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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24460 AT1G24460 |
| fragaria_vesca | FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 FvH4_4g24950 |
| malus_domestica | MD13G1107800.v1.1 MD16G1107700.v1.1 |
| prunus_persica | Prupe.1G238600_v2.0.a1 |
| pyrus_communis | pycom01g03020 pycom13g09320 pycom16g09190 |
| rosa_chinensis | RchiOBHm_Chr4g0431991 |
| rosa_laevigata | RLG00000006869 |
| rosa_multiflora | Rmu_co8237653.1_g000001 Rmu_co8348741.1_g000001 Rmu_sc0003919.1_g000022 Rmu_sc0004965.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00373540 |
| rosa_rugosa | Rorug04G0254100 |
| rosa_samantha | Rh4AG311400 Rh4BG318500 Rh4CG333800 Rh4DG313400 |
| rosa_wichuraiana | Rw4G027070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 3931, 4315 |
| AatII | GACGTC | 1 cut(s) | 78 |
| Acc16I | TGCGCA | 1 cut(s) | 6017 |
| Acc36I | ACCTGC | 1 cut(s) | 5725 |
| AccBSI | CCGCTC | 2 cut(s) | 3175, 4872 |
| AccI | GTMKAC | 2 cut(s) | 1414, 5069 |
| AccII | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| AccIII | TCCGGA | 1 cut(s) | 31 |
| AciI | CCGC | 9 cut(s) | 128, 348, 642, 1585, 3175, 3623, 4870, 5064, 5174 |
| AclI | AACGTT | 2 cut(s) | 193, 3969 |
| AclWI | GGATC | 7 cut(s) | 540, 3363, 4008, 4377, 5148, 5974, 6056 |
| AcoI | YGGCCR | 2 cut(s) | 22, 5061 |
| AcuI | CTGAAG | 9 cut(s) | 188, 1238, 1314, 1896, 2160, 2724, 3669, 4191, 6111 |
| AcyI | GRCGYC | 2 cut(s) | 75, 6243 |
| AdeI | CACNNNGTG | 1 cut(s) | 4679 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 31, 335, 592, 785, 6158 |
| AflIII | ACRYGT | 5 cut(s) | 147, 697, 1775, 2018, 3390 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 130, 5692 |
| AhlI | ACTAGT | 2 cut(s) | 215, 691 |
| AjnI | CCWGG | 4 cut(s) | 494, 3726, 4225, 5895 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3002, 3034 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 134, 166 |
| Alw21I | GWGCWC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| AlwI | GGATC | 7 cut(s) | 540, 3363, 4008, 4377, 5148, 5974, 6056 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2264, 2828 |
| Aor13HI | TCCGGA | 1 cut(s) | 31 |
| AoxI | GGCC | 5 cut(s) | 22, 492, 3963, 5061, 6112 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 1299, 2358, 2595, 2614, 2922, 5113, 6031 |
| AspLEI | GCGC | 2 cut(s) | 4590, 6018 |
| AspS9I | GGNCC | 3 cut(s) | 2511, 3075, 4254 |
| AsuC2I | CCSGG | 2 cut(s) | 739, 787 |
| AsuII | TTCGAA | 3 cut(s) | 56, 153, 295 |
| AsuNHI | GCTAGC | 1 cut(s) | 3731 |
| AvaII | GGWCC | 3 cut(s) | 2511, 3075, 4254 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1272, 1305, 3475, 3508 |
| BanII | GRGCYC | 4 cut(s) | 510, 855, 1805, 4266 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1311, 1343, 1446, 1478, 3876, 3908 |
| BbsI | GAAGAC | 5 cut(s) | 884, 2166, 2730, 4568, 5325 |
