, 2298, 2666
BspANI GGCC 1 cut(s) 3008
BspHI TCATGA 2 cut(s) 2542, 3339
BspLI GGNNCC 4 cut(s) 1528, 1529, 2119, 2120
BspMAI CTGCAG 2 cut(s) 2800, 2899
BspOI GCTAGC 1 cut(s) 2778
BspPI GGATC 4 cut(s) 18, 2406, 3051, 3420
BspQI GCTCTTC 1 cut(s) 306
BspTNI GGTCTC 1 cut(s) 3429
BsrBI CCGCTC 2 cut(s) 1627, 2218
BsrDI GCAATG 2 cut(s) 111, 771
BsrGI TGTACA 1 cut(s) 334
BssECI CCNNGG 3 cut(s) 1590, 2181, 2769
BssMI GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
BssT1I CCWWGG 1 cut(s) 2181
Bst2UI CCWGG 2 cut(s) 2771, 3270
Bst6I CTCTTC 5 cut(s) 306, 1428, 2019, 2142, 3255
BstAUI TGTACA 1 cut(s) 334
BstBAI YACGTR 3 cut(s) 524, 1393, 1984
BstC8I GCNNGC 7 cut(s) 603, 846, 1110, 1701, 2520, 2776, 3120
BstDSI CCRYGG 2 cut(s) 1590, 2181
BstEII GGTNACC 1 cut(s) 3314
BstF5I GGATG 3 cut(s) 364, 997, 3251
BstKTI GATC 8 cut(s) 13, 1062, 1402, 1993, 2374, 2401, 3059, 3415
BstMBI GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
BstMWI GCNNNNNNNGC 5 cut(s) 179, 419, 2462, 3472, 3475
BstNI CCWGG 2 cut(s) 2771, 3270
BstNSI RCATGY 2 cut(s) 1038, 2437
BstPI GGTNACC 1 cut(s) 3314
BstSCI CCNGG 2 cut(s) 2769, 3268
BstSFI CTRYAG 4 cut(s) 1532, 2123, 2796, 2895
BstSNI TACGTA 3 cut(s) 524, 1393, 1984
BstV1I GCAGC 5 cut(s) 169, 2810, 3294, 3453, 3487
BstV2I GAAGAC 4 cut(s) 1182, 1205, 1773, 3222
BstX2I RGATCY 2 cut(s) 3056, 3412
BstYI RGATCY 2 cut(s) 3056, 3412
BsuI GTATCC 1 cut(s) 2519
BsuRI GGCC 1 cut(s) 3008
BtgI CCRYGG 2 cut(s) 1590, 2181
BtsCI GGATG 3 cut(s) 364, 997, 3251
BtsI GCAGTG 7 cut(s) 233, 1278, 1333, 1660, 1869, 1924, 2892
Cac8I GCNNGC 7 cut(s) 603, 846, 1110, 1701, 2520, 2776, 3120
CaiI CAGNNNCTG 2 cut(s) 1280, 1871
CciI TCATGA 2 cut(s) 2542, 3339
Cfr13I GGNCC 3 cut(s) 1527, 2118, 3297
CseI GACGC 2 cut(s) 905, 1760
CspCI CAANNNNNGTGG 6 cut(s) 766, 801, 1273, 1308, 1864, 1899
CviAII CATG 6 cut(s) 1035, 1570, 2182, 2434, 2543, 3340
DpnI GATC 8 cut(s) 12, 1061, 1401, 1992, 2373, 2400, 3058, 3414
DpnII GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
DrdI GACNNNNNNGTC 2 cut(s) 2974, 3358
DseDI GACNNNNNNGTC 2 cut(s) 2974, 3358
Eam1104I CTCTTC 5 cut(s) 306, 1428, 2019, 2142, 3255
EarI CTCTTC 5 cut(s) 306, 1428, 2019, 2142, 3255
EciI GGCGGA 1 cut(s) 2681
Ecl136II GAGCTC 2 cut(s) 819, 3307
Eco105I TACGTA 3 cut(s) 524, 1393, 1984
Eco130I CCWWGG 1 cut(s) 2181
Eco24I GRGCYC 2 cut(s) 821, 3309
Eco31I GGTCTC 1 cut(s) 3429
Eco32I GATATC 1 cut(s) 751
Eco47I GGWCC 3 cut(s) 1527, 2118, 3297
Eco53kI GAGCTC 2 cut(s) 819, 3307
Eco57I CTGAAG 8 cut(s) 254, 302, 330, 912, 1176, 1767, 2712, 3234
Eco91I GGTNACC 1 cut(s) 3314
EcoICRI GAGCTC 2 cut(s) 819, 3307
EcoO109I RGGNCCY 3 cut(s) 1527, 2118, 3297
EcoO65I GGTNACC 1 cut(s) 3314
EcoRI GAATTC 1 cut(s) 392
EcoRII CCWGG 2 cut(s) 2769, 3268
EcoRV GATATC 1 cut(s) 751
EcoT14I CCWWGG 1 cut(s) 2181
EcoT22I ATGCAT 3 cut(s) 1304, 1895, 3253
