Rh4AG311400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0003663
Physical Location & Seq
Forward (+)
62223899 .. 62234697
10799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG311400.1

Sequence Viewer

Length: 7227 bp
ATGTCTGAGAAGAGCGATTCCGGCCAGCTTCCGGACGGTGCTGCAGCTGCAGATTCGGATGCGATTTGGAACGACGTCGTTTCACCGGTGAACAAAACCGAGGAATTGGGGAAAGTGTTGGAGGACGCAGGGTCAGGGAAGGAGGACATGTTCGAAGATTGCCCCGACGATATCTTGGTGGATGAGGTCGAACGTTTACGACTTCAGCTGGATACTAGTATTGCAGAGAAAGATGACTTTGCTCGCAAATTTAAGGAAGAGAGAGAGTCTTTTGTTAGAGAAGTTGGCACTCTTCGAATTCAGCTTAGGGGTCTCACTGATCAACAGCCATTGGTGGGTGAAAATGGCGGTGATTTTTGTAATAATGAGGCTGAAAGTGGAGAGAATGGAGAAAAGACTGCTGTGGTGGACAAGGGTACACCGTGGATTGACTTGATAAAGGAGTGTTCTGGGTTTGTTAAGAAGGCGTTGGAGAAACAGTCTCAGATTGAGGCCAGGGTGAGAGAGCTCGATGGAATTGTGTATATGAAGGATCAAGAAATCGAGGGTCTCAATGCCAATGTGAAAGTTTTATATGAGAGTCACCATGAGAAGGATGCATATTTTGAAGCTCTGGCAAATAGGATGTTGGCTTCCCTTAGCCGTGTAGTTGGTCAACAAGAACTGCTGGATGATTCTATTGGTGGAAAACTAGTACATGTTGAGAATGGCACGTCTATGTTAGTTGAGAATTTCACCCGGATGCTTTCTGAAATTGAACATTTCAGACAGTGTTTGCCTGAGACCGGGTTTGATCATAGTTCGCAGGAGGTGGGGGGCATTTTTGCTGCTGCTCGTAATGAGTTACTTGAGCTCAGAAGAAAGGAAGCCGAATTTGTTGAAAGACTGAGTCTTCTAGAAGATTCAAATAGGAAATTGGTTGAAGAACTAGACAATCAGAGAGCGATAGCTGAAAGGCTGAATGCAGAACTTGGACAAACAAAAATGGAGCTGGAGCAGGAGAAGAATAGGTGTGCTAATACTAGAGAGAAGCTTACTATCGCTGTGCAGAAAGGCAAGGGATTGGTACATCAAAGAGACTCATTGAAGCAGTCCATTGCTGAAAAACTGAGTGAGCTTGAGAAGTGTCGGACTGAATTGCAGGAGAAGTCAAGTGCTCTTGAAGCTGCTGAATTAAGCAAGGAGGAATTGATTAGGAGTGAAAACTCAGTTGCATCACTGCAAGAAACACTTTCCCAAAATAATGTAATTCTTCAGAAACTTGAAGAAATGTTGTCTCAGACTGGTGTACCTGAAGAGCTTCAATCTATGGATATTGTAGAGAGACTTCGATGGCTTGTGGATGAAAGTGTTAAACTCAAGGAAATTTCTATGGAATTCCAAACCTTGAAAGATGCTATGTATGCTATTGGTCTACCAGAAGTTATTTCCTCTTCTAGTTTGGAATCTCAAGTAAGTTGGCTTCGGGAATCATATTCTCAGGCGAATGAGGAAGTGCTTGTGCTACGTAATGAAATTACTGCAACTAAGGAAGTGGCACATAAAAATATTGACCAGTTAACTGAATCACTTTCAGCTGAATTGCGGGCAAAAGAACATCTCCAAGCAGAGTTGGACAACATAACATCGGAATACAATGAGATTATCAAGAAAGAGCATCAAGTGTCTTTAGAGAAAGCTCAGATGGTCAGAAGGTTACTTGATGTGTCTGGAGTTGTAATGGACAATGAGGATGTCTCTCAACTTTCCTCAGACATTGCCACGCTCATTGACACATGTATTGAGAAGATAAAAGAACAGAGCTCTGCTTCACTTTCGGCTGAAATGCAGGCAAAGGAAGTTCTCCAAGTGGAGTTAGACAGTCTCACATCAAAGTACAAAGAGATGGTTGAAAAGGAGCGTCAAGTATCTTCAGAGAATGCTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAATGAGGATGTCTCTCAGCTTTCCTCAGACATTGGCACGTTCATTGACACATGTATTGGGAAGATAAAAGAACAGAGCAGTGCTTCATTTGAACAGTCAACTGCTTCGCTTTCAGCTGAAATGCAAGCAAAGGAATATCTCCAAGTAGAGTTGGAGAGTCTAACATCAAAGTACAAAGCGATTGTTGAGAAAGAGCGTCAAGTGTCTGCAGAGAAGGCTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAATGAAGATGTCTCTCAGCTTTCCTCAGACACTGCCACGCTCATTGATAGATGCATTCAGAAGATAAAAGAACAGAGCAGTGCCTCACTAGATTCTCCAAGTTTCGATGTGGAGCTATTTGAAACAATTCAAAGCCACTTGTACGTAAGAGATCAGGAGTTGATGCTCTGTCGGAATATTCTAGAAGAGGAGATGGTGGTGAAATCAGAGGTGAATAAACTGTCGGAGGAATTACGAATTGTGTCTCAACAAGTTGAGGCATTGAAGGAGGAAAAAGGGTCCCTACAGAGAGATATTGTACGGTCAGAACAGGAGAATGCTATGATAAGGGAGAAGTTATCCGTGGCAGTCAAGGAAGGTAAGGAAATGGTTCAAGAGCGGGGAAATGCTTCATTTGAACAGTTAACTGCTTCTCTTTCAGCTGAAATGCAGGCAAAGGAATATCTCCAAGTAGAGTTGGAGAGTCTAACATTGAAGTACAAAGAGATTGTTGAGAAAGAGCGTCAAGTGTCTTCAGAGAAGGCTGAGATGGTCAAAATGTTACTTGATGTCTCTGGAATTGTGATTGACAATGAAGATGTCTCTCAGCTTTCCTCAGACACTGCCACGCTCATTGATAGATGCATTCAGAAGATAAAAGAACAGAGCAGTGCCTCACTTGATTCTCCAAGTTTCGATGTGGAGCTATTTGAAACAATTCAAAGCCACTTGTACATAAGAGATCAGGAGTTGATGCTCTGTCAGAATATTCTAGAAGAGGAGATGGTGGTGAAATCAGAGGTGAATAAACTGTCGGAGGAATTACGAATTGTGTCTCAACAAGTTGAGGCATTGAAGGAGGAAAAAGGGTCCCTACAGAGAGATATTGAACGGTCAGAAGAGAAAAATGCTATGATAAGGGAGAAGTTATCCATGGCAGTCAAGAAAGGTAAGGGAATGGTTCAAGAGCGGGAAAACTTGAAACTTCGTGTGGAAGAAAAGAACTCGGAGATTGAGAAGCTAAGGCTTGAGTTACAGCAGGAACAATCCACCCTGTCTGAATGCAGGGACAAGATAAATAGCTTGTCTGCTGATACAGACTGCATTCCAAAGTTAGAAGCTGATCTTGTTGCTATGAAGGAACAAAGGGATCAACTCGAACAGTTCTTACTGGAGAGCAATAGCATGTTACAGAGAGTAACTAAAGCGATTGATGCAATTGTGCTTCCTGTTGATTCTTTTGAAGAACCTTTGGGGAAGGTGAACTGGCTTGCAGGATACCTGAGTGAATGTCATGATGCTGAGGCAAAAGCAAAGCAAGAGTTGGGAAAAGTACAAGAGGAAACAAGTAATCTTGTGTTTAAGTTGGAAGAAGCCCATTCAACAATAAATTCACTGGAAAATGAATTATCAGTGGCGGAGAATAGTTTGTCACAACTTGCTGAAGAAAAGAGGGAAATGGAAGTCAGTAAGACCAGTGTTGAAAAAGAGTTACAGAGAGCATTAGAAGAAGCTGTTTCCCAGGCTAGCAAGTTTAGCGAGGTTTCTGCAGCTAAAAAGTCGCTGGAAGAGGCATTATCACTTGCAGAAAATAATATGTCTGTTCTTGTCAGTGAAAAAGAGGGGGCTTTAGTCAGTAGAGCCACTGCAGATACAGAGCTAGGAAAGGTCAAAGAGGAAGTTGATATACAGACCAGCAAACTAACAGATGCCTACAAGACCATAGAGTCACTTGAAGTTGCACTTTCTCAGGTACAGGCCAACGTTTCTTTACTTACTGAACAAAACAATGATGCTCAAATTGGTAGATCCAATTTAGAGGCTGAGCTAAAGAAACTGCAAGAGGAAGCTAGGTTGCAGGATAACAAGCTTGCAGATGCCAGTGCAACCATAAATAAACTGGAAGATGCACTGTTGAAAGCAGGGAATGATATATCTGAACTTGAAACTGGAAAGAAAAATGCTGAAGAGGAGATATTAAAACTCAGTTCCAAGTTAAATGCATCCATCGAAGAGTTGCCTGGAACTAATGGCAACACAGAAAACAGGTCCTTAGAGCTCACTGGTCACCTTGATAATCTTCAAGTGCTAATGAAGGACGAGACTATGTTGTCCACAATGAAAAGATGTTTTGAGAAGAAGTTTGAGAGCCTGAAAGATATGGATCTCATTCTTAAAAATATAAGAGACCAGTGTGTTTCAGGGGGTTTAGCTGAGCTGCAAGGTCAGAAAGTACTGGAGGAAGATTCATATGTGACCAAATCTTTTTCAGATGGTCTTGTCAATATTGTCAGTGTTGAAAAGGACAATGCTGAGGTCAATGGTGCAGATGGTAATGATATACCTTCATATTTGAAGACGACTGTGGAAAGGTTGCAGTTGCGCGACATGGTTCTGTCACAAAATTTTGAACGCTTCTCTTCTTTTATAGCTGAGTTTATTGAAACTCTGTTAAGAAATTTACAGGCACGAAGTGATGAAGTAGCAGTTATGTTCGAGCACATGCAGTCTTTTAAACAAAAAGCAAATAATTTGGAAATATATAAACATGAACAGGAGAATACCATAGCCATTTTAGAAAATGATCTCAAGTCTCTTGTCTCTGCTTGTACTGATGCGACCAGAGAACTGCAATTTGAAGCTAAGAACAAGTTACTTGAACTCAGCTCTGTTACTGAACTTGAGGGATTGAGACATAAGTTGCCCCAAGAAACAGGGGCAACAGATGGAGAGACCCCGGAAACACATGAGCAAGGTATTGATGGCAGCAACTATGGTAAAACAGCAGGAATGTTGTCAGTTGCTTGCAGAAATGTTCAAGCTTTGGTCAGACAGTTTGAGATCACAAGTAAAGTGGCCGCGTCTACAATTGAAGATTTGCAGAATAAACTGAAAGAAGCTAGAACTACTTCGGAAAAAGCCATTGAAGAAAGGGATCTAAGACAAAATAGGATTTCCAAGTTGGAGGCGGATATATATGCGTTAGAAAGTTCTACTAATCTGACGCTTAAACTAGAGGATTATCAAGCAAAAGAGGATAGATTGAAGGAAAGGGAGGCAGAACTTTCACCACTACACAATACTTTGTCAATGAAAGAACAAGAGAATGAAGACTCCCTCCTATCAGCATCAGAAGTCAAAATCCTCTTCGACAAAATCAAAGGGATTGAAATCCCTATACCAGAGTCAGAAGTAGGAGACTTAGAATCCCATAATTCAACTCATGTGAAGAAGCTCTTTTGCGTTATCGATAACATTAGTAACTTTCAGCATCAGATAAACTCACTGTCTTGCGAAAAAGAAGAGCTACAGTCAACACTCCGAACGCAGTTGCTTGAAATAGAGCATCTAAAGGAGGAGGTGGAAAACCATGTCAGAGATGGACAAGATACTGAGAAGATGAAAAATGAACTGTCTGTGCTGATATATGCTTTGCAAAAAATTATAGATATGTCGGGAGGTGATGATTTAGTTGGAGACGAGAAGTCTGCTGGTGTGAAGGGACTTGTGTCGGTGTTAGAGAAGCAGGTTATGGCTTTGCTACTTGAATCTAAAAATTCAAAATCAAAAGCTCAGGAACTTGGCACTAAGTTGGTCGAGAGCCAAAAGGTTGTGGATGAATTATCAACCAAGGTTAATTTACTTGAAGTTTCAGCTCAAGGAAGGGTTGCTCAGCCAGAGATTGTCCAGGAAAGGAGCATCTTTGAAGCACCTTCCTTGCCTACTGGTTCAGAGATATCTGAAATTGAAGATGTGGGATCACTTGGAAGCAAAACGATATCCCCTGTTCCATCAGCAGCTCATGTGCGCATGATGCGAAAGGGTTCCACTGACCATCTTGCAATTGATATCGATCCCGAATCTACTCGTTTAATCAGCACTGAAGAAACTGACGAGGACAAAGGCCATGTATTCAAGTCTCTCAATGCATCTGGTATCATTCCAAGACAAGGAAAGTTGATTGCAGATCGAATTGATGGAATTTGGGTATCTGGTGGTCGAAGTTTGATGAGTCGCCCAAGGGCTAGGCTAGGCGTCATTGCCTACTGGCTTGTCTTGCATCTGTGGCTGCTAGGAGTCATCATTCTGCATCAAAGAGCACCCATTAAACAAATGGGTTGGCTTACAGTAAACAATGCATCTACAACCTCATTGACTTGGGGGAACTCTATCTTCACTTGTGGGAAGTGTATTGGCCTCTATGATGTGCACAAGTGTTTACCAGCCAAATCATGCAGTGGAGTTGCATTTAGCCCAAGAGCTTTTGCAAGCCGGAATTCGGTGAAGAAGTTGAGAAGGGAGAGACTAGCAAGCGAAAGGGTAGCAGATAAAACTACTGCTAGTTCTGAAAATGTTCAAAATGACAACAAGGTGGAGCTTTCTGATGATTCAGCTGCAGAGAAAGGGGTTAATGTCCCTTCCAGAGGTGCTGTGCTTCAGGCTTGCACTGTTACTTCCGGGTTGATAGCTGCTTTGGGTATACTAATTCGACAGGCATCTCATGTTGCATCGGTTGAAGGATTACCAGTCCTTGACTGCTCATTGGAAGTATCATTTGATTTTGAGATGTGGCATCTTCAGTTGATTGCCGGATTGGTTATTTTGATATCATCATCCCGATATATATTACTGAAGACATGGCCAGAATTTGCAGAGTCTAGCAAAGCAGCCAATCAACAGGTCCTTACTTCACTTCAACCTTTGGATTTCATAATCGTTGCATTTTTACCTGGGGTCAGCGAGGAACTTCTTTTCCGGGGTGCGCTGCAGCCTCTTTTTGGATCCAATTTGAGTAGTGCACTGGTGGTTGCCCTCGTCTTTGGTGTTCTACACCTGGGCAGTGGCCGAAAGTATTCCTTCGCAGTCTGGGCAAGTTTGGTTGGGTTTGTGTATGGTTACGCAGCCATTGCATCTTCTAGCCTTGTTGTGCCAATGGTTTCTCATGCAGTGAACAATTTGGTGGGAGGGATTTTATGGCGATACAGTTCAGATTCATCAGGAGAGATGTCAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2408

Amino Acids

268.31

Weight (kDa)

4.78

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rce1-like PF02517 2303 - 2391 2.3e-16 Type II CAAX prenyl endopeptidase Rce1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 3937, 4321
AatII GACGTC 1 cut(s) 78
Acc16I TGCGCA 1 cut(s) 6020
Acc36I ACCTGC 1 cut(s) 5728
AccBSI CCGCTC 2 cut(s) 2611, 3181
AccI GTMKAC 3 cut(s) 1414, 5075, 6691
