Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003663

Physical Location & Seq

Genomic Coordinates Reverse (-)

42682811 .. 42688732

Gene Structure 5922 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0254100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGACGATGAATGAGCGGAAGACCATTGATTTGGATCAAGGATGGGAGTTTATGCAGAAGGGGATCACAAAGCTCAAAAACATTCTAGAAGGATTGCCGGAGCCTCAGTTCAGCTCCGAGGACTACATGATGCTCTACACAACGATATATAATATGTGCACTCAGAAGCCGCCGCATGACTATTCGCAACAGCTCTACGACAAGTACAAGGAGTCTTTCGAAGAGTACATTAGTTCCATGGTTTTGCCATCTTTGCGAGAGAAGCATGATGAGTTCATGCTAAGAGAGCTGGTGAAAAGGTGGGCAAACCATAAGATCATGGTTAGGTGGCTCTCCCGTTTCTTTCACTATCTTGATCGCTACTTTATAGCTCGGAGGTCACTTCCACCCCTGAATGAAGTTGGACTTACTTGCTTTCGAGATCTTGTCTACCAAGAATTAAATGCGAAAGTGAGAGATGCTGTAATCTCTCTGATTGATCAAGAACGGGAAGGAGAACAGATTGACAGAGCTCTGTTGAAAAATGTGCTGGATATATTTGTTGAGATTGGCATGGGGCAAATGGACCACTATGACAATGACTTTGAGGCAGCGATGCTTAAAGACACTGCGGCCTATTATTCTCGGAAAGCTTCCAATTGGATCTTAGAAGATTCTTGTCCAGATTATATGCTAAAGGCAGAGGAATGTTTAAGGAGGGAGAAAGATAGAGTTGCTCATTACTTACACTCCAGTAGTGAGCCTAAGCTACTTGAGAAAGTTCAACATGAGCTATTGTCTGTATATGCAACTCAGCTTCTGGAGAAAGAGCACTCTGGATGCCATGCACTGCTTCGAGATGATAAGGTGGATGATTTGTCTAGAATGTTCAGGCTCTTTTCTAAGATACCTCGAGGATTGGATCCAGTTTCAAGTATATTCAAGCAGCATGTTACTGCTGAAGGAACAGCCTTAGTCAAACAAGCTGAAGATGCAGCAAGCAACAAGAAGGCAGATAAAAAGGATGTGGTTGGTCTGCAGGAGCAGGTTTTCGTTAGAAAAGTGATTGAGCTTCATGACAAGTACCTAGCATATGTCAATGATTGTTTCCAAAACCATACCCTTTTCCACAAGGCTCTCAAGGAGGCCTTTGAGATCTTCTGCAACAAGGGTGTTGCTGGAAGCTCTAGTGCAGAACTACTTGCTACTTTCTGTGATAACATTCTTAAGAAAGGTGGTAGTGAGAAATTGAGTGACGAAGCCATTGAGGACACACTCGAGAAGGTAGTAAAGCTGCTGGCTTATATTAGTGACAAAGACCTTTTTGCTGAATTCTACAGGAAAAAGCTTGCTCGACGTCTTCTTTTTGACAAAAGTGCTAATGATGACCATGAGAGATGTATATTGACAAAATTGAAGCAACAATGTGGTGGTCAGTTCACCTCAAAGATGGAGGGGATGGTTACAGATTTGACGTTAGCAAAGGAGAACCAGACCAACTTTGAGGAATACCTCAAAAATAATTCGCAGGCAAATCCTGGGATTGATTTAACAGTTACTGTGTTGACTACCGGCTTCTGGCCAAGCTACAAGTCTTTTGACCTCAACCTTCCAGCTGAGCTGGTTAAGTGTGTTGAGGTTTTCAAGGAATTCTATCAAACGAAGACAAAACATAGAAAGCTTACGTGGATGTATTCTCTGGGTACTTGTAACATAAGTGGGAAATTTGAACCAAAAACCATAGAGCTTATCGTCACGACATATCAGGCTGCAGCTCTGCTGCTATTCAATACCTCAGATCGATTGAGTTACTCGGAGATCATGACTCAATTAAATTTGACTGATGATGATGTTGTTAGACTGCTCCACTCCTTGTCATGTGCCAAGTACAAGATCCTTAACAAGGAGCCAAACACAAAAACCATCTCGCCTACTGATTTCTTTGAATTTAACTCGAAGTTTACTGACAAAATGAGGAGGATCAAGATTCCTCTTCCACCTGTGGATGAGAAGAAAAAGGTAATCGAAGATGTAGACAAGGACAGACGGTATGCCATTGATGCTTCTATTGTGCGTATCATGAAGAGCCGTAAAGTTTTGGGACATCAGCAGTTGGTAATGGAGTGTGTGGAGCAGCTTGGTCGCATGTTCAAGCCGGATTTCAAAGCAATAAAAAAGAGGATTGAAGATTTAATCACAAGAGACTACTTGGAAAGGGATAAAGAGAACCCCAATATGTTTAGGTACTTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndr

Protein Analysis

744

Amino Acids

86.73

Weight (kDa)

6.83

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cullin	PF00888	23 - 489	1.4e-136	Cullin alpha solenoid domain
Cullin_AB	PF26557	514 - 647	6.7e-44	Cullin alpha+beta domain
Cullin_Nedd8	PF10557	674 - 736	1.6e-26	Cullin protein neddylation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003663)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24460 AT1G24460
fragaria_vesca	FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950
malus_domestica	MD13G1107800.v1.1 MD16G1107700.v1.1
prunus_persica	Prupe.1G238600_v2.0.a1
pyrus_communis	pycom01g03020 pycom13g09320 pycom16g09190
rosa_chinensis	RchiOBHm_Chr4g0431991
rosa_laevigata	RLG00000006869
rosa_multiflora	Rmu_co8237653.1_g000001 Rmu_co8348741.1_g000001 Rmu_sc0003919.1_g000022 Rmu_sc0004965.1_g000018
rosa_roxburghii	Rroxscaffold_5G00373540
rosa_rugosa	Rorug04G0254100
rosa_samantha	Rh4AG311400 Rh4BG318500 Rh4CG333800 Rh4DG313400
rosa_wichuraiana	Rw4G027070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1339
AbsI	CCTCGAGG	1 cut(s)	891
Acc36I	ACCTGC	1 cut(s)	1015
AccBSI	CCGCTC	1 cut(s)	16
AccI	GTMKAC	2 cut(s)	429, 2013
AciI	CCGC	4 cut(s)	16, 170, 173, 611
AclWI	GGATC	7 cut(s)	42, 71, 650, 896, 909, 1867, 1967
AcoI	YGGCCR	1 cut(s)	1559
AcsI	RAATTY	5 cut(s)	1310, 1628, 1703, 1813, 1925
AcuI	CTGAAG	2 cut(s)	960, 987
AcyI	GRCGYC	1 cut(s)	1336
AfaI	GTAC	6 cut(s)	206, 227, 1064, 1684, 1868, 2225
AfiI	CCNNNNNNNGG	2 cut(s)	1557, 1882