| Bbv12I | GWGCWC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| BbvCI | CCTCAGC | 2 cut(s) | 3507, 4518 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3734, 3768, 5678, 5712 |
| BciT130I | CCWGG | 4 cut(s) | 496, 3728, 4227, 5897 |
| BciVI | GTATCC | 2 cut(s) | 205, 3476 |
| BclI | TGATCA | 3 cut(s) | 319, 793, 4270 |
| BcnI | CCSGG | 2 cut(s) | 739, 787 |
| BcuI | ACTAGT | 2 cut(s) | 215, 691 |
| BfmI | CTRYAG | 8 cut(s) | 42, 48, 399, 2516, 3080, 3753, 3852, 5516 |
| BfuAI | ACCTGC | 1 cut(s) | 5725 |
| BfuI | GTATCC | 2 cut(s) | 205, 3476 |
| BlpI | GCTNAGC | 3 cut(s) | 4029, 4419, 5880 |
| BmcAI | AGTACT | 1 cut(s) | 4440 |
| Bme1390I | CCNGG | 6 cut(s) | 496, 739, 787, 3728, 4227, 5897 |
| Bme18I | GGWCC | 3 cut(s) | 2511, 3075, 4254 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 130, 5692 |
| BmgT120I | GGNCC | 3 cut(s) | 2511, 3075, 4254 |
| BmiI | GGNNCC | 5 cut(s) | 2512, 2513, 3076, 3077, 6034 |
| BmrFI | CCNGG | 6 cut(s) | 496, 739, 787, 3728, 4227, 5897 |
| BmtI | GCTAGC | 1 cut(s) | 3735 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5716 |
| BpiI | GAAGAC | 5 cut(s) | 884, 2166, 2730, 4568, 5325 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1721, 1753, 1964, 1996 |
| BpmI | CTGGAG | 5 cut(s) | 1013, 1305, 1731, 3398, 4463 |
| Bpu10I | CCTNAGC | 6 cut(s) | 305, 638, 3227, 3507, 4518, 5781 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 4029, 4419, 5880 |
| Bpu14I | TTCGAA | 3 cut(s) | 56, 153, 295 |
| BpuEI | CTTGAG | 7 cut(s) | 869, 1139, 1343, 1434, 4778, 4907, 5850 |
| BpuMI | CCSGG | 2 cut(s) | 739, 787 |
| Bsa29I | ATCGAT | 2 cut(s) | 5457, 6060 |
| BsaAI | YACGTR | 2 cut(s) | 2377, 2941 |
| BsaBI | GATNNNNATC | 3 cut(s) | 4368, 5378, 6060 |
| BsaHI | GRCGYC | 2 cut(s) | 75, 6243 |
| BsaI | GGTCTC | 5 cut(s) | 317, 554, 776, 4386, 4931 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 134, 164, 464, 494, 4851, 4881 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 31, 335, 592, 785, 6158 |
| Bse118I | RCCGGY | 1 cut(s) | 85 |
| Bse3DI | GCAATG | 3 cut(s) | 1095, 1755, 6246 |
| Bse8I | GATNNNNATC | 3 cut(s) | 4368, 5378, 6060 |
| BseAI | TCCGGA | 1 cut(s) | 31 |
| BseBI | CCWGG | 4 cut(s) | 496, 3728, 4227, 5897 |
| BseCI | ATCGAT | 2 cut(s) | 5457, 6060 |
| BseJI | GATNNNNATC | 3 cut(s) | 4368, 5378, 6060 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 31, 335, 592, 785, 6158 |
| BseMI | GCAATG | 3 cut(s) | 1095, 1755, 6246 |
| BseRI | GAGGAG | 4 cut(s) | 2435, 2999, 4190, 5579 |
| BsgI | GTGCAG | 2 cut(s) | 1067, 4551 |
| Bsh1236I | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| BshFI | GGCC | 5 cut(s) | 24, 494, 3965, 5063, 6114 |
| BshVI | ATCGAT | 2 cut(s) | 5457, 6060 |
| BsiHKAI | GWGCWC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| BsiSI | CCGG | 5 cut(s) | 21, 32, 86, 739, 786 |
