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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24460 AT1G24460 |
| fragaria_vesca | FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 |
| malus_domestica | MD13G1107800.v1.1 MD16G1107700.v1.1 |
| prunus_persica | Prupe.1G238600_v2.0.a1 |
| pyrus_communis | pycom01g03020 pycom13g09320 pycom16g09190 |
| rosa_chinensis | RchiOBHm_Chr4g0431991 |
| rosa_laevigata | RLG00000006869 |
| rosa_multiflora | Rmu_co8237653.1_g000001 Rmu_co8348741.1_g000001 Rmu_sc0003919.1_g000022 Rmu_sc0004965.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00373540 |
| rosa_rugosa | Rorug04G0254100 |
| rosa_samantha | Rh4AG311400 Rh4BG318500 Rh4CG333800 Rh4DG313400 |
| rosa_wichuraiana | Rw4G027070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 3952, 4336 |
| AatII | GACGTC | 1 cut(s) | 72 |
| Acc16I | TGCGCA | 1 cut(s) | 6038 |
| Acc36I | ACCTGC | 1 cut(s) | 5746 |
| AccBSI | CCGCTC | 2 cut(s) | 2605, 3196 |
| AccI | GTMKAC | 2 cut(s) | 1408, 5090 |
| AccII | CGCG | 2 cut(s) | 122, 4611 |
| AclI | AACGTT | 2 cut(s) | 187, 3990 |
| AclWI | GGATC | 7 cut(s) | 534, 3384, 4029, 4398, 5169, 5995, 6077 |
| AcoI | YGGCCR | 1 cut(s) | 22 |
| AcuI | CTGAAG | 9 cut(s) | 182, 1232, 1308, 1890, 2154, 2745, 3690, 4212, 6132 |
| AcyI | GRCGYC | 2 cut(s) | 69, 6264 |
| AdeI | CACNNNGTG | 1 cut(s) | 4700 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 31, 329, 586, 779, 6179 |
| AflIII | ACRYGT | 5 cut(s) | 141, 691, 1769, 2012, 3411 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 124, 5713 |
| AhlI | ACTAGT | 2 cut(s) | 209, 685 |
| AjiI | CACGTC | 1 cut(s) | 708 |
| AjnI | CCWGG | 5 cut(s) | 488, 3701, 3747, 4246, 5916 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3023, 3055 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 128, 160 |
| Alw21I | GWGCWC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| AlwI | GGATC | 7 cut(s) | 534, 3384, 4029, 4398, 5169, 5995, 6077 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2258, 2849 |
| AoxI | GGCC | 5 cut(s) | 22, 486, 3075, 3984, 6133 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 1293, 1491, 2352, 2595, 2614, 2943, 6052 |
| AspLEI | GCGC | 2 cut(s) | 4611, 6039 |
| AspS9I | GGNCC | 3 cut(s) | 2505, 3096, 4275 |
| AsuC2I | CCSGG | 2 cut(s) | 733, 781 |
| AsuII | TTCGAA | 3 cut(s) | 50, 147, 289 |
| AvaII | GGWCC | 3 cut(s) | 2505, 3096, 4275 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1266, 1299, 3496, 3529 |