AflII	CTTAAG	1 cut(s)	1205
AjnI	CCWGG	1 cut(s)	1516
AloI	GAACNNNNNNTCC	2 cut(s)	92, 124
Alw21I	GWGCWC	3 cut(s)	161, 514, 813
Alw26I	GTCTC	1 cut(s)	2175
Alw44I	GTGCAC	1 cut(s)	157
AlwI	GGATC	7 cut(s)	42, 71, 650, 896, 909, 1867, 1967
AlwNI	CAGNNNCTG	2 cut(s)	799, 1538
Ama87I	CYCGRG	2 cut(s)	891, 1256
AoxI	GGCC	4 cut(s)	612, 1125, 1559, 2229
ApaLI	GTGCAC	1 cut(s)	157
ApeKI	GCWGC	8 cut(s)	590, 925, 974, 1273, 1748, 1751, 1759, 2113
ApoI	RAATTY	5 cut(s)	1310, 1628, 1703, 1813, 1925
ArsI	GACNNNNNNTTYG	4 cut(s)	13, 45, 566, 598
AspS9I	GGNCC	1 cut(s)	565
AsuHPI	GGTGA	2 cut(s)	304, 1411
AsuII	TTCGAA	1 cut(s)	219
AvaI	CYCGRG	2 cut(s)	891, 1256
AvaII	GGWCC	1 cut(s)	565
BaeGI	GKGCMC	1 cut(s)	161
BalI	TGGCCA	1 cut(s)	1561
BamHI	GGATCC	1 cut(s)	901
BanII	GRGCYC	1 cut(s)	514
BbsI	GAAGAC	3 cut(s)	26, 1331, 1649
Bbv12I	GWGCWC	3 cut(s)	161, 514, 813
BbvI	GCAGC	8 cut(s)	602, 937, 986, 1260, 1735, 1746, 1763, 2125
BccI	CCATC	5 cut(s)	36, 256, 1423, 1432, 1910
BceAI	ACGGC	1 cut(s)	2052
BcgI	CGANNNNNNTGC	2 cut(s)	2102, 2136
BciT130I	CCWGG	1 cut(s)	1518
BclI	TGATCA	1 cut(s)	478
BcoDI	GTCTC	1 cut(s)	2175
BfaI	CTAG	4 cut(s)	86, 861, 1067, 1167
BfmI	CTRYAG	3 cut(s)	1016, 1315, 1749
BfrI	CTTAAG	1 cut(s)	1205
BfuAI	ACCTGC	1 cut(s)	1015
BglII	AGATCT	2 cut(s)	421, 1134
BlpI	GCTNAGC	1 cut(s)	1596
Bme1390I	CCNGG	1 cut(s)	1518
Bme18I	GGWCC	1 cut(s)	565
BmeT110I	CYCGRG	2 cut(s)	891, 1256
BmgT120I	GGNCC	1 cut(s)	565
BmiI	GGNNCC	3 cut(s)	102, 903, 1887
BmrFI	CCNGG	1 cut(s)	1518
BmsI	GCATC	6 cut(s)	120, 448, 585, 809, 961, 2029
BpiI	GAAGAC	3 cut(s)	26, 1331, 1649
BpmI	CTGGAG	2 cut(s)	715, 821
Bpu10I	CCTNAGC	1 cut(s)	744
Bpu1102I	GCTNAGC	1 cut(s)	1596
Bpu14I	TTCGAA	1 cut(s)	219
BpuEI	CTTGAG	2 cut(s)	773, 1103
Bsa29I	ATCGAT	1 cut(s)	1780
BsaAI	YACGTR	1 cut(s)	1665
BsaBI	GATNNNNATC	1 cut(s)	33
BsaHI	GRCGYC	1 cut(s)	1336
BsaJI	CCNNGG	3 cut(s)	117, 237, 1517
BsaXI	ACNNNNNCTCC	4 cut(s)	92, 122, 713, 743
Bsc4I	CCNNNNNNNGG	2 cut(s)	1557, 1882
Bse118I	RCCGGY	1 cut(s)	1550
Bse1I	ACTGG	2 cut(s)	732, 905
Bse8I	GATNNNNATC	1 cut(s)	33