AccII CGCG 2 cut(s) 4596, 5072
AccIII TCCGGA 1 cut(s) 31
AciI CCGC 7 cut(s) 348, 1585, 2611, 3181, 3629, 5070, 5180
AclI AACGTT 2 cut(s) 193, 3975
AclWI GGATC 9 cut(s) 540, 3369, 4014, 4383, 5154, 5977, 6059, 6987, 7000
AcoI YGGCCR 4 cut(s) 22, 5067, 6851, 7054
AcyI GRCGYC 2 cut(s) 75, 6246
AdeI CACNNNGTG 1 cut(s) 4685
AfiI CCNNNNNNNGG 8 cut(s) 31, 335, 592, 785, 6161, 6490, 6635, 6989
AflIII ACRYGT 4 cut(s) 147, 697, 1775, 2018
AgeI ACCGGT 1 cut(s) 85
AhdI GACNNNNNGTC 2 cut(s) 130, 5695
AhlI ACTAGT 2 cut(s) 215, 691
AjiI CACGTC 1 cut(s) 714
AjnI CCWGG 6 cut(s) 494, 3732, 4231, 5898, 6940, 7044
AloI GAACNNNNNNTCC 4 cut(s) 134, 166, 6948, 6980
Alw21I GWGCWC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
Alw44I GTGCAC 2 cut(s) 6419, 7008
AlwI GGATC 9 cut(s) 540, 3369, 4014, 4383, 5154, 5977, 6059, 6987, 7000
AlwNI CAGNNNCTG 2 cut(s) 2264, 2834
Aor13HI TCCGGA 1 cut(s) 31
AoxI GGCC 8 cut(s) 22, 492, 3969, 5067, 6115, 6406, 6851, 7054
ApaLI GTGCAC 2 cut(s) 6419, 7008
AsiGI ACCGGT 1 cut(s) 85
Asp700I GAANNNNTTC 9 cut(s) 1299, 2358, 2601, 2620, 2928, 5119, 6034, 6564, 7063
AspLEI GCGC 3 cut(s) 4596, 6021, 6976
AspS9I GGNCC 4 cut(s) 2511, 3081, 4260, 6892
AsuC2I CCSGG 5 cut(s) 739, 787, 4949, 6670, 6968
AsuII TTCGAA 2 cut(s) 153, 295
AsuNHI GCTAGC 1 cut(s) 3737
AvaII GGWCC 4 cut(s) 2511, 3081, 4260, 6892
BaeGI GKGCMC 2 cut(s) 6423, 7012
BaeI ACNNNNGTAYC 4 cut(s) 1272, 1305, 3481, 3514
BalI TGGCCA 1 cut(s) 6853
BamHI GGATCC 1 cut(s) 6992
BanII GRGCYC 4 cut(s) 510, 855, 1805, 4272
BarI GAAGNNNNNNTAC 6 cut(s) 1311, 1343, 1446, 1478, 3882, 3914
BbsI GAAGAC 5 cut(s) 884, 2736, 4574, 5328, 6851
Bbv12I GWGCWC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
BbvCI CCTCAGC 2 cut(s) 3513, 4524
BceAI ACGGC 1 cut(s) 627
BcgI CGANNNNNNTGC 4 cut(s) 3740, 3774, 5681, 5715
BciT130I CCWGG 6 cut(s) 496, 3734, 4233, 5900, 6942, 7046
BciVI GTATCC 2 cut(s) 205, 3482
BclI TGATCA 2 cut(s) 319, 793
BcnI CCSGG 5 cut(s) 739, 787, 4949, 6670, 6968
BcuI ACTAGT 2 cut(s) 215, 691
BfuAI ACCTGC 1 cut(s) 5728
BfuI GTATCC 2 cut(s) 205, 3482
BlpI GCTNAGC 3 cut(s) 4035, 4425, 5883
BmcAI AGTACT 1 cut(s) 4446
Bme18I GGWCC 4 cut(s) 2511, 3081, 4260, 6892
BmeRI GACNNNNNGTC 2 cut(s) 130, 5695
BmgBI CACGTC 1 cut(s) 714
BmgT120I GGNCC 4 cut(s) 2511, 3081, 4260, 6892
BmiI GGNNCC 6 cut(s) 2512, 2513, 3082, 3083, 6037, 6994
BmtI GCTAGC 1 cut(s) 3741
BoxI GACNNNNGTC 1 cut(s) 5719
BpiI GAAGAC 5 cut(s) 884, 2736, 4574, 5328, 6851
BplI GAGNNNNNCTC 4 cut(s) 1721, 1753, 1964, 1996
BpmI CTGGAG 4 cut(s) 1013, 1731, 3404, 4469
Bpu10I CCTNAGC 6 cut(s) 305, 638, 3233, 3513, 4524, 5784
Bpu1102I GCTNAGC 3 cut(s) 4035, 4425, 5883
