Heavy metal-associated isoprenylated plant protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71050 |
| fragaria_vesca | FvH4_4g32250 FvH4_4g32250 FvH4_4g32251 FvH4_4g32251 |
| malus_domestica | MD13G1026800.v1.1 MD16G1029900.v1.1 |
| prunus_persica | Prupe.1G323000_v2.0.a1 |
| pyrus_communis | pycom13g02540 pycom16g02550 |
| rosa_chinensis | RchiOBHm_Chr4g0440991 RchiOBHm_Chr4g0441001 RchiOBHm_Chr4g0441041 |
| rosa_laevigata | RLG00000006125 RLG00000006131 RLG00000006132 |
| rosa_multiflora | Rmu_sc0000424.1_g000032 Rmu_sc0000424.1_g000033 Rmu_sc0000424.1_g000042 |
| rosa_roxburghii | Rroxscaffold_5G00381860 Rroxscaffold_5G00381880 Rroxscaffold_5G00381960 |
| rosa_rugosa | Rorug04G0330000 Rorug04G0330000 |
| rosa_samantha | Rh4AG381800 Rh4AG382000 Rh4BG395200 Rh4CG410100 Rh4CG410300 Rh4CG410700 Rh4DG388200 Rh4DG388700 |
| rosa_wichuraiana | Rw4G032900 Rw4G032910 Rw4G032950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 367 |
| AciI | CCGC | 1 cut(s) | 401 |
| AfaI | GTAC | 2 cut(s) | 393, 428 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 232 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| AluBI | AGCT | 2 cut(s) | 296, 353 |
| AluI | AGCT | 2 cut(s) | 296, 353 |
| Alw26I | GTCTC | 1 cut(s) | 142 |
| AoxI | GGCC | 1 cut(s) | 305 |
| AspLEI | GCGC | 1 cut(s) | 467 |
| AspS9I | GGNCC | 2 cut(s) | 152, 282 |
| AsuC2I | CCSGG | 1 cut(s) | 227 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 241, 247 |
| AvaII | GGWCC | 2 cut(s) | 152, 282 |
| AxyI | CCTNAGG | 1 cut(s) | 396 |
| BanI | GGYRCC | 1 cut(s) | 367 |
| BccI | CCATC | 2 cut(s) | 101, 476 |
| BcnI | CCSGG | 1 cut(s) | 227 |
| BcoDI | GTCTC | 1 cut(s) | 142 |
| BfaI | CTAG | 1 cut(s) | 11 |
| Bme1390I | CCNGG | 1 cut(s) | 227 |
| Bme18I | GGWCC | 2 cut(s) | 152, 282 |
| BmgT120I | GGNCC | 2 cut(s) | 152, 282 |
| BmiI | GGNNCC | 3 cut(s) | 154, 252, 369 |
| BmrFI | CCNGG | 1 cut(s) | 227 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 416, 448 |
| BpuMI | CCSGG | 1 cut(s) | 227 |
| BsaBI | GATNNNNATC | 1 cut(s) | 450 |
| BsaWI | WCCGGW | 2 cut(s) | 284, 374 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 232 |
| Bse21I | CCTNAGG | 1 cut(s) | 396 |
| Bse8I | GATNNNNATC | 1 cut(s) | 450 |
| BseJI | GATNNNNATC | 1 cut(s) | 450 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BseMII | CTCAG | 3 cut(s) | 64, 288, 410 |
| BsgI | GTGCAG | 1 cut(s) | 434 |
| BshFI | GGCC | 1 cut(s) | 307 |
| BshNI | GGYRCC | 1 cut(s) | 367 |
| BsiSI | CCGG | 4 cut(s) | 226, 285, 348, 375 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 232 |
| BsmAI | GTCTC | 1 cut(s) | 142 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| BsnI | GGCC | 1 cut(s) | 307 |
| BspACI | CCGC | 1 cut(s) | 401 |
| BspANI | GGCC | 1 cut(s) | 307 |
| BspCNI | CTCAG | 3 cut(s) | 63, 289, 409 |
| BspLI | GGNNCC | 3 cut(s) | 154, 252, 369 |
| BspT107I | GGYRCC | 1 cut(s) | 367 |
| Bst4CI | ACNGT | 5 cut(s) | 79, 104, 235, 372, 412 |
| BstC8I | GCNNGC | 1 cut(s) | 463 |
| BstDEI | CTNAG | 3 cut(s) | 50, 297, 396 |
| BstHHI | GCGC | 1 cut(s) | 467 |
| BstMAI | GTCTC | 1 cut(s) | 142 |
| BstSCI | CCNGG | 1 cut(s) | 225 |
| Bsu36I | CCTNAGG | 1 cut(s) | 396 |
| BsuRI | GGCC | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 448 |
| Cac8I | GCNNGC | 1 cut(s) | 463 |
| CfoI | GCGC | 1 cut(s) | 467 |
| Cfr13I | GGNCC | 2 cut(s) | 152, 282 |
| CseI | GACGC | 1 cut(s) | 313 |
| Csp6I | GTAC | 2 cut(s) | 392, 427 |
| CviAII | CATG | 4 cut(s) | 145, 436, 458, 472 |
| CviJI | RGCY | 8 cut(s) | 67, 111, 184, 225, 253, 296, 307, 353 |
| CviKI_1 | RGCY | 8 cut(s) | 67, 111, 184, 225, 253, 296, 307, 353 |
| CviQI | GTAC | 2 cut(s) | 392, 427 |