| BanII | GRGCYC | 4 cut(s) | 504, 849, 1799, 4287 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1305, 1337, 1440, 1472, 3897, 3929 |
| BbsI | GAAGAC | 5 cut(s) | 878, 2160, 2751, 4589, 5346 |
| Bbv12I | GWGCWC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| BbvCI | CCTCAGC | 2 cut(s) | 3528, 4539 |
| BceAI | ACGGC | 1 cut(s) | 400 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3755, 3789, 5699, 5733 |
| BciT130I | CCWGG | 5 cut(s) | 490, 3703, 3749, 4248, 5918 |
| BciVI | GTATCC | 2 cut(s) | 199, 3497 |
| BclI | TGATCA | 3 cut(s) | 313, 787, 4291 |
| BcnI | CCSGG | 2 cut(s) | 733, 781 |
| BcuI | ACTAGT | 2 cut(s) | 209, 685 |
| BfmI | CTRYAG | 6 cut(s) | 393, 2510, 3101, 3774, 3873, 5537 |
| BfuAI | ACCTGC | 1 cut(s) | 5746 |
| BfuI | GTATCC | 2 cut(s) | 199, 3497 |
| BlpI | GCTNAGC | 3 cut(s) | 4050, 4440, 5901 |
| BmcAI | AGTACT | 1 cut(s) | 4461 |
| Bme1390I | CCNGG | 7 cut(s) | 490, 733, 781, 3703, 3749, 4248, 5918 |
| Bme18I | GGWCC | 3 cut(s) | 2505, 3096, 4275 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 124, 5713 |
| BmgBI | CACGTC | 1 cut(s) | 708 |
| BmgT120I | GGNCC | 3 cut(s) | 2505, 3096, 4275 |
| BmiI | GGNNCC | 5 cut(s) | 2506, 2507, 3097, 3098, 6055 |
| BmrFI | CCNGG | 7 cut(s) | 490, 733, 781, 3703, 3749, 4248, 5918 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5737 |
| BpiI | GAAGAC | 5 cut(s) | 878, 2160, 2751, 4589, 5346 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1715, 1747, 1958, 1990 |
| BpmI | CTGGAG | 4 cut(s) | 1007, 1725, 3419, 4484 |
| Bpu10I | CCTNAGC | 6 cut(s) | 299, 632, 3248, 3528, 4539, 5802 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 4050, 4440, 5901 |
| Bpu14I | TTCGAA | 3 cut(s) | 50, 147, 289 |
| BpuEI | CTTGAG | 8 cut(s) | 863, 1133, 1337, 1428, 3275, 4799, 4928, 5871 |
| BpuMI | CCSGG | 2 cut(s) | 733, 781 |
| Bsa29I | ATCGAT | 2 cut(s) | 5478, 6081 |
| BsaAI | YACGTR | 3 cut(s) | 1502, 2371, 2962 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1438, 4389, 5399, 6081 |
| BsaHI | GRCGYC | 2 cut(s) | 69, 6264 |
| BsaI | GGTCTC | 5 cut(s) | 311, 548, 770, 4407, 4952 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 128, 158, 458, 488 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 31, 329, 586, 779, 6179 |
| Bse118I | RCCGGY | 2 cut(s) | 24, 79 |
| Bse3DI | GCAATG | 3 cut(s) | 1089, 1749, 6267 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1438, 4389, 5399, 6081 |
| BseBI | CCWGG | 5 cut(s) | 490, 3703, 3749, 4248, 5918 |
| BseCI | ATCGAT | 2 cut(s) | 5478, 6081 |
| BseJI | GATNNNNATC | 4 cut(s) | 1438, 4389, 5399, 6081 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 31, 329, 586, 779, 6179 |
| BseMI | GCAATG | 3 cut(s) | 1089, 1749, 6267 |
| BseRI | GAGGAG | 4 cut(s) | 2429, 3020, 3140, 5600 |
| BseX3I | CGGCCG | 1 cut(s) | 22 |
| BsgI | GTGCAG | 2 cut(s) | 1061, 4572 |
| Bsh1236I | CGCG | 2 cut(s) | 122, 4611 |
| Bsh1285I | CGRYCG | 1 cut(s) | 25 |
| BshFI | GGCC | 5 cut(s) | 24, 488, 3077, 3986, 6135 |
| BshVI | ATCGAT | 2 cut(s) | 5478, 6081 |
| BsiEI | CGRYCG | 1 cut(s) | 25 |
| BsiHKAI | GWGCWC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| BsiSI | CCGG | 6 cut(s) | 21, 25, 32, 80, 733, 780 |
| BslFI | GGGAC | 4 cut(s) | 2491, 3082, 3308, 5745 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 31, 329, 586, 779, 6179 |
| BsmBI | CGTCTC | 1 cut(s) | 5700 |
| BsmFI | GGGAC | 4 cut(s) | 2491, 3082, 3308, 5745 |
| BsmI | GAATGC | 7 cut(s) | 58, 961, 1918, 2548, 2871, 3139, 3293 |
| BsnI | GGCC | 5 cut(s) | 24, 488, 3077, 3986, 6135 |
| Bso31I | GGTCTC | 5 cut(s) | 311, 548, 770, 4407, 4952 |
| Bsp119I | TTCGAA | 3 cut(s) | 50, 147, 289 |
| Bsp1286I | GDGCHC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 4050, 4440, 5901 |
| Bsp19I | CCATGG | 1 cut(s) | 3159 |
| BspANI | GGCC | 5 cut(s) | 24, 488, 3077, 3986, 6135 |
| BspDI | ATCGAT | 2 cut(s) | 5478, 6081 |
| BspFNI | CGCG | 2 cut(s) | 122, 4611 |
| BspHI | TCATGA | 1 cut(s) | 3520 |
| BspLI | GGNNCC | 5 cut(s) | 2506, 2507, 3097, 3098, 6055 |
| BspMAI | CTGCAG | 2 cut(s) | 397, 3778 |
| BspMI | ACCTGC | 1 cut(s) | 5746 |
| BspPI | GGATC | 7 cut(s) | 534, 3384, 4029, 4398, 5169, 5995, 6077 |
| BspQI | GCTCTTC | 3 cut(s) | 5, 1284, 5526 |
| BspT104I | TTCGAA | 3 cut(s) | 50, 147, 289 |
| BspTNI | GGTCTC | 5 cut(s) | 311, 548, 770, 4407, 4952 |
| BsrBI | CCGCTC | 2 cut(s) | 2605, 3196 |
| BsrDI | GCAATG | 3 cut(s) | 1089, 1749, 6267 |
| BsrFI | RCCGGY | 2 cut(s) | 24, 79 |
| BssAI | RCCGGY | 2 cut(s) | 24, 79 |
| BssNI | GRCGYC | 2 cut(s) | 69, 6264 |
| BssT1I | CCWWGG | 3 cut(s) | 3159, 5859, 6248 |
| Bst2UI | CCWGG | 5 cut(s) | 490, 3703, 3749, 4248, 5918 |
| BstACI | GRCGYC | 2 cut(s) | 69, 6264 |
| BstBAI | YACGTR | 3 cut(s) | 1502, 2371, 2962 |
| BstBI | TTCGAA | 3 cut(s) | 50, 147, 289 |
| BstC8I | GCNNGC | 9 cut(s) | 26, 238, 1581, 1824, 2088, 2679, 3498, 4098, 5032 |
| BstDSI | CCRYGG | 4 cut(s) | 416, 2568, 3159, 4962 |
| BstFNI | CGCG | 2 cut(s) | 122, 4611 |
| BstHHI | GCGC | 2 cut(s) | 4611, 6039 |