| BslFI | GGGAC | 4 cut(s) | 2497, 3061, 3287, 5724 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 31, 335, 592, 785, 6158 |
| BsmBI | CGTCTC | 1 cut(s) | 5679 |
| BsmFI | GGGAC | 4 cut(s) | 2497, 3061, 3287, 5724 |
| BsmI | GAATGC | 7 cut(s) | 64, 967, 1924, 2850, 3118, 3272, 3309 |
| BsnI | GGCC | 5 cut(s) | 24, 494, 3965, 5063, 6114 |
| Bso31I | GGTCTC | 5 cut(s) | 317, 554, 776, 4386, 4931 |
| Bsp119I | TTCGAA | 3 cut(s) | 56, 153, 295 |
| Bsp1286I | GDGCHC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| Bsp13I | TCCGGA | 1 cut(s) | 31 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 4029, 4419, 5880 |
| Bsp19I | CCATGG | 1 cut(s) | 3138 |
| Bsp68I | TCGCGA | 1 cut(s) | 1467 |
| BspACI | CCGC | 9 cut(s) | 128, 348, 642, 1585, 3175, 3623, 4870, 5064, 5174 |
| BspANI | GGCC | 5 cut(s) | 24, 494, 3965, 5063, 6114 |
| BspDI | ATCGAT | 2 cut(s) | 5457, 6060 |
| BspEI | TCCGGA | 1 cut(s) | 31 |
| BspFNI | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| BspHI | TCATGA | 1 cut(s) | 3499 |
| BspLI | GGNNCC | 5 cut(s) | 2512, 2513, 3076, 3077, 6034 |
| BspMAI | CTGCAG | 5 cut(s) | 46, 52, 403, 3757, 3856 |
| BspMI | ACCTGC | 1 cut(s) | 5725 |
| BspOI | GCTAGC | 1 cut(s) | 3735 |
| BspPI | GGATC | 7 cut(s) | 540, 3363, 4008, 4377, 5148, 5974, 6056 |
| BspQI | GCTCTTC | 3 cut(s) | 5, 1290, 5505 |
| BspT104I | TTCGAA | 3 cut(s) | 56, 153, 295 |
| BspTNI | GGTCTC | 5 cut(s) | 317, 554, 776, 4386, 4931 |
| BsrBI | CCGCTC | 2 cut(s) | 3175, 4872 |
| BsrDI | GCAATG | 3 cut(s) | 1095, 1755, 6246 |
| BsrFI | RCCGGY | 1 cut(s) | 85 |
| BssAI | RCCGGY | 1 cut(s) | 85 |
| BssNI | GRCGYC | 2 cut(s) | 75, 6243 |
| BssT1I | CCWWGG | 4 cut(s) | 1527, 3138, 5838, 6227 |
| Bst2UI | CCWGG | 4 cut(s) | 496, 3728, 4227, 5897 |
| BstACI | GRCGYC | 2 cut(s) | 75, 6243 |
| BstBAI | YACGTR | 2 cut(s) | 2377, 2941 |
| BstBI | TTCGAA | 3 cut(s) | 56, 153, 295 |
| BstDSI | CCRYGG | 4 cut(s) | 422, 2568, 3138, 4941 |
| BstFNI | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| BstHHI | GCGC | 2 cut(s) | 4590, 6018 |
| BstNI | CCWGG | 4 cut(s) | 496, 3728, 4227, 5897 |
| BstNSI | RCATGY | 6 cut(s) | 151, 701, 1779, 2022, 3394, 4711 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5716 |
| BstSCI | CCNGG | 6 cut(s) | 494, 737, 785, 3726, 4225, 5895 |
| BstSFI | CTRYAG | 8 cut(s) | 42, 48, 399, 2516, 3080, 3753, 3852, 5516 |
| BstSNI | TACGTA | 2 cut(s) | 2377, 2941 |
| BstUI | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| BstV2I | GAAGAC | 5 cut(s) | 884, 2166, 2730, 4568, 5325 |
| BstX2I | RGATCY | 3 cut(s) | 4013, 4369, 5140 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1534 |
| BstYI | RGATCY | 3 cut(s) | 4013, 4369, 5140 |
| Bsu15I | ATCGAT | 2 cut(s) | 5457, 6060 |
| BsuI | GTATCC | 2 cut(s) | 205, 3476 |
| BsuRI | GGCC | 5 cut(s) | 24, 494, 3965, 5063, 6114 |
| BsuTUI | ATCGAT | 2 cut(s) | 5457, 6060 |