Bpu14I TTCGAA 2 cut(s) 153, 295
BpuEI CTTGAG 8 cut(s) 869, 1139, 1343, 1434, 3260, 4784, 4913, 5853
BpuMI CCSGG 5 cut(s) 739, 787, 4949, 6670, 6968
Bsa29I ATCGAT 2 cut(s) 5460, 6063
BsaAI YACGTR 2 cut(s) 1508, 2377
BsaBI GATNNNNATC 3 cut(s) 4374, 5381, 6063
BsaHI GRCGYC 2 cut(s) 75, 6246
BsaI GGTCTC 5 cut(s) 317, 554, 776, 4392, 4937
BsaWI WCCGGW 2 cut(s) 31, 85
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 464, 494
Bsc4I CCNNNNNNNGG 8 cut(s) 31, 335, 592, 785, 6161, 6490, 6635, 6989
Bse118I RCCGGY 1 cut(s) 85
Bse3DI GCAATG 4 cut(s) 1095, 1755, 6249, 7116
Bse8I GATNNNNATC 3 cut(s) 4374, 5381, 6063
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 6 cut(s) 496, 3734, 4233, 5900, 6942, 7046
BseCI ATCGAT 2 cut(s) 5460, 6063
BseJI GATNNNNATC 3 cut(s) 4374, 5381, 6063
BseLI CCNNNNNNNGG 8 cut(s) 31, 335, 592, 785, 6161, 6490, 6635, 6989
BseMI GCAATG 4 cut(s) 1095, 1755, 6249, 7116
BseRI GAGGAG 4 cut(s) 2435, 3005, 4196, 5582
BseSI GKGCMC 2 cut(s) 6423, 7012
BsgI GTGCAG 2 cut(s) 1067, 4557
Bsh1236I CGCG 2 cut(s) 4596, 5072
BshFI GGCC 8 cut(s) 24, 494, 3971, 5069, 6117, 6408, 6853, 7056
BshTI ACCGGT 1 cut(s) 85
BshVI ATCGAT 2 cut(s) 5460, 6063
BsiHKAI GWGCWC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
BslFI GGGAC 5 cut(s) 2497, 3067, 3293, 5727, 6611
BslI CCNNNNNNNGG 8 cut(s) 31, 335, 592, 785, 6161, 6490, 6635, 6989
BsmBI CGTCTC 1 cut(s) 5682
BsmFI GGGAC 5 cut(s) 2497, 3067, 3293, 5727, 6611
BsmI GAATGC 7 cut(s) 967, 1924, 2286, 2554, 2856, 3278, 3315
BsnI GGCC 8 cut(s) 24, 494, 3971, 5069, 6117, 6408, 6853, 7056
Bso31I GGTCTC 5 cut(s) 317, 554, 776, 4392, 4937
Bsp119I TTCGAA 2 cut(s) 153, 295
Bsp1286I GDGCHC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
Bsp13I TCCGGA 1 cut(s) 31
Bsp1407I TGTACA 1 cut(s) 2943
Bsp1720I GCTNAGC 3 cut(s) 4035, 4425, 5883
Bsp19I CCATGG 1 cut(s) 3144
BspACI CCGC 7 cut(s) 348, 1585, 2611, 3181, 3629, 5070, 5180
BspANI GGCC 8 cut(s) 24, 494, 3971, 5069, 6117, 6408, 6853, 7056
BspDI ATCGAT 2 cut(s) 5460, 6063
BspEI TCCGGA 1 cut(s) 31
BspFNI CGCG 2 cut(s) 4596, 5072
BspHI TCATGA 1 cut(s) 3505
BspLI GGNNCC 6 cut(s) 2512, 2513, 3082, 3083, 6037, 6994
BspMAI CTGCAG 7 cut(s) 46, 52, 2179, 3763, 3862, 6610, 6981
BspMI ACCTGC 1 cut(s) 5728
BspOI GCTAGC 1 cut(s) 3741
BspPI GGATC 9 cut(s) 540, 3369, 4014, 4383, 5154, 5977, 6059, 6987, 7000
BspQI GCTCTTC 3 cut(s) 5, 1290, 5508
BspT104I TTCGAA 2 cut(s) 153, 295
BspTNI GGTCTC 5 cut(s) 317, 554, 776, 4392, 4937
BsrBI CCGCTC 2 cut(s) 2611, 3181
BsrDI GCAATG 4 cut(s) 1095, 1755, 6249, 7116
BsrFI RCCGGY 1 cut(s) 85
BsrGI TGTACA 1 cut(s) 2943
BssAI RCCGGY 1 cut(s) 85
BssNAI GTATAC 1 cut(s) 6692
BssNI GRCGYC 2 cut(s) 75, 6246