| BstMCI | CGRYCG | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 21, 89, 1157, 1397, 3440, 4453, 6043, 6286, 6295 |
| BstNI | CCWGG | 5 cut(s) | 490, 3703, 3749, 4248, 5918 |
| BstNSI | RCATGY | 6 cut(s) | 145, 695, 1773, 2016, 3415, 4732 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5737 |
| BstSCI | CCNGG | 7 cut(s) | 488, 731, 779, 3701, 3747, 4246, 5916 |
| BstSFI | CTRYAG | 6 cut(s) | 393, 2510, 3101, 3774, 3873, 5537 |
| BstSNI | TACGTA | 3 cut(s) | 1502, 2371, 2962 |
| BstUI | CGCG | 2 cut(s) | 122, 4611 |
| BstV2I | GAAGAC | 5 cut(s) | 878, 2160, 2751, 4589, 5346 |
| BstX2I | RGATCY | 3 cut(s) | 4034, 4390, 5161 |
| BstYI | RGATCY | 3 cut(s) | 4034, 4390, 5161 |
| BstZI | CGGCCG | 1 cut(s) | 22 |
| Bsu15I | ATCGAT | 2 cut(s) | 5478, 6081 |
| BsuI | GTATCC | 2 cut(s) | 199, 3497 |
| BsuRI | GGCC | 5 cut(s) | 24, 488, 3077, 3986, 6135 |
| BsuTUI | ATCGAT | 2 cut(s) | 5478, 6081 |
| BtgI | CCRYGG | 4 cut(s) | 416, 2568, 3159, 4962 |
| BtrI | CACGTC | 1 cut(s) | 708 |
| BtsI | GCAGTG | 8 cut(s) | 402, 1211, 2047, 2256, 2311, 2638, 2847, 2902 |
| BveI | ACCTGC | 1 cut(s) | 5746 |
| Cac8I | GCNNGC | 9 cut(s) | 26, 238, 1581, 1824, 2088, 2679, 3498, 4098, 5032 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2258, 2849 |
| CciI | TCATGA | 1 cut(s) | 3520 |
| CfoI | GCGC | 2 cut(s) | 4611, 6039 |
| Cfr10I | RCCGGY | 2 cut(s) | 24, 79 |
| Cfr13I | GGNCC | 3 cut(s) | 2505, 3096, 4275 |
| ClaI | ATCGAT | 2 cut(s) | 5478, 6081 |
| CseI | GACGC | 8 cut(s) | 128, 1883, 2147, 2738, 2745, 5076, 5242, 6253 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1744, 1779, 2251, 2286, 5061, 5096 |
| DraI | TTTAAA | 1 cut(s) | 4741 |
| DraIII | CACNNNGTG | 1 cut(s) | 4700 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 3952, 4336 |
| DriI | GACNNNNNGTC | 2 cut(s) | 124, 5713 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 3952, 4336 |
| EaeI | YGGCCR | 1 cut(s) | 22 |
| EagI | CGGCCG | 1 cut(s) | 22 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 124, 5713 |
| EciI | GGCGGA | 2 cut(s) | 3659, 5210 |
| Ecl136II | GAGCTC | 4 cut(s) | 502, 847, 1797, 4285 |
| EclXI | CGGCCG | 1 cut(s) | 22 |
| Eco105I | TACGTA | 3 cut(s) | 1502, 2371, 2962 |
| Eco130I | CCWWGG | 3 cut(s) | 3159, 5859, 6248 |
| Eco147I | AGGCCT | 1 cut(s) | 3077 |
| Eco24I | GRGCYC | 4 cut(s) | 504, 849, 1799, 4287 |
| Eco31I | GGTCTC | 5 cut(s) | 311, 548, 770, 4407, 4952 |
| Eco32I | GATATC | 4 cut(s) | 166, 5967, 6009, 6079 |
| Eco47I | GGWCC | 3 cut(s) | 2505, 3096, 4275 |
| Eco52I | CGGCCG | 1 cut(s) | 22 |