BseBI	CCWGG	1 cut(s)	1518
BseCI	ATCGAT	1 cut(s)	1780
BseDI	CCNNGG	3 cut(s)	117, 237, 1517
BseGI	GGATG	7 cut(s)	47, 824, 856, 1009, 1443, 1674, 1990
BseJI	GATNNNNATC	1 cut(s)	33
BseLI	CCNNNNNNNGG	2 cut(s)	1557, 1882
BseMII	CTCAG	5 cut(s)	119, 176, 806, 1587, 1788
BseNI	ACTGG	2 cut(s)	732, 905
BseRI	GAGGAG	1 cut(s)	1969
BseSI	GKGCMC	1 cut(s)	161
BseXI	GCAGC	8 cut(s)	602, 937, 986, 1260, 1735, 1746, 1763, 2125
BsgI	GTGCAG	1 cut(s)	1191
BshFI	GGCC	4 cut(s)	614, 1127, 1561, 2231
BshVI	ATCGAT	1 cut(s)	1780
BsiHKAI	GWGCWC	3 cut(s)	161, 514, 813
BsiHKCI	CYCGRG	2 cut(s)	891, 1256
BsiSI	CCGG	3 cut(s)	98, 1551, 2135
BslFI	GGGAC	1 cut(s)	2094
BslI	CCNNNNNNNGG	2 cut(s)	1557, 1882
BsmAI	GTCTC	1 cut(s)	2175
BsmFI	GGGAC	1 cut(s)	2094
BsnI	GGCC	4 cut(s)	614, 1127, 1561, 2231
BsoBI	CYCGRG	2 cut(s)	891, 1256
Bsp119I	TTCGAA	1 cut(s)	219
Bsp1286I	GDGCHC	3 cut(s)	161, 514, 813
Bsp1720I	GCTNAGC	1 cut(s)	1596
Bsp19I	CCATGG	1 cut(s)	237
BspACI	CCGC	4 cut(s)	16, 170, 173, 611
BspANI	GGCC	4 cut(s)	614, 1127, 1561, 2231
BspCNI	CTCAG	5 cut(s)	118, 175, 805, 1588, 1787
BspDI	ATCGAT	1 cut(s)	1780
BspHI	TCATGA	3 cut(s)	1054, 1800, 2058
BspLI	GGNNCC	3 cut(s)	102, 903, 1887
BspMAI	CTGCAG	2 cut(s)	1020, 1753
BspMI	ACCTGC	1 cut(s)	1015
BspPI	GGATC	7 cut(s)	42, 71, 650, 896, 909, 1867, 1967
BspQI	GCTCTTC	1 cut(s)	2057
BspT104I	TTCGAA	1 cut(s)	219
BspTI	CTTAAG	1 cut(s)	1205
BsrBI	CCGCTC	1 cut(s)	16
BsrFI	RCCGGY	1 cut(s)	1550
BsrI	ACTGG	2 cut(s)	732, 905
BssAI	RCCGGY	1 cut(s)	1550
BssECI	CCNNGG	3 cut(s)	117, 237, 1517
BssNI	GRCGYC	1 cut(s)	1336
BssT1I	CCWWGG	1 cut(s)	237
Bst2UI	CCWGG	1 cut(s)	1518
Bst4CI	ACNGT	3 cut(s)	1534, 1540, 2028
Bst6I	CTCTTC	3 cut(s)	216, 1977, 2057
BstACI	GRCGYC	1 cut(s)	1336
BstAFI	CTTAAG	1 cut(s)	1205
BstBAI	YACGTR	1 cut(s)	1665
BstBI	TTCGAA	1 cut(s)	219
BstC8I	GCNNGC	4 cut(s)	979, 1278, 1329, 1509
BstDSI	CCRYGG	1 cut(s)	237
BstENI	CCTNNNNNAGG	1 cut(s)	1880
BstF5I	GGATG	7 cut(s)	47, 824, 856, 1009, 1443, 1674, 1990
BstMAI	GTCTC	1 cut(s)	2175
BstMWI	GCNNNNNNNGC	5 cut(s)	253, 262, 286, 971, 2039