BssT1I CCWWGG 3 cut(s) 3144, 5841, 6230
Bst1107I GTATAC 1 cut(s) 6692
Bst2UI CCWGG 6 cut(s) 496, 3734, 4233, 5900, 6942, 7046
BstACI GRCGYC 2 cut(s) 75, 6246
BstAPI GCANNNNNTGC 1 cut(s) 7118
BstAUI TGTACA 1 cut(s) 2943
BstBAI YACGTR 2 cut(s) 1508, 2377
BstBI TTCGAA 2 cut(s) 153, 295
BstDSI CCRYGG 3 cut(s) 422, 2574, 3144
BstEII GGTNACC 1 cut(s) 4277
BstENI CCTNNNNNAGG 1 cut(s) 6633
BstFNI CGCG 2 cut(s) 4596, 5072
BstHHI GCGC 3 cut(s) 4596, 6021, 6976
BstNI CCWGG 6 cut(s) 496, 3734, 4233, 5900, 6942, 7046
BstNSI RCATGY 6 cut(s) 151, 701, 1779, 2022, 3400, 4717
BstPAI GACNNNNGTC 1 cut(s) 5719
BstPI GGTNACC 1 cut(s) 4277
BstSLI GKGCMC 2 cut(s) 6423, 7012
BstSNI TACGTA 2 cut(s) 1508, 2377
BstUI CGCG 2 cut(s) 4596, 5072
BstV2I GAAGAC 5 cut(s) 884, 2736, 4574, 5328, 6851
BstX2I RGATCY 4 cut(s) 4019, 4375, 5146, 6992
BstYI RGATCY 4 cut(s) 4019, 4375, 5146, 6992
BstZ17I GTATAC 1 cut(s) 6692
Bsu15I ATCGAT 2 cut(s) 5460, 6063
BsuI GTATCC 2 cut(s) 205, 3482
BsuRI GGCC 8 cut(s) 24, 494, 3971, 5069, 6117, 6408, 6853, 7056
BsuTUI ATCGAT 2 cut(s) 5460, 6063
BtgI CCRYGG 3 cut(s) 422, 2574, 3144
BtrI CACGTC 1 cut(s) 714
BveI ACCTGC 1 cut(s) 5728
CaiI CAGNNNCTG 2 cut(s) 2264, 2834
CciI TCATGA 1 cut(s) 3505
CfoI GCGC 3 cut(s) 4596, 6021, 6976
Cfr10I RCCGGY 1 cut(s) 85
Cfr13I GGNCC 4 cut(s) 2511, 3081, 4260, 6892
ClaI ATCGAT 2 cut(s) 5460, 6063
CseI GACGC 7 cut(s) 134, 1889, 2153, 2723, 5061, 5224, 6235
CspAI ACCGGT 1 cut(s) 85
CspCI CAANNNNNGTGG 8 cut(s) 1750, 1785, 2257, 2292, 2827, 2862, 5046, 5081
DraI TTTAAA 1 cut(s) 4726
DraIII CACNNNGTG 1 cut(s) 4685
DrdI GACNNNNNNGTC 2 cut(s) 3937, 4321
DriI GACNNNNNGTC 2 cut(s) 130, 5695
DseDI GACNNNNNNGTC 2 cut(s) 3937, 4321
EaeI YGGCCR 4 cut(s) 22, 5067, 6851, 7054
Eam1105I GACNNNNNGTC 2 cut(s) 130, 5695
EciI GGCGGA 2 cut(s) 3644, 5195
Ecl136II GAGCTC 4 cut(s) 508, 853, 1803, 4270
Eco105I TACGTA 2 cut(s) 1508, 2377
Eco130I CCWWGG 3 cut(s) 3144, 5841, 6230
Eco24I GRGCYC 4 cut(s) 510, 855, 1805, 4272
Eco31I GGTCTC 5 cut(s) 317, 554, 776, 4392, 4937
Eco32I GATATC 5 cut(s) 172, 5949, 5991, 6061, 6819
Eco47I GGWCC 4 cut(s) 2511, 3081, 4260, 6892
Eco53kI GAGCTC 4 cut(s) 508, 853, 1803, 4270
Eco91I GGTNACC 1 cut(s) 4277
EcoICRI GAGCTC 4 cut(s) 508, 853, 1803, 4270
EcoNI CCTNNNNNAGG 1 cut(s) 6633
EcoO109I RGGNCCY 4 cut(s) 2511, 3081, 4260, 6892
EcoO65I GGTNACC 1 cut(s) 4277
EcoRI GAATTC 3 cut(s) 297, 1376, 6487
EcoRII CCWGG 6 cut(s) 494, 3732, 4231, 5898, 6940, 7044
EcoRV GATATC 5 cut(s) 172, 5949, 5991, 6061, 6819
EcoT14I CCWWGG 3 cut(s) 3144, 5841, 6230
EcoT22I ATGCAT 6 cut(s) 601, 2288, 2858, 4216, 6142, 6352
EcoT38I GRGCYC 4 cut(s) 510, 855, 1805, 4272