| BtgI | CCRYGG | 4 cut(s) | 422, 2568, 3138, 4941 |
| BtsI | GCAGTG | 8 cut(s) | 408, 1217, 2053, 2262, 2317, 2826, 2881, 3849 |
| BtuMI | TCGCGA | 1 cut(s) | 1467 |
| BveI | ACCTGC | 1 cut(s) | 5725 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2264, 2828 |
| CciI | TCATGA | 1 cut(s) | 3499 |
| CfoI | GCGC | 2 cut(s) | 4590, 6018 |
| Cfr10I | RCCGGY | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 3 cut(s) | 2511, 3075, 4254 |
| ClaI | ATCGAT | 2 cut(s) | 5457, 6060 |
| CseI | GACGC | 7 cut(s) | 134, 1889, 2153, 2717, 5055, 5221, 6232 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1750, 1785, 2257, 2292, 5040, 5075 |
| DraI | TTTAAA | 1 cut(s) | 4720 |
| DraIII | CACNNNGTG | 1 cut(s) | 4679 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 3931, 4315 |
| DriI | GACNNNNNGTC | 2 cut(s) | 130, 5692 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 3931, 4315 |
| EaeI | YGGCCR | 2 cut(s) | 22, 5061 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 130, 5692 |
| EciI | GGCGGA | 2 cut(s) | 3638, 5189 |
| Ecl136II | GAGCTC | 4 cut(s) | 508, 853, 1803, 4264 |
| Eco105I | TACGTA | 2 cut(s) | 2377, 2941 |
| Eco130I | CCWWGG | 4 cut(s) | 1527, 3138, 5838, 6227 |
| Eco24I | GRGCYC | 4 cut(s) | 510, 855, 1805, 4266 |
| Eco31I | GGTCTC | 5 cut(s) | 317, 554, 776, 4386, 4931 |
| Eco32I | GATATC | 4 cut(s) | 172, 5946, 5988, 6058 |
| Eco47I | GGWCC | 3 cut(s) | 2511, 3075, 4254 |
| Eco53kI | GAGCTC | 4 cut(s) | 508, 853, 1803, 4264 |
| Eco57I | CTGAAG | 9 cut(s) | 188, 1238, 1314, 1896, 2160, 2724, 3669, 4191, 6111 |
| EcoICRI | GAGCTC | 4 cut(s) | 508, 853, 1803, 4264 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2511, 3075 |
| EcoRI | GAATTC | 2 cut(s) | 297, 1376 |
| EcoRII | CCWGG | 4 cut(s) | 494, 3726, 4225, 5895 |
| EcoRV | GATATC | 4 cut(s) | 172, 5946, 5988, 6058 |
| EcoT14I | CCWWGG | 4 cut(s) | 1527, 3138, 5838, 6227 |
| EcoT22I | ATGCAT | 4 cut(s) | 601, 2852, 4210, 6139 |
| EcoT38I | GRGCYC | 4 cut(s) | 510, 855, 1805, 4266 |
| ErhI | CCWWGG | 4 cut(s) | 1527, 3138, 5838, 6227 |
| Esp3I | CGTCTC | 1 cut(s) | 5679 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1215, 1247, 3315, 3347, 3933, 3965, 5429, 5461 |
| FaqI | GGGAC | 4 cut(s) | 2497, 3061, 3287, 5724 |
| FauI | CCCGC | 3 cut(s) | 121, 1578, 3168 |
| FauNDI | CATATG | 1 cut(s) | 4456 |
| FbaI | TGATCA | 3 cut(s) | 319, 793, 4270 |
| FblI | GTMKAC | 2 cut(s) | 1414, 5069 |
| FriOI | GRGCYC | 4 cut(s) | 510, 855, 1805, 4266 |
| FspAI | RTGCGCAY | 1 cut(s) | 6017 |
| FspI | TGCGCA | 1 cut(s) | 6017 |
| GlaI | GCGC | 2 cut(s) | 4589, 6017 |
| GsuI | CTGGAG | 5 cut(s) | 1013, 1305, 1731, 3398, 4463 |
| HaeIII | GGCC | 5 cut(s) | 24, 494, 3965, 5063, 6114 |
| HapII | CCGG | 5 cut(s) | 21, 32, 86, 739, 786 |
| HgaI | GACGC | 7 cut(s) | 134, 1889, 2153, 2717, 5055, 5221, 6232 |