EcoT38I GRGCYC 2 cut(s) 821, 3309
ErhI CCWWGG 1 cut(s) 2181
FaeI CATG 6 cut(s) 1038, 1573, 2185, 2437, 2546, 3343
FalI AAGNNNNNCTT 6 cut(s) 231, 263, 2358, 2390, 2976, 3008
FaqI GGGAC 3 cut(s) 1513, 2104, 2330
FatI CATG 6 cut(s) 1034, 1569, 2181, 2433, 2542, 3339
FauI CCCGC 3 cut(s) 594, 1620, 2211
FblI GTMKAC 1 cut(s) 430
Fnu4HI GCNGC 5 cut(s) 183, 2799, 3283, 3467, 3476
FokI GGATG 3 cut(s) 371, 1004, 3238
FriOI GRGCYC 2 cut(s) 821, 3309
Fsp4HI GCNGC 5 cut(s) 183, 2799, 3283, 3467, 3476
FspBI CTAG 7 cut(s) 39, 453, 1430, 2021, 2775, 2909, 3099
GluI GCNGC 5 cut(s) 183, 2799, 3283, 3467, 3476
GsuI CTGGAG 3 cut(s) 747, 2441, 3506
HaeIII GGCC 1 cut(s) 3008
HgaI GACGC 2 cut(s) 905, 1760
Hin1II CATG 6 cut(s) 1038, 1573, 2185, 2437, 2546, 3343
HincII GTYRAC 3 cut(s) 576, 1083, 1674
HindII GTYRAC 3 cut(s) 576, 1083, 1674
HindIII AAGCTT 2 cut(s) 47, 3116
HpaI GTTAAC 2 cut(s) 576, 1674
HphI GGTGA 6 cut(s) 1459, 1471, 2050, 2062, 2521, 3308
Hpy166II GTNNAC 7 cut(s) 305, 431, 576, 1083, 1674, 2512, 3363
Hpy8I GTNNAC 7 cut(s) 305, 431, 576, 1083, 1674, 2512, 3363
HpyAV CCTTC 8 cut(s) 702, 1507, 1598, 1783, 2098, 2380, 2500, 3337
HpyCH4IV ACGT 5 cut(s) 523, 1022, 1392, 1983, 3012
HpyF10VI GCNNNNNNNGC 5 cut(s) 179, 419, 2462, 3472, 3475
HpySE526I ACGT 5 cut(s) 523, 1022, 1392, 1983, 3012
Hsp92II CATG 6 cut(s) 1038, 1573, 2185, 2437, 2546, 3343
KflI GGGWCCC 2 cut(s) 1527, 2118
KspAI GTTAAC 2 cut(s) 576, 1674
Kzo9I GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 4 cut(s) 4, 913, 1360, 1951
Lsp1109I GCAGC 5 cut(s) 169, 2810, 3294, 3453, 3487
MaeI CTAG 7 cut(s) 39, 453, 1430, 2021, 2775, 2909, 3099
MaeII ACGT 5 cut(s) 523, 1022, 1392, 1983, 3012
MalI GATC 8 cut(s) 12, 1061, 1401, 1992, 2373, 2400, 3058, 3414
MbiI CCGCTC 2 cut(s) 1627, 2218
MboI GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
MfeI CAATTG 1 cut(s) 2466
MflI RGATCY 2 cut(s) 3056, 3412
MhlI GDGCHC 4 cut(s) 175, 821, 3309, 3339
MlyI GAGTC 5 cut(s) 89, 989, 1150, 1741, 2984
MmeI TCCRAC 8 cut(s) 125, 609, 1116, 1400, 1452, 1707, 2043, 2595
Mph1103I ATGCAT 3 cut(s) 1304, 1895, 3253
MroXI GAANNNNTTC 6 cut(s) 315, 1374, 1617, 1636, 1713, 1965
MseI TTAA 8 cut(s) 191, 369, 575, 1673, 2610, 3227, 3245, 3423
MspA1I CMGCKG 4 cut(s) 593, 836, 1100, 1691
MspR9I CCNGG 2 cut(s) 2771, 3270
MunI CAATTG 1 cut(s) 2466
Mva1269I GAATGC 7 cut(s) 940, 1302, 1570, 1893, 2161, 2315, 2352
MvaI CCWGG 2 cut(s) 2771, 3270
MwoI GCNNNNNNNGC 5 cut(s) 179, 419, 2462, 3472, 3475
NcoI CCATGG 1 cut(s) 2181
NdeII GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
NheI GCTAGC 1 cut(s) 2774
NlaIII CATG 6 cut(s) 1038, 1573, 2185, 2437, 2546, 3343
NlaIV GGNNCC 4 cut(s) 1528, 1529, 2119, 2120
NmuCI GTSAC 3 cut(s) 2679, 2976, 3314
NsiI ATGCAT 3 cut(s) 1304, 1895, 3253
NspI RCATGY 2 cut(s) 1038, 2437