BstNI	CCWGG	1 cut(s)	1518
BstNSI	RCATGY	2 cut(s)	932, 2128
BstSCI	CCNGG	1 cut(s)	1516
BstSFI	CTRYAG	3 cut(s)	1016, 1315, 1749
BstSLI	GKGCMC	1 cut(s)	161
BstV1I	GCAGC	8 cut(s)	602, 937, 986, 1260, 1735, 1746, 1763, 2125
BstV2I	GAAGAC	3 cut(s)	26, 1331, 1649
BstX2I	RGATCY	5 cut(s)	421, 642, 901, 1134, 1872
BstXI	CCANNNNNNTGG	1 cut(s)	31
BstYI	RGATCY	5 cut(s)	421, 642, 901, 1134, 1872
Bsu15I	ATCGAT	1 cut(s)	1780
BsuRI	GGCC	4 cut(s)	614, 1127, 1561, 2231
BsuTUI	ATCGAT	1 cut(s)	1780
BtgI	CCRYGG	1 cut(s)	237
BtgZI	GCGATG	1 cut(s)	608
BtsCI	GGATG	7 cut(s)	47, 824, 856, 1009, 1443, 1674, 1990
BtsI	GCAGTG	2 cut(s)	606, 827
BtsIMutI	CAGTG	2 cut(s)	606, 827
BveI	ACCTGC	1 cut(s)	1015
Cac8I	GCNNGC	4 cut(s)	979, 1278, 1329, 1509
CaiI	CAGNNNCTG	2 cut(s)	799, 1538
CciI	TCATGA	3 cut(s)	1054, 1800, 2058
Cfr10I	RCCGGY	1 cut(s)	1550
Cfr13I	GGNCC	1 cut(s)	565
ClaI	ATCGAT	1 cut(s)	1780
Csp6I	GTAC	6 cut(s)	205, 226, 1063, 1683, 1867, 2224
CviQI	GTAC	6 cut(s)	205, 226, 1063, 1683, 1867, 2224
EaeI	YGGCCR	1 cut(s)	1559
Eam1104I	CTCTTC	3 cut(s)	216, 1977, 2057
EarI	CTCTTC	3 cut(s)	216, 1977, 2057
Ecl136II	GAGCTC	1 cut(s)	512
Eco130I	CCWWGG	1 cut(s)	237
Eco147I	AGGCCT	1 cut(s)	1127
Eco24I	GRGCYC	1 cut(s)	514
Eco47I	GGWCC	1 cut(s)	565
Eco53kI	GAGCTC	1 cut(s)	512
Eco57I	CTGAAG	2 cut(s)	960, 987
Eco88I	CYCGRG	2 cut(s)	891, 1256
EcoICRI	GAGCTC	1 cut(s)	512
EcoNI	CCTNNNNNAGG	1 cut(s)	1880
EcoRI	GAATTC	2 cut(s)	1310, 1628
EcoRII	CCWGG	1 cut(s)	1516
EcoT14I	CCWWGG	1 cut(s)	237
EcoT38I	GRGCYC	1 cut(s)	514
ErhI	CCWWGG	1 cut(s)	237
FalI	AAGNNNNNCTT	4 cut(s)	390, 422, 1112, 1144
FaqI	GGGAC	1 cut(s)	2094
FauNDI	CATATG	1 cut(s)	1072
FbaI	TGATCA	1 cut(s)	478
FblI	GTMKAC	2 cut(s)	429, 2013
FokI	GGATG	7 cut(s)	54, 831, 863, 1016, 1450, 1681, 1997
FriOI	GRGCYC	1 cut(s)	514
FspBI	CTAG	4 cut(s)	86, 861, 1067, 1167
GsuI	CTGGAG	2 cut(s)	715, 821
HaeIII	GGCC	4 cut(s)	614, 1127, 1561, 2231
HapII	CCGG	3 cut(s)	98, 1551, 2135
Hin1I	GRCGYC	1 cut(s)	1336
HincII	GTYRAC	1 cut(s)	1545
HindII	GTYRAC	1 cut(s)	1545