ErhI CCWWGG 3 cut(s) 3144, 5841, 6230
Esp3I CGTCTC 1 cut(s) 5682
FaqI GGGAC 5 cut(s) 2497, 3067, 3293, 5727, 6611
FauI CCCGC 3 cut(s) 1578, 2604, 3174
FauNDI CATATG 1 cut(s) 4462
FbaI TGATCA 2 cut(s) 319, 793
FblI GTMKAC 3 cut(s) 1414, 5075, 6691
FriOI GRGCYC 4 cut(s) 510, 855, 1805, 4272
FspAI RTGCGCAY 1 cut(s) 6020
FspI TGCGCA 1 cut(s) 6020
GlaI GCGC 3 cut(s) 4595, 6020, 6975
GsuI CTGGAG 4 cut(s) 1013, 1731, 3404, 4469
HaeIII GGCC 8 cut(s) 24, 494, 3971, 5069, 6117, 6408, 6853, 7056
HgaI GACGC 7 cut(s) 134, 1889, 2153, 2723, 5061, 5224, 6235
HhaI GCGC 3 cut(s) 4596, 6021, 6976
Hin1I GRCGYC 2 cut(s) 75, 6246
Hin6I GCGC 3 cut(s) 4594, 6019, 6974
HinP1I GCGC 3 cut(s) 4594, 6019, 6974
HincII GTYRAC 5 cut(s) 656, 1560, 2067, 2637, 5526
HindII GTYRAC 5 cut(s) 656, 1560, 2067, 2637, 5526
HindIII AAGCTT 3 cut(s) 1031, 4079, 5031
HpaI GTTAAC 2 cut(s) 1560, 2637
Hpy99I CGWCG 3 cut(s) 77, 80, 170
HpyCH4IV ACGT 7 cut(s) 75, 193, 713, 1507, 2006, 2376, 3975
HpySE526I ACGT 7 cut(s) 75, 193, 713, 1507, 2006, 2376, 3975
Hsp92I GRCGYC 2 cut(s) 75, 6246
HspAI GCGC 3 cut(s) 4594, 6019, 6974
KflI GGGWCCC 2 cut(s) 2511, 3081
Kpn2I TCCGGA 1 cut(s) 31
Ksp22I TGATCA 2 cut(s) 319, 793
KspAI GTTAAC 2 cut(s) 1560, 2637
LguI GCTCTTC 3 cut(s) 5, 1290, 5508
LmnI GCTCC 7 cut(s) 988, 994, 1897, 2344, 2914, 5907, 6586
MaeII ACGT 7 cut(s) 75, 193, 713, 1507, 2006, 2376, 3975
MbiI CCGCTC 2 cut(s) 2611, 3181
MfeI CAATTG 3 cut(s) 3429, 5079, 6054
MflI RGATCY 4 cut(s) 4019, 4375, 5146, 6992
MhlI GDGCHC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
MlsI TGGCCA 1 cut(s) 6853
MluNI TGGCCA 1 cut(s) 6853
Mox20I TGGCCA 1 cut(s) 6853
Mph1103I ATGCAT 6 cut(s) 601, 2288, 2858, 4216, 6142, 6352
MroI TCCGGA 1 cut(s) 31
MroXI GAANNNNTTC 9 cut(s) 1299, 2358, 2601, 2620, 2928, 5119, 6034, 6564, 7063
MscI TGGCCA 1 cut(s) 6853
MslI CAYNNNNRTG 2 cut(s) 716, 740
Msp20I TGGCCA 1 cut(s) 6853
MspA1I CMGCKG 6 cut(s) 47, 208, 1577, 2084, 2654, 6605
MunI CAATTG 3 cut(s) 3429, 5079, 6054
Mva1269I GAATGC 7 cut(s) 967, 1924, 2286, 2554, 2856, 3278, 3315
MvaI CCWGG 6 cut(s) 496, 3734, 4233, 5900, 6942, 7046
MvnI CGCG 2 cut(s) 4596, 5072
NciI CCSGG 5 cut(s) 739, 787, 4949, 6670, 6968
NcoI CCATGG 1 cut(s) 3144
NdeI CATATG 1 cut(s) 4462
NheI GCTAGC 1 cut(s) 3737
NlaIV GGNNCC 6 cut(s) 2512, 2513, 3082, 3083, 6037, 6994
NmuCI GTSAC 6 cut(s) 581, 3642, 3939, 4277, 4465, 4608
NsbI TGCGCA 1 cut(s) 6020
NsiI ATGCAT 6 cut(s) 601, 2288, 2858, 4216, 6142, 6352
NspI RCATGY 6 cut(s) 151, 701, 1779, 2022, 3400, 4717
NspV TTCGAA 2 cut(s) 153, 295
PagI TCATGA 1 cut(s) 3505
PciI ACATGT 4 cut(s) 147, 697, 1775, 2018
PciSI GCTCTTC 3 cut(s) 5, 1290, 5508