| DdeI | CTNAG | 3 cut(s) | 50, 297, 396 |
| Eco47I | GGWCC | 2 cut(s) | 152, 282 |
| Eco81I | CCTNAGG | 1 cut(s) | 396 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| FaeI | CATG | 4 cut(s) | 148, 439, 461, 475 |
| FaiI | YATR | 9 cut(s) | 146, 159, 167, 246, 319, 357, 437, 459, 473 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| FatI | CATG | 4 cut(s) | 144, 435, 457, 471 |
| FspBI | CTAG | 1 cut(s) | 11 |
| GlaI | GCGC | 1 cut(s) | 466 |
| HaeIII | GGCC | 1 cut(s) | 307 |
| HapII | CCGG | 4 cut(s) | 226, 285, 348, 375 |
| HgaI | GACGC | 1 cut(s) | 313 |
| HhaI | GCGC | 1 cut(s) | 467 |
| Hin1II | CATG | 4 cut(s) | 148, 439, 461, 475 |
| Hin6I | GCGC | 1 cut(s) | 465 |
| HinP1I | GCGC | 1 cut(s) | 465 |
| HincII | GTYRAC | 1 cut(s) | 82 |
| HindII | GTYRAC | 1 cut(s) | 82 |
| HinfI | GANTC | 3 cut(s) | 14, 48, 451 |
| HpaII | CCGG | 4 cut(s) | 226, 285, 348, 375 |
| HphI | GGTGA | 3 cut(s) | 103, 241, 247 |
| Hpy166II | GTNNAC | 3 cut(s) | 82, 211, 429 |
| Hpy188I | TCNGA | 3 cut(s) | 25, 53, 177 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 45, 385 |
| Hpy8I | GTNNAC | 3 cut(s) | 82, 211, 429 |
| Hpy99I | CGWCG | 2 cut(s) | 329, 425 |
| HpyAV | CCTTC | 2 cut(s) | 182, 358 |
| HpyCH4III | ACNGT | 5 cut(s) | 79, 104, 235, 372, 412 |
| HpyCH4IV | ACGT | 4 cut(s) | 312, 342, 381, 390 |
| HpyCH4V | TGCA | 4 cut(s) | 73, 134, 194, 415 |
| HpyF3I | CTNAG | 3 cut(s) | 50, 297, 396 |
| HpySE526I | ACGT | 4 cut(s) | 312, 342, 381, 390 |
| Hsp92II | CATG | 4 cut(s) | 148, 439, 461, 475 |
| HspAI | GCGC | 1 cut(s) | 465 |
| LmnI | GCTCC | 2 cut(s) | 250, 350 |
| MaeI | CTAG | 1 cut(s) | 11 |
| MaeII | ACGT | 4 cut(s) | 312, 342, 381, 390 |
| MaeIII | GTNAC | 3 cut(s) | 229, 235, 377 |
| MlyI | GAGTC | 2 cut(s) | 8, 42 |
| MnlI | CCTC | 5 cut(s) | 264, 273, 405, 442, 465 |
| MseI | TTAA | 2 cut(s) | 126, 276 |
| MslI | CAYNNNNRTG | 2 cut(s) | 89, 434 |
| MspI | CCGG | 4 cut(s) | 226, 285, 348, 375 |
| MspR9I | CCNGG | 1 cut(s) | 227 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| NciI | CCSGG | 1 cut(s) | 227 |
| NlaIII | CATG | 4 cut(s) | 148, 439, 461, 475 |
| NlaIV | GGNNCC | 3 cut(s) | 154, 252, 369 |
| NmuCI | GTSAC | 2 cut(s) | 229, 235 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 387 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PfeI | GAWTC | 1 cut(s) | 451 |
| PleI | GAGTC | 2 cut(s) | 8, 42 |
| PpsI | GAGTC | 2 cut(s) | 8, 42 |
| PpuMI | RGGWCCY | 1 cut(s) | 152 |
| Psp5II | RGGWCCY | 1 cut(s) | 152 |
| PspN4I | GGNNCC | 3 cut(s) | 154, 252, 369 |
| PspPI | GGNCC | 2 cut(s) | 152, 282 |
| PspPPI | RGGWCCY | 1 cut(s) | 152 |
| RsaI | GTAC | 2 cut(s) | 393, 428 |
| RsaNI | GTAC | 2 cut(s) | 392, 427 |
| RseI | CAYNNNNRTG | 2 cut(s) | 89, 434 |
| SaqAI | TTAA | 2 cut(s) | 126, 276 |
| Sau96I | GGNCC | 2 cut(s) | 152, 282 |
| SchI | GAGTC | 2 cut(s) | 8, 42 |
| ScrFI | CCNGG | 1 cut(s) | 227 |
| SinI | GGWCC | 2 cut(s) | 152, 282 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 89, 434 |
| SsiI | CCGC | 1 cut(s) | 401 |
| SspMI | CTAG | 1 cut(s) | 11 |
| StyD4I | CCNGG | 1 cut(s) | 225 |
| TaaI | ACNGT | 5 cut(s) | 79, 104, 235, 372, 412 |
| TaiI | ACGT | 4 cut(s) | 315, 345, 384, 393 |
| TatI | WGTACW | 1 cut(s) | 426 |
| TfiI | GAWTC | 1 cut(s) | 451 |
| Tru1I | TTAA | 2 cut(s) | 126, 276 |
| Tru9I | TTAA | 2 cut(s) | 126, 276 |
| TscAI | CASTG | 1 cut(s) | 448 |
| TseFI | GTSAC | 2 cut(s) | 229, 235 |
| Tsp45I | GTSAC | 2 cut(s) | 229, 235 |
| TspDTI | ATGAA | 1 cut(s) | 161 |
| TspRI | CASTG | 1 cut(s) | 448 |
| VpaK11BI | GGWCC | 2 cut(s) | 152, 282 |
| XbaI | TCTAGA | 1 cut(s) | 10 |
| XspI | CTAG | 1 cut(s) | 11 |