HindIII	AAGCTT	3 cut(s)	630, 1325, 1658
HinfI	GANTC	4 cut(s)	212, 653, 1804, 1966
HpaII	CCGG	3 cut(s)	98, 1551, 2135
HphI	GGTGA	2 cut(s)	304, 1411
Hpy166II	GTNNAC	6 cut(s)	159, 430, 1419, 1545, 1941, 2014
Hpy188I	TCNGA	7 cut(s)	118, 165, 375, 474, 627, 1777, 1795
Hpy8I	GTNNAC	6 cut(s)	159, 430, 1419, 1545, 1941, 2014
Hpy99I	CGWCG	1 cut(s)	1338
HpyAV	CCTTC	7 cut(s)	52, 83, 485, 935, 982, 1255, 1598
HpyCH4III	ACNGT	3 cut(s)	1534, 1540, 2028
HpyCH4IV	ACGT	3 cut(s)	1336, 1454, 1664
HpyCH4V	TGCA	9 cut(s)	55, 159, 788, 827, 974, 1018, 1143, 1172, 1751
HpyF10VI	GCNNNNNNNGC	5 cut(s)	253, 262, 286, 971, 2039
HpySE526I	ACGT	3 cut(s)	1336, 1454, 1664
Hsp92I	GRCGYC	1 cut(s)	1336
Ksp22I	TGATCA	1 cut(s)	478
LguI	GCTCTTC	1 cut(s)	2057
LmnI	GCTCC	6 cut(s)	100, 119, 1021, 1848, 1885, 2110
Lsp1109I	GCAGC	8 cut(s)	602, 937, 986, 1260, 1735, 1746, 1763, 2125
LweI	GCATC	6 cut(s)	120, 448, 585, 809, 961, 2029
MaeI	CTAG	4 cut(s)	86, 861, 1067, 1167
MaeII	ACGT	3 cut(s)	1336, 1454, 1664
MaeIII	GTNAC	9 cut(s)	378, 931, 1232, 1289, 1441, 1534, 1688, 1732, 1787
MbiI	CCGCTC	1 cut(s)	16
MfeI	CAATTG	1 cut(s)	637
MflI	RGATCY	5 cut(s)	421, 642, 901, 1134, 1872
MhlI	GDGCHC	3 cut(s)	161, 514, 813
MlsI	TGGCCA	1 cut(s)	1561
MluNI	TGGCCA	1 cut(s)	1561
MlyI	GAGTC	2 cut(s)	221, 1798
MmeI	TCCRAC	1 cut(s)	382
Mox20I	TGGCCA	1 cut(s)	1561
MscI	TGGCCA	1 cut(s)	1561
Msp20I	TGGCCA	1 cut(s)	1561
MspA1I	CMGCKG	1 cut(s)	1595
MspCI	CTTAAG	1 cut(s)	1205
MspI	CCGG	3 cut(s)	98, 1551, 2135
MspR9I	CCNGG	1 cut(s)	1518
MunI	CAATTG	1 cut(s)	637
MvaI	CCWGG	1 cut(s)	1518
MwoI	GCNNNNNNNGC	5 cut(s)	253, 262, 286, 971, 2039
NcoI	CCATGG	1 cut(s)	237
NdeI	CATATG	1 cut(s)	1072
NlaIV	GGNNCC	3 cut(s)	102, 903, 1887
NmuCI	GTSAC	4 cut(s)	378, 1232, 1289, 1732
NspI	RCATGY	2 cut(s)	932, 2128
NspV	TTCGAA	1 cut(s)	219
PaeR7I	CTCGAG	2 cut(s)	891, 1256
PagI	TCATGA	3 cut(s)	1054, 1800, 2058
PceI	AGGCCT	1 cut(s)	1127
PciSI	GCTCTTC	1 cut(s)	2057
PfeI	GAWTC	2 cut(s)	653, 1966
PleI	GAGTC	2 cut(s)	220, 1798
PpsI	GAGTC	2 cut(s)	220, 1798
Ppu21I	YACGTR	1 cut(s)	1665