| HhaI | GCGC | 2 cut(s) | 4590, 6018 |
| Hin1I | GRCGYC | 2 cut(s) | 75, 6243 |
| Hin6I | GCGC | 2 cut(s) | 4588, 6016 |
| HinP1I | GCGC | 2 cut(s) | 4588, 6016 |
| HincII | GTYRAC | 6 cut(s) | 460, 656, 1560, 2067, 4504, 5523 |
| HindII | GTYRAC | 6 cut(s) | 460, 656, 1560, 2067, 4504, 5523 |
| HindIII | AAGCTT | 3 cut(s) | 1031, 4073, 5025 |
| HpaI | GTTAAC | 2 cut(s) | 460, 1560 |
| HpaII | CCGG | 5 cut(s) | 21, 32, 86, 739, 786 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 80, 170 |
| HpyCH4IV | ACGT | 6 cut(s) | 75, 193, 2006, 2376, 2940, 3969 |
| HpySE526I | ACGT | 6 cut(s) | 75, 193, 2006, 2376, 2940, 3969 |
| Hsp92I | GRCGYC | 2 cut(s) | 75, 6243 |
| HspAI | GCGC | 2 cut(s) | 4588, 6016 |
| KflI | GGGWCCC | 2 cut(s) | 2511, 3075 |
| Kpn2I | TCCGGA | 1 cut(s) | 31 |
| Ksp22I | TGATCA | 3 cut(s) | 319, 793, 4270 |
| KspAI | GTTAAC | 2 cut(s) | 460, 1560 |
| LguI | GCTCTTC | 3 cut(s) | 5, 1290, 5505 |
| LmnI | GCTCC | 7 cut(s) | 988, 994, 1897, 2344, 2908, 4922, 5904 |
| MaeII | ACGT | 6 cut(s) | 75, 193, 2006, 2376, 2940, 3969 |
| MbiI | CCGCTC | 2 cut(s) | 3175, 4872 |
| MfeI | CAATTG | 3 cut(s) | 3423, 5073, 6051 |
| MflI | RGATCY | 3 cut(s) | 4013, 4369, 5140 |
| MhlI | GDGCHC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| Mph1103I | ATGCAT | 4 cut(s) | 601, 2852, 4210, 6139 |
| MroI | TCCGGA | 1 cut(s) | 31 |
| MroXI | GAANNNNTTC | 7 cut(s) | 1299, 2358, 2595, 2614, 2922, 5113, 6031 |
| MslI | CAYNNNNRTG | 2 cut(s) | 716, 740 |
| MspA1I | CMGCKG | 5 cut(s) | 47, 208, 1577, 2084, 2648 |
| MspI | CCGG | 5 cut(s) | 21, 32, 86, 739, 786 |
| MspR9I | CCNGG | 6 cut(s) | 496, 739, 787, 3728, 4227, 5897 |
| MunI | CAATTG | 3 cut(s) | 3423, 5073, 6051 |
| Mva1269I | GAATGC | 7 cut(s) | 64, 967, 1924, 2850, 3118, 3272, 3309 |
| MvaI | CCWGG | 4 cut(s) | 496, 3728, 4227, 5897 |
| MvnI | CGCG | 4 cut(s) | 128, 1467, 4590, 5066 |
| NciI | CCSGG | 2 cut(s) | 739, 787 |
| NcoI | CCATGG | 1 cut(s) | 3138 |
| NdeI | CATATG | 1 cut(s) | 4456 |
| NheI | GCTAGC | 1 cut(s) | 3731 |
| NlaIV | GGNNCC | 5 cut(s) | 2512, 2513, 3076, 3077, 6034 |
| NmuCI | GTSAC | 5 cut(s) | 581, 3636, 3933, 4459, 4602 |
| NruI | TCGCGA | 1 cut(s) | 1467 |
| NsbI | TGCGCA | 1 cut(s) | 6017 |
| NsiI | ATGCAT | 4 cut(s) | 601, 2852, 4210, 6139 |
| NspI | RCATGY | 6 cut(s) | 151, 701, 1779, 2022, 3394, 4711 |
| NspV | TTCGAA | 3 cut(s) | 56, 153, 295 |
| PagI | TCATGA | 1 cut(s) | 3499 |
| PciI | ACATGT | 5 cut(s) | 147, 697, 1775, 2018, 3390 |
| PciSI | GCTCTTC | 3 cut(s) | 5, 1290, 5505 |
| PctI | GAATGC | 7 cut(s) | 64, 967, 1924, 2850, 3118, 3272, 3309 |
| PdmI | GAANNNNTTC | 7 cut(s) | 1299, 2358, 2595, 2614, 2922, 5113, 6031 |
| PflFI | GACNNNGTC | 1 cut(s) | 888 |
| PfoI | TCCNGGA | 1 cut(s) | 5895 |
| Ppu21I | YACGTR | 2 cut(s) | 2377, 2941 |
| PpuMI | RGGWCCY | 2 cut(s) | 2511, 3075 |
