Rroxscaffold_7G00167220

DUF21 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0009069
Physical Location & Seq
Forward (+)
8443484 .. 8447048
3565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00167220.1

Sequence Viewer

Length: 1533 bp
ATGGCGACGGAGGTGACTTGTTGCGAGCCCAAGTTCTGGTTTTATTTGCTTGTGATCATCGGCCTGGTCTGCTTCGCCGGAATGATGGCCGGCCTTACTCTGGGCCTCATGTCCCTGGGCCTCGTCGACCTCGAGGTCCTCATGAAGTCCGGCCGCCCTCAGGATCGCTTACACGCCGCTAAAATCTATCCGGTGGTGAAAAATCAGCATCTGCTACTTTGTACACTTTTAATAGGCAACGCGTTAGCGATGGAGGCTCTTCCTGTCTTCTTGGACAGTCTTGTGCCTCCTTGGGCAGCTGTTGCCATATCCGTCACTCTCATTCTTTTGTTTGGAGAGATAATGCCACAAGCTGTGTGTACTCGCTATGGATTGACTGTTGGGGCAACACTGGCACCATTTGTGCGCGTTCTTCTCATGCTTTTCCTCCCTATTTCTTATCCAATTAGTAAGGTTCTGGATTACATGTTAGGTAAGGGACAGACTGCCCTTCTAAGAAGAGCAGAGCTACAGACTTTTGTGGACTTTCATGGAAATGAGGCTGGGAAAGGTGGGGATCTCACACATGATGAGACTACCATCATTGCTGGGGCACTTCAATTGACTGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAATGCATTTTCCCTTGATCTGGATGCACCTCTTACTTTGGAAACACTGAATGCGATAATGGCAATGGGTCATAGTAGAGTTCCGGTTTATGCTGAGAACCCCAGAAATATAATTGGACTTGTTCTGGTCAAAAATCTCTTGATGATTGATACAGAAGAAACAGTTACTTTGAGAAAAATGATGATAAGAAAAATTCCTCGGGTTTCAGAAGACATGCCGCTATATGATATTCTTAATGAATTTCAGAAGGGTCACAGTCATATTGCTGTTGTCTATAAGGATGTAAAGCAGACACTAAAGAACGGCAAAGAGAGTGAAACACTAGAGGCATCACTGAGGAAAGATGAAAAACTGGGTGGCCCCACAGCTGAGACTAAGAGTTTGGGGCCAAAATTGGATTCAGACAATGCTCAGATAGATTTAGACCATAGTGATGGGGGTCAGAAAACTAAGAAGAGCCCATCAGCTACTCCTTCTTTTAAGAAGCGGCACAGAGGTTGTTCATTTTGTATTCTGGACATTGAGAATGGTCCCATTCCAGTATTCCCACCCAGTCAAGAGGTTGTTGGAGTAATTAGCATGGAGGATGTCATTGAGGAACTTCTTCAGGAAGAGATACTGGATGAAACAGATGAGTATGTCAATATCCATAACAGGATTAAGATCAATATGCATGCATCTCAGGAAAAGGCTCCTTCCTTGAATTCACCCCAGCCTTCCCCAGAAGGGACATCTGTCATGGACACCTCAGCACCGATATCATCAGCGCCGACGGATTTAGGTTCCACTCAATATCAAGACTCTGGTAAGAATGCTGCGGATTTGATGCCAACAGGCTCAAACACCAGTGCGTATCAAGCTTCTGAAGCTGAGACGTCAAGGGATCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBS DUF21

Protein Analysis

510

Amino Acids

55.62

Weight (kDa)