PagI TCATGA 2 cut(s) 2542, 3339
PciI ACATGT 2 cut(s) 1034, 2433
PciSI GCTCTTC 1 cut(s) 306
PctI GAATGC 7 cut(s) 940, 1302, 1570, 1893, 2161, 2315, 2352
PdmI GAANNNNTTC 6 cut(s) 315, 1374, 1617, 1636, 1713, 1965
PfeI GAWTC 6 cut(s) 461, 485, 581, 1340, 1931, 2483
PkrI GCNGC 5 cut(s) 184, 2800, 3284, 3468, 3477
PleI GAGTC 5 cut(s) 89, 989, 1149, 1740, 2983
PpsI GAGTC 5 cut(s) 89, 989, 1149, 1740, 2983
Ppu21I YACGTR 3 cut(s) 524, 1393, 1984
PpuMI RGGWCCY 3 cut(s) 1527, 2118, 3297
PscI ACATGT 2 cut(s) 1034, 2433
Psp124BI GAGCTC 2 cut(s) 821, 3309
Psp1406I AACGTT 1 cut(s) 3012
Psp5II RGGWCCY 3 cut(s) 1527, 2118, 3297
Psp6I CCWGG 2 cut(s) 2769, 3268
PspEI GGTNACC 1 cut(s) 3314
PspGI CCWGG 2 cut(s) 2769, 3268
PspN4I GGNNCC 4 cut(s) 1528, 1529, 2119, 2120
PspPI GGNCC 3 cut(s) 1527, 2118, 3297
PspPPI RGGWCCY 3 cut(s) 1527, 2118, 3297
PsrI GAACNNNNNNTAC 2 cut(s) 2400, 2432
PstI CTGCAG 2 cut(s) 2800, 2899
PstNI CAGNNNCTG 2 cut(s) 1280, 1871
PsuI RGATCY 2 cut(s) 3056, 3412
PvuII CAGCTG 4 cut(s) 593, 836, 1100, 1691
SacI GAGCTC 2 cut(s) 821, 3309
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 8 cut(s) 191, 369, 575, 1673, 2610, 3227, 3245, 3423
SatI GCNGC 5 cut(s) 183, 2799, 3283, 3467, 3476
Sau3AI GATC 8 cut(s) 10, 1059, 1399, 1990, 2371, 2398, 3056, 3412
Sau96I GGNCC 3 cut(s) 1527, 2118, 3297
ScaI AGTACT 1 cut(s) 3483
SchI GAGTC 5 cut(s) 89, 989, 1150, 1741, 2984
ScrFI CCNGG 2 cut(s) 2771, 3270
SduI GDGCHC 4 cut(s) 175, 821, 3309, 3339
SfcI CTRYAG 4 cut(s) 1532, 2123, 2796, 2895
SinI GGWCC 3 cut(s) 1527, 2118, 3297
SmlI CTYRAG 4 cut(s) 134, 374, 465, 2276
SmoI CTYRAG 4 cut(s) 134, 374, 465, 2276
SnaBI TACGTA 3 cut(s) 524, 1393, 1984
SsiI CCGC 5 cut(s) 601, 1627, 2218, 2298, 2666
SspI AATATT 3 cut(s) 565, 1426, 2017
SspMI CTAG 7 cut(s) 39, 453, 1430, 2021, 2775, 2909, 3099
SstI GAGCTC 2 cut(s) 821, 3309
StyD4I CCNGG 2 cut(s) 2769, 3268
StyI CCWWGG 1 cut(s) 2181
TaiI ACGT 5 cut(s) 526, 1025, 1395, 1986, 3015
TaqI TCGA 4 cut(s) 346, 1353, 2406, 3258
TatI WGTACW 7 cut(s) 334, 891, 1155, 1746, 2581, 2989, 3481
TfiI GAWTC 6 cut(s) 461, 485, 581, 1340, 1931, 2483
Tru1I TTAA 8 cut(s) 191, 369, 575, 1673, 2610, 3227, 3245, 3423
Tru9I TTAA 8 cut(s) 191, 369, 575, 1673, 2610, 3227, 3245, 3423
TseFI GTSAC 3 cut(s) 2679, 2976, 3314
TseI GCWGC 5 cut(s) 182, 2798, 3282, 3466, 3475
Tsp45I GTSAC 3 cut(s) 2679, 2976, 3314
TspGWI ACGGA 1 cut(s) 1579
VpaK11BI GGWCC 3 cut(s) 1527, 2118, 3297
XapI RAATTY 2 cut(s) 381, 392
XbaI TCTAGA 2 cut(s) 1429, 2020
XceI RCATGY 2 cut(s) 1038, 2437
XcmI CCANNNNNNNNNTGG 1 cut(s) 3145
XmiI GTMKAC 1 cut(s) 430
XmnI GAANNNNTTC 6 cut(s) 315, 1374, 1617, 1636, 1713, 1965
XspI CTAG 7 cut(s) 39, 453, 1430, 2021, 2775, 2909, 3099
ZrmI AGTACT 1 cut(s) 3483
Zsp2I ATGCAT 3 cut(s) 1304, 1895, 3253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.