PctI GAATGC 7 cut(s) 967, 1924, 2286, 2554, 2856, 3278, 3315
PdmI GAANNNNTTC 9 cut(s) 1299, 2358, 2601, 2620, 2928, 5119, 6034, 6564, 7063
PflFI GACNNNGTC 1 cut(s) 888
PfoI TCCNGGA 1 cut(s) 5898
PinAI ACCGGT 1 cut(s) 85
Ppu21I YACGTR 2 cut(s) 1508, 2377
PpuMI RGGWCCY 4 cut(s) 2511, 3081, 4260, 6892
PscI ACATGT 4 cut(s) 147, 697, 1775, 2018
PshAI GACNNNNGTC 1 cut(s) 5719
Psp124BI GAGCTC 4 cut(s) 510, 855, 1805, 4272
Psp1406I AACGTT 2 cut(s) 193, 3975
Psp5II RGGWCCY 4 cut(s) 2511, 3081, 4260, 6892
Psp6I CCWGG 6 cut(s) 494, 3732, 4231, 5898, 6940, 7044
PspEI GGTNACC 1 cut(s) 4277
PspGI CCWGG 6 cut(s) 494, 3732, 4231, 5898, 6940, 7044
PspN4I GGNNCC 6 cut(s) 2512, 2513, 3082, 3083, 6037, 6994
PspPI GGNCC 4 cut(s) 2511, 3081, 4260, 6892
PspPPI RGGWCCY 4 cut(s) 2511, 3081, 4260, 6892
PsrI GAACNNNNNNTAC 2 cut(s) 3363, 3395
PstI CTGCAG 7 cut(s) 46, 52, 2179, 3763, 3862, 6610, 6981
PstNI CAGNNNCTG 2 cut(s) 2264, 2834
PsuI RGATCY 4 cut(s) 4019, 4375, 5146, 6992
PsyI GACNNNGTC 1 cut(s) 888
PvuII CAGCTG 6 cut(s) 47, 208, 1577, 2084, 2654, 6605
RseI CAYNNNNRTG 2 cut(s) 716, 740
SacI GAGCTC 4 cut(s) 510, 855, 1805, 4272
SapI GCTCTTC 3 cut(s) 5, 1290, 5508
Sau96I GGNCC 4 cut(s) 2511, 3081, 4260, 6892
ScaI AGTACT 1 cut(s) 4446
SduI GDGCHC 9 cut(s) 510, 855, 1159, 1805, 4272, 4713, 6313, 6423, 7012
SfuI TTCGAA 2 cut(s) 153, 295
SgrAI CRCCGGYG 1 cut(s) 85
SinI GGWCC 4 cut(s) 2511, 3081, 4260, 6892
SmiMI CAYNNNNRTG 2 cut(s) 716, 740
SmlI CTYRAG 8 cut(s) 848, 1118, 1358, 1449, 3239, 4799, 4892, 5868
SmoI CTYRAG 8 cut(s) 848, 1118, 1358, 1449, 3239, 4799, 4892, 5868
SnaBI TACGTA 2 cut(s) 1508, 2377
SpeI ACTAGT 2 cut(s) 215, 691
SsiI CCGC 7 cut(s) 348, 1585, 2611, 3181, 3629, 5070, 5180
SspI AATATT 4 cut(s) 1549, 2410, 2980, 4498
SstI GAGCTC 4 cut(s) 510, 855, 1805, 4272
StyI CCWWGG 3 cut(s) 3144, 5841, 6230
TaiI ACGT 7 cut(s) 78, 196, 716, 1510, 2009, 2379, 3978
TatI WGTACW 8 cut(s) 694, 1875, 2139, 2709, 2943, 3544, 4444, 4820
TauI GCSGC 1 cut(s) 5072
TseFI GTSAC 6 cut(s) 581, 3642, 3939, 4277, 4465, 4608
Tsp45I GTSAC 6 cut(s) 581, 3642, 3939, 4277, 4465, 4608
TspGWI ACGGA 1 cut(s) 2563
Tth111I GACNNNGTC 1 cut(s) 888
VneI GTGCAC 2 cut(s) 6419, 7008
VpaK11BI GGWCC 4 cut(s) 2511, 3081, 4260, 6892
XagI CCTNNNNNAGG 1 cut(s) 6633
XbaI TCTAGA 3 cut(s) 895, 2413, 2983
XceI RCATGY 6 cut(s) 151, 701, 1779, 2022, 3400, 4717
XcmI CCANNNNNNNNNTGG 3 cut(s) 4108, 5588, 6322
XmiI GTMKAC 3 cut(s) 1414, 5075, 6691
XmnI GAANNNNTTC 9 cut(s) 1299, 2358, 2601, 2620, 2928, 5119, 6034, 6564, 7063
ZraI GACGTC 1 cut(s) 76
ZrmI AGTACT 1 cut(s) 4446
Zsp2I ATGCAT 6 cut(s) 601, 2288, 2858, 4216, 6142, 6352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.