Psp124BI	GAGCTC	1 cut(s)	514
Psp6I	CCWGG	1 cut(s)	1516
PspGI	CCWGG	1 cut(s)	1516
PspN4I	GGNNCC	3 cut(s)	102, 903, 1887
PspPI	GGNCC	1 cut(s)	565
PspXI	VCTCGAGB	1 cut(s)	891
PstI	CTGCAG	2 cut(s)	1020, 1753
PstNI	CAGNNNCTG	2 cut(s)	799, 1538
PsuI	RGATCY	5 cut(s)	421, 642, 901, 1134, 1872
PvuII	CAGCTG	1 cut(s)	1595
RsaI	GTAC	6 cut(s)	206, 227, 1064, 1684, 1868, 2225
RsaNI	GTAC	6 cut(s)	205, 226, 1063, 1683, 1867, 2224
SacI	GAGCTC	1 cut(s)	514
SapI	GCTCTTC	1 cut(s)	2057
Sau96I	GGNCC	1 cut(s)	565
SchI	GAGTC	2 cut(s)	221, 1798
ScrFI	CCNGG	1 cut(s)	1518
SduI	GDGCHC	3 cut(s)	161, 514, 813
SfaNI	GCATC	6 cut(s)	120, 448, 585, 809, 961, 2029
SfcI	CTRYAG	3 cut(s)	1016, 1315, 1749
Sfr274I	CTCGAG	2 cut(s)	891, 1256
SfuI	TTCGAA	1 cut(s)	219
SinI	GGWCC	1 cut(s)	565
SlaI	CTCGAG	2 cut(s)	891, 1256
SmlI	CTYRAG	5 cut(s)	752, 891, 1118, 1205, 1256
SmoI	CTYRAG	5 cut(s)	752, 891, 1118, 1205, 1256
SseBI	AGGCCT	1 cut(s)	1127
SsiI	CCGC	4 cut(s)	16, 170, 173, 611
SspMI	CTAG	4 cut(s)	86, 861, 1067, 1167
SstI	GAGCTC	1 cut(s)	514
StuI	AGGCCT	1 cut(s)	1127
StyD4I	CCNGG	1 cut(s)	1516
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	3 cut(s)	1534, 1540, 2028
TaiI	ACGT	3 cut(s)	1339, 1457, 1667
TaqI	TCGA	9 cut(s)	219, 418, 835, 892, 1257, 1333, 1780, 1934, 2004
TatI	WGTACW	3 cut(s)	204, 225, 1866
TauI	GCSGC	3 cut(s)	172, 175, 614
TfiI	GAWTC	2 cut(s)	653, 1966
TscAI	CASTG	2 cut(s)	613, 834
TseFI	GTSAC	4 cut(s)	378, 1232, 1289, 1732
TseI	GCWGC	8 cut(s)	590, 925, 974, 1273, 1748, 1751, 1759, 2113
Tsp45I	GTSAC	4 cut(s)	378, 1232, 1289, 1732
TspDTI	ATGAA	5 cut(s)	23, 265, 411, 1043, 2075
TspRI	CASTG	2 cut(s)	613, 834
Vha464I	CTTAAG	1 cut(s)	1205
VneI	GTGCAC	1 cut(s)	157
VpaK11BI	GGWCC	1 cut(s)	565
XagI	CCTNNNNNAGG	1 cut(s)	1880
XapI	RAATTY	5 cut(s)	1310, 1628, 1703, 1813, 1925
XbaI	TCTAGA	2 cut(s)	85, 860
XceI	RCATGY	2 cut(s)	932, 2128
XhoI	CTCGAG	2 cut(s)	891, 1256
XmiI	GTMKAC	2 cut(s)	429, 2013
XspI	CTAG	4 cut(s)	86, 861, 1067, 1167
ZraI	GACGTC	1 cut(s)	1337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.