5.22

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CNNM PF01595 18 - 188 7.5e-32 Cyclin M transmembrane N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
AatII GACGTC 1 cut(s) 1520
AbsI CCTCGAGG 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 394
AccB7I CCANNNNNTGG 1 cut(s) 36
AccI GTMKAC 1 cut(s) 126
AccII CGCG 2 cut(s) 242, 408
AciI CCGC 5 cut(s) 154, 177, 860, 1129, 1460
AclWI GGATC 2 cut(s) 171, 564
AcoI YGGCCR 2 cut(s) 87, 151
AcsI RAATTY 3 cut(s) 834, 881, 1345
AcuI CTGAAG 2 cut(s) 1232, 1527
AcyI GRCGYC 1 cut(s) 1517
AfaI GTAC 2 cut(s) 223, 361
AfiI CCNNNNNNNGG 5 cut(s) 36, 100, 160, 661, 1368
AflIII ACRYGT 2 cut(s) 240, 465
AgsI TTSAA 2 cut(s) 599, 1345
AjnI CCWGG 2 cut(s) 63, 114
AjuI GAANNNNNNNTTGG 2 cut(s) 1024, 1056
AluBI AGCT 7 cut(s) 299, 353, 508, 1010, 1109, 1502, 1511
AluI AGCT 7 cut(s) 299, 353, 508, 1010, 1109, 1502, 1511
Alw26I GTCTC 3 cut(s) 566, 1007, 1508
AlwI GGATC 2 cut(s) 171, 564
AlwNI CAGNNNCTG 1 cut(s) 211
Ama87I CYCGRG 2 cut(s) 131, 840
AoxI GGCC 8 cut(s) 61, 87, 91, 103, 118, 151, 1000, 1028
ApeKI GCWGC 2 cut(s) 296, 1457
ApoI RAATTY 3 cut(s) 834, 881, 1345
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp700I GAANNNNTTC 1 cut(s) 1245
AspLEI GCGC 2 cut(s) 408, 1411
AspS9I GGNCC 6 cut(s) 103, 118, 136, 1001, 1028, 1172
AsuHPI GGTGA 3 cut(s) 25, 208, 1341
AvaI CYCGRG 2 cut(s) 131, 840
AvaII GGWCC 2 cut(s) 136, 1172
AxyI CCTNAGG 1 cut(s) 159
BaeGI GKGCMC 1 cut(s) 595
BanI GGYRCC 1 cut(s) 394
BanII GRGCYC 2 cut(s) 30, 1103
BbsI GAAGAC 2 cut(s) 259, 858
BbvCI CCTCAGC 1 cut(s) 1390
BbvI GCAGC 2 cut(s) 308, 1444
BccI CCATC 5 cut(s) 79, 244, 587, 1070, 1111
BceAI ACGGC 1 cut(s) 961
BciT130I CCWGG 2 cut(s) 65, 116
BclI TGATCA 1 cut(s) 54
BcoDI GTCTC 3 cut(s) 566, 1007, 1508
BfaI CTAG 1 cut(s) 965
BfmI CTRYAG 1 cut(s) 509
BfoI RGCGCY 1 cut(s) 1412
BisI GCNGC 6 cut(s) 154, 177, 297, 860, 1130, 1458
BlsI GCNGC 6 cut(s) 155, 178, 298, 861, 1131, 1459
Bme1390I CCNGG 2 cut(s) 65, 116
Bme18I GGWCC 2 cut(s) 136, 1172
BmeT110I CYCGRG 2 cut(s) 131, 840
BmgT120I GGNCC 6 cut(s) 103, 118, 136, 1001, 1028, 1172
BmiI GGNNCC 6 cut(s) 396, 1003, 1029, 1174, 1335, 1426
BmrFI CCNGG 2 cut(s) 65, 116
BmrI ACTGGG 2 cut(s) 1004, 1188
BmsI GCATC 6 cut(s) 217, 613, 655, 980, 1328, 1458
BmuI ACTGGG 2 cut(s) 1004, 1188
BoxI GACNNNNGTC 1 cut(s) 1376
BpiI GAAGAC 2 cut(s) 259, 858
Bpu10I CCTNAGC 1 cut(s) 1390
Bsa29I ATCGAT 1 cut(s) 1528
BsaBI GATNNNNATC 1 cut(s) 1304
BsaHI GRCGYC 1 cut(s) 1517
BsaJI CCNNGG 4 cut(s) 114, 115, 290, 839
BsaWI WCCGGW 2 cut(s) 190, 724
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 100, 160, 661, 1368
Bse118I RCCGGY 1 cut(s) 89
Bse1I ACTGG 6 cut(s) 396, 999, 1181, 1194, 1266, 1488
Bse21I CCTNAGG 1 cut(s) 159
Bse3DI GCAATG 2 cut(s) 582, 711
Bse8I GATNNNNATC 1 cut(s) 1304
BseBI CCWGG 2 cut(s) 65, 116
BseCI ATCGAT 1 cut(s) 1528
BseDI CCNNGG 4 cut(s) 114, 115, 290, 839
BseGI GGATG 4 cut(s) 670, 928, 1234, 1270
BseJI GATNNNNATC 1 cut(s) 1304
BseLI CCNNNNNNNGG 5 cut(s) 36, 100, 160, 661, 1368
BseMI GCAATG 2 cut(s) 582, 711
BseMII CTCAG 8 cut(s) 173, 726, 968, 1002, 1067, 1337, 1404, 1503
BseNI ACTGG 6 cut(s) 396, 999, 1181, 1194, 1266, 1488
BseSI GKGCMC 1 cut(s) 595
BseX3I CGGCCG 1 cut(s) 151
BseXI GCAGC 2 cut(s) 308, 1444
BseYI CCCAGC 3 cut(s) 542, 587, 1353
Bsh1236I CGCG 2 cut(s) 242, 408
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 8 cut(s) 63, 89, 93, 105, 120, 153, 1002, 1030