| Eco53kI | GAGCTC | 4 cut(s) | 502, 847, 1797, 4285 |
| Eco57I | CTGAAG | 9 cut(s) | 182, 1232, 1308, 1890, 2154, 2745, 3690, 4212, 6132 |
| EcoICRI | GAGCTC | 4 cut(s) | 502, 847, 1797, 4285 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2505, 3096, 4275 |
| EcoRI | GAATTC | 2 cut(s) | 291, 1370 |
| EcoRII | CCWGG | 5 cut(s) | 488, 3701, 3747, 4246, 5916 |
| EcoRV | GATATC | 4 cut(s) | 166, 5967, 6009, 6079 |
| EcoT14I | CCWWGG | 3 cut(s) | 3159, 5859, 6248 |
| EcoT22I | ATGCAT | 4 cut(s) | 595, 2873, 4231, 6160 |
| EcoT38I | GRGCYC | 4 cut(s) | 504, 849, 1799, 4287 |
| ErhI | CCWWGG | 3 cut(s) | 3159, 5859, 6248 |
| Esp3I | CGTCTC | 1 cut(s) | 5700 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1209, 1241, 3336, 3368, 3954, 3986, 5450, 5482 |
| FaqI | GGGAC | 4 cut(s) | 2491, 3082, 3308, 5745 |
| FauI | CCCGC | 4 cut(s) | 115, 1572, 2598, 3189 |
| FauNDI | CATATG | 1 cut(s) | 4477 |
| FbaI | TGATCA | 3 cut(s) | 313, 787, 4291 |
| FblI | GTMKAC | 2 cut(s) | 1408, 5090 |
| FriOI | GRGCYC | 4 cut(s) | 504, 849, 1799, 4287 |
| FspAI | RTGCGCAY | 1 cut(s) | 6038 |
| FspI | TGCGCA | 1 cut(s) | 6038 |
| GlaI | GCGC | 2 cut(s) | 4610, 6038 |
| GsuI | CTGGAG | 4 cut(s) | 1007, 1725, 3419, 4484 |
| HaeIII | GGCC | 5 cut(s) | 24, 488, 3077, 3986, 6135 |
| HapII | CCGG | 6 cut(s) | 21, 25, 32, 80, 733, 780 |
| HgaI | GACGC | 8 cut(s) | 128, 1883, 2147, 2738, 2745, 5076, 5242, 6253 |
| HhaI | GCGC | 2 cut(s) | 4611, 6039 |
| Hin1I | GRCGYC | 2 cut(s) | 69, 6264 |
| Hin6I | GCGC | 2 cut(s) | 4609, 6037 |
| HinP1I | GCGC | 2 cut(s) | 4609, 6037 |
| HincII | GTYRAC | 6 cut(s) | 454, 650, 1554, 2061, 2652, 5544 |
| HindII | GTYRAC | 6 cut(s) | 454, 650, 1554, 2061, 2652, 5544 |
| HindIII | AAGCTT | 3 cut(s) | 1025, 4094, 5046 |
| HpaI | GTTAAC | 3 cut(s) | 454, 1554, 2652 |
| HpaII | CCGG | 6 cut(s) | 21, 25, 32, 80, 733, 780 |
| Hpy99I | CGWCG | 3 cut(s) | 71, 74, 164 |
| HpyCH4IV | ACGT | 9 cut(s) | 69, 187, 707, 1501, 2000, 2370, 2961, 3990, 5135 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 21, 89, 1157, 1397, 3440, 4453, 6043, 6286, 6295 |
| HpySE526I | ACGT | 9 cut(s) | 69, 187, 707, 1501, 2000, 2370, 2961, 3990, 5135 |
| Hsp92I | GRCGYC | 2 cut(s) | 69, 6264 |
| HspAI | GCGC | 2 cut(s) | 4609, 6037 |
| KflI | GGGWCCC | 2 cut(s) | 2505, 3096 |
| KroI | GCCGGC | 1 cut(s) | 24 |
| KroNI | GCCGGC | 1 cut(s) | 26 |
| Ksp22I | TGATCA | 3 cut(s) | 313, 787, 4291 |
| KspAI | GTTAAC | 3 cut(s) | 454, 1554, 2652 |
| LguI | GCTCTTC | 3 cut(s) | 5, 1284, 5526 |