| PscI | ACATGT | 5 cut(s) | 147, 697, 1775, 2018, 3390 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5716 |
| Psp124BI | GAGCTC | 4 cut(s) | 510, 855, 1805, 4266 |
| Psp1406I | AACGTT | 2 cut(s) | 193, 3969 |
| Psp5II | RGGWCCY | 2 cut(s) | 2511, 3075 |
| Psp6I | CCWGG | 4 cut(s) | 494, 3726, 4225, 5895 |
| PspGI | CCWGG | 4 cut(s) | 494, 3726, 4225, 5895 |
| PspN4I | GGNNCC | 5 cut(s) | 2512, 2513, 3076, 3077, 6034 |
| PspPI | GGNCC | 3 cut(s) | 2511, 3075, 4254 |
| PspPPI | RGGWCCY | 2 cut(s) | 2511, 3075 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3357, 3389 |
| PstI | CTGCAG | 5 cut(s) | 46, 52, 403, 3757, 3856 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2264, 2828 |
| PsuI | RGATCY | 3 cut(s) | 4013, 4369, 5140 |
| PsyI | GACNNNGTC | 1 cut(s) | 888 |
| PvuII | CAGCTG | 5 cut(s) | 47, 208, 1577, 2084, 2648 |
| RruI | TCGCGA | 1 cut(s) | 1467 |
| RseI | CAYNNNNRTG | 2 cut(s) | 716, 740 |
| SacI | GAGCTC | 4 cut(s) | 510, 855, 1805, 4266 |
| SapI | GCTCTTC | 3 cut(s) | 5, 1290, 5505 |
| Sau96I | GGNCC | 3 cut(s) | 2511, 3075, 4254 |
| ScaI | AGTACT | 1 cut(s) | 4440 |
| ScrFI | CCNGG | 6 cut(s) | 496, 739, 787, 3728, 4227, 5897 |
| SduI | GDGCHC | 6 cut(s) | 510, 855, 1159, 1805, 4266, 4707 |
| SfcI | CTRYAG | 8 cut(s) | 42, 48, 399, 2516, 3080, 3753, 3852, 5516 |
| SfuI | TTCGAA | 3 cut(s) | 56, 153, 295 |
| SgrAI | CRCCGGYG | 1 cut(s) | 85 |
| SinI | GGWCC | 3 cut(s) | 2511, 3075, 4254 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 716, 740 |
| SmlI | CTYRAG | 7 cut(s) | 848, 1118, 1358, 1449, 4793, 4886, 5865 |
| SmoI | CTYRAG | 7 cut(s) | 848, 1118, 1358, 1449, 4793, 4886, 5865 |
| SnaBI | TACGTA | 2 cut(s) | 2377, 2941 |
| SpeI | ACTAGT | 2 cut(s) | 215, 691 |
| SsiI | CCGC | 9 cut(s) | 128, 348, 642, 1585, 3175, 3623, 4870, 5064, 5174 |
| SspI | AATATT | 5 cut(s) | 1549, 2410, 2974, 4492, 5464 |
| SstI | GAGCTC | 4 cut(s) | 510, 855, 1805, 4266 |
| StyD4I | CCNGG | 6 cut(s) | 494, 737, 785, 3726, 4225, 5895 |
| StyI | CCWWGG | 4 cut(s) | 1527, 3138, 5838, 6227 |
| TaiI | ACGT | 6 cut(s) | 78, 196, 2009, 2379, 2943, 3972 |
| TatI | WGTACW | 7 cut(s) | 694, 1875, 2139, 2703, 3538, 4438, 4814 |
| TauI | GCSGC | 1 cut(s) | 5066 |
| TseFI | GTSAC | 5 cut(s) | 581, 3636, 3933, 4459, 4602 |
| Tsp45I | GTSAC | 5 cut(s) | 581, 3636, 3933, 4459, 4602 |
| TspGWI | ACGGA | 4 cut(s) | 1325, 2557, 4246, 4958 |
| Tth111I | GACNNNGTC | 1 cut(s) | 888 |
| VpaK11BI | GGWCC | 3 cut(s) | 2511, 3075, 4254 |
| XbaI | TCTAGA | 3 cut(s) | 895, 2413, 2977 |
| XceI | RCATGY | 6 cut(s) | 151, 701, 1779, 2022, 3394, 4711 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 4102, 5585 |
| XmiI | GTMKAC | 2 cut(s) | 1414, 5069 |
| XmnI | GAANNNNTTC | 7 cut(s) | 1299, 2358, 2595, 2614, 2922, 5113, 6031 |
| ZraI | GACGTC | 1 cut(s) | 76 |
| ZrmI | AGTACT | 1 cut(s) | 4440 |
| Zsp2I | ATGCAT | 4 cut(s) | 601, 2852, 4210, 6139 |