| LmnI | GCTCC | 7 cut(s) | 982, 988, 1891, 2338, 2929, 4943, 5925 |
| MaeII | ACGT | 9 cut(s) | 69, 187, 707, 1501, 2000, 2370, 2961, 3990, 5135 |
| MbiI | CCGCTC | 2 cut(s) | 2605, 3196 |
| MfeI | CAATTG | 3 cut(s) | 3444, 5094, 6072 |
| MflI | RGATCY | 3 cut(s) | 4034, 4390, 5161 |
| MhlI | GDGCHC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| Mph1103I | ATGCAT | 4 cut(s) | 595, 2873, 4231, 6160 |
| MroNI | GCCGGC | 1 cut(s) | 24 |
| MroXI | GAANNNNTTC | 7 cut(s) | 1293, 1491, 2352, 2595, 2614, 2943, 6052 |
| MslI | CAYNNNNRTG | 2 cut(s) | 710, 734 |
| MspA1I | CMGCKG | 5 cut(s) | 202, 1571, 2078, 2669, 4893 |
| MspI | CCGG | 6 cut(s) | 21, 25, 32, 80, 733, 780 |
| MspR9I | CCNGG | 7 cut(s) | 490, 733, 781, 3703, 3749, 4248, 5918 |
| MunI | CAATTG | 3 cut(s) | 3444, 5094, 6072 |
| Mva1269I | GAATGC | 7 cut(s) | 58, 961, 1918, 2548, 2871, 3139, 3293 |
| MvaI | CCWGG | 5 cut(s) | 490, 3703, 3749, 4248, 5918 |
| MvnI | CGCG | 2 cut(s) | 122, 4611 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 21, 89, 1157, 1397, 3440, 4453, 6043, 6286, 6295 |
| NaeI | GCCGGC | 1 cut(s) | 26 |
| NciI | CCSGG | 2 cut(s) | 733, 781 |
| NcoI | CCATGG | 1 cut(s) | 3159 |
| NdeI | CATATG | 1 cut(s) | 4477 |
| NgoMIV | GCCGGC | 1 cut(s) | 24 |
| NlaIV | GGNNCC | 5 cut(s) | 2506, 2507, 3097, 3098, 6055 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| NmuCI | GTSAC | 5 cut(s) | 575, 3657, 3954, 4480, 4623 |
| NsbI | TGCGCA | 1 cut(s) | 6038 |
| NsiI | ATGCAT | 4 cut(s) | 595, 2873, 4231, 6160 |
| NspI | RCATGY | 6 cut(s) | 145, 695, 1773, 2016, 3415, 4732 |
| NspV | TTCGAA | 3 cut(s) | 50, 147, 289 |
| PagI | TCATGA | 1 cut(s) | 3520 |
| PceI | AGGCCT | 1 cut(s) | 3077 |
| PciI | ACATGT | 5 cut(s) | 141, 691, 1769, 2012, 3411 |
| PciSI | GCTCTTC | 3 cut(s) | 5, 1284, 5526 |
| PctI | GAATGC | 7 cut(s) | 58, 961, 1918, 2548, 2871, 3139, 3293 |
| PdiI | GCCGGC | 1 cut(s) | 26 |
| PdmI | GAANNNNTTC | 7 cut(s) | 1293, 1491, 2352, 2595, 2614, 2943, 6052 |
| PflFI | GACNNNGTC | 1 cut(s) | 882 |
| PfoI | TCCNGGA | 1 cut(s) | 5916 |
| Ppu21I | YACGTR | 3 cut(s) | 1502, 2371, 2962 |
| PpuMI | RGGWCCY | 3 cut(s) | 2505, 3096, 4275 |
| PscI | ACATGT | 5 cut(s) | 141, 691, 1769, 2012, 3411 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5737 |
| Psp124BI | GAGCTC | 4 cut(s) | 504, 849, 1799, 4287 |
| Psp1406I | AACGTT | 2 cut(s) | 187, 3990 |
| Psp5II | RGGWCCY | 3 cut(s) | 2505, 3096, 4275 |
| Psp6I | CCWGG | 5 cut(s) | 488, 3701, 3747, 4246, 5916 |
| PspGI | CCWGG | 5 cut(s) | 488, 3701, 3747, 4246, 5916 |
| PspN4I | GGNNCC | 5 cut(s) | 2506, 2507, 3097, 3098, 6055 |
| PspPI | GGNCC | 3 cut(s) | 2505, 3096, 4275 |
| PspPPI | RGGWCCY | 3 cut(s) | 2505, 3096, 4275 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3378, 3410 |
| PstI | CTGCAG | 2 cut(s) | 397, 3778 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2258, 2849 |
| PsuI | RGATCY | 3 cut(s) | 4034, 4390, 5161 |
| PsyI | GACNNNGTC | 1 cut(s) | 882 |
| PvuII | CAGCTG | 4 cut(s) | 202, 1571, 2078, 2669 |
| RseI | CAYNNNNRTG | 2 cut(s) | 710, 734 |
| SacI | GAGCTC | 4 cut(s) | 504, 849, 1799, 4287 |
| SapI | GCTCTTC | 3 cut(s) | 5, 1284, 5526 |
| Sau96I | GGNCC | 3 cut(s) | 2505, 3096, 4275 |
| ScaI | AGTACT | 1 cut(s) | 4461 |
| ScrFI | CCNGG | 7 cut(s) | 490, 733, 781, 3703, 3749, 4248, 5918 |
| SduI | GDGCHC | 6 cut(s) | 504, 849, 1153, 1799, 4287, 4728 |
| SfcI | CTRYAG | 6 cut(s) | 393, 2510, 3101, 3774, 3873, 5537 |
| SfuI | TTCGAA | 3 cut(s) | 50, 147, 289 |
| SgrAI | CRCCGGYG | 1 cut(s) | 79 |
| SinI | GGWCC | 3 cut(s) | 2505, 3096, 4275 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 710, 734 |
| SmlI | CTYRAG | 8 cut(s) | 842, 1112, 1352, 1443, 3254, 4814, 4907, 5886 |
| SmoI | CTYRAG | 8 cut(s) | 842, 1112, 1352, 1443, 3254, 4814, 4907, 5886 |
| SnaBI | TACGTA | 3 cut(s) | 1502, 2371, 2962 |
| SpeI | ACTAGT | 2 cut(s) | 209, 685 |
| SseBI | AGGCCT | 1 cut(s) | 3077 |
| SspI | AATATT | 6 cut(s) | 1543, 2404, 2995, 4513, 5311, 5485 |
| SstI | GAGCTC | 4 cut(s) | 504, 849, 1799, 4287 |
| StuI | AGGCCT | 1 cut(s) | 3077 |
| StyD4I | CCNGG | 7 cut(s) | 488, 731, 779, 3701, 3747, 4246, 5916 |
| StyI | CCWWGG | 3 cut(s) | 3159, 5859, 6248 |
| TaiI | ACGT | 9 cut(s) | 72, 190, 710, 1504, 2003, 2373, 2964, 3993, 5138 |
| TatI | WGTACW | 8 cut(s) | 688, 1869, 2133, 2724, 3559, 4459, 4835, 5222 |
| TseFI | GTSAC | 5 cut(s) | 575, 3657, 3954, 4480, 4623 |
| Tsp45I | GTSAC | 5 cut(s) | 575, 3657, 3954, 4480, 4623 |
| TspGWI | ACGGA | 3 cut(s) | 1319, 2557, 4979 |
| Tth111I | GACNNNGTC | 1 cut(s) | 882 |
| VpaK11BI | GGWCC | 3 cut(s) | 2505, 3096, 4275 |
| XbaI | TCTAGA | 4 cut(s) | 889, 1430, 2407, 2998 |
| XceI | RCATGY | 6 cut(s) | 145, 695, 1773, 2016, 3415, 4732 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 4123, 5606 |
| XmiI | GTMKAC | 2 cut(s) | 1408, 5090 |
| XmnI | GAANNNNTTC | 7 cut(s) | 1293, 1491, 2352, 2595, 2614, 2943, 6052 |
| ZraI | GACGTC | 1 cut(s) | 70 |
| ZrmI | AGTACT | 1 cut(s) | 4461 |
| Zsp2I | ATGCAT | 4 cut(s) | 595, 2873, 4231, 6160 |