BshNI GGYRCC 1 cut(s) 394
BshVI ATCGAT 1 cut(s) 1528
BsiEI CGRYCG 1 cut(s) 154
BsiHKCI CYCGRG 2 cut(s) 131, 840
BsiSI CCGG 5 cut(s) 78, 90, 150, 191, 725
BslFI GGGAC 4 cut(s) 97, 492, 1158, 1384
BslI CCNNNNNNNGG 5 cut(s) 36, 100, 160, 661, 1368
BsmAI GTCTC 3 cut(s) 566, 1007, 1508
BsmBI CGTCTC 1 cut(s) 1508
BsmFI GGGAC 4 cut(s) 97, 492, 1158, 1384
BsmI GAATGC 2 cut(s) 697, 1459
BsnI GGCC 8 cut(s) 63, 89, 93, 105, 120, 153, 1002, 1030
BsoBI CYCGRG 2 cut(s) 131, 840
Bsp1286I GDGCHC 3 cut(s) 30, 595, 1103
Bsp1407I TGTACA 1 cut(s) 221
Bsp143I GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
BspACI CCGC 5 cut(s) 154, 177, 860, 1129, 1460
BspANI GGCC 8 cut(s) 63, 89, 93, 105, 120, 153, 1002, 1030
BspCNI CTCAG 8 cut(s) 172, 727, 969, 1003, 1066, 1336, 1403, 1504
BspDI ATCGAT 1 cut(s) 1528
BspFNI CGCG 2 cut(s) 242, 408
BspHI TCATGA 1 cut(s) 141
BspLI GGNNCC 6 cut(s) 396, 1003, 1029, 1174, 1335, 1426
BspPI GGATC 2 cut(s) 171, 564
BspQI GCTCTTC 3 cut(s) 264, 493, 1091
BspT107I GGYRCC 1 cut(s) 394
BsrDI GCAATG 2 cut(s) 582, 711
BsrFI RCCGGY 1 cut(s) 89
BsrGI TGTACA 1 cut(s) 221
BsrI ACTGG 6 cut(s) 396, 999, 1181, 1194, 1266, 1488
BssAI RCCGGY 1 cut(s) 89
BssECI CCNNGG 4 cut(s) 114, 115, 290, 839
BssMI GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
BssNI GRCGYC 1 cut(s) 1517
BssT1I CCWWGG 1 cut(s) 290
Bst2UI CCWGG 2 cut(s) 65, 116
Bst4CI ACNGT 4 cut(s) 278, 379, 805, 899
Bst6I CTCTTC 4 cut(s) 264, 493, 1091, 1248
BstACI GRCGYC 1 cut(s) 1517
BstAPI GCANNNNNTGC 2 cut(s) 302, 623
BstAUI TGTACA 1 cut(s) 221
BstC8I GCNNGC 3 cut(s) 26, 91, 1317
BstF5I GGATG 4 cut(s) 670, 928, 1234, 1270
BstFNI CGCG 2 cut(s) 242, 408
BstH2I RGCGCY 1 cut(s) 1412
BstHHI GCGC 2 cut(s) 408, 1411
BstKTI GATC 6 cut(s) 57, 166, 559, 661, 1308, 1528
BstMAI GTCTC 3 cut(s) 566, 1007, 1508
BstMBI GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 8 cut(s) 69, 254, 302, 392, 623, 701, 1499, 1508
BstNI CCWGG 2 cut(s) 65, 116
BstNSI RCATGY 3 cut(s) 469, 859, 1319
BstPAI GACNNNNGTC 1 cut(s) 1376
BstSCI CCNGG 2 cut(s) 63, 114
BstSFI CTRYAG 1 cut(s) 509
BstSLI GKGCMC 1 cut(s) 595
BstUI CGCG 2 cut(s) 242, 408
BstV1I GCAGC 2 cut(s) 308, 1444
BstV2I GAAGAC 2 cut(s) 259, 858
BstX2I RGATCY 1 cut(s) 556
BstXI CCANNNNNNTGG 1 cut(s) 1076
BstYI RGATCY 1 cut(s) 556
BstZI CGGCCG 1 cut(s) 151
Bsu15I ATCGAT 1 cut(s) 1528
Bsu36I CCTNAGG 1 cut(s) 159
BsuRI GGCC 8 cut(s) 63, 89, 93, 105, 120, 153, 1002, 1030
BsuTUI ATCGAT 1 cut(s) 1528
BtgZI GCGATG 1 cut(s) 263
BtsCI GGATG 4 cut(s) 670, 928, 1234, 1270
BtsIMutI CAGTG 4 cut(s) 389, 686, 974, 1495
Cac8I GCNNGC 3 cut(s) 26, 91, 1317
CaiI CAGNNNCTG 1 cut(s) 211
CciI TCATGA 1 cut(s) 141
CfoI GCGC 2 cut(s) 408, 1411
Cfr10I RCCGGY 1 cut(s) 89
Cfr13I GGNCC 6 cut(s) 103, 118, 136, 1001, 1028, 1172
ClaI ATCGAT 1 cut(s) 1528
Csp6I GTAC 2 cut(s) 222, 360
CviQI GTAC 2 cut(s) 222, 360
DpnI GATC 6 cut(s) 56, 165, 558, 660, 1307, 1527
DpnII GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 2 cut(s) 87, 151
EagI CGGCCG 1 cut(s) 151
Eam1104I CTCTTC 4 cut(s) 264, 493, 1091, 1248
EarI CTCTTC 4 cut(s) 264, 493, 1091, 1248
EclXI CGGCCG 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 290
Eco24I GRGCYC 2 cut(s) 30, 1103
Eco32I GATATC 1 cut(s) 1401
Eco47I GGWCC 2 cut(s) 136, 1172
Eco52I CGGCCG 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 1232, 1527
Eco81I CCTNAGG 1 cut(s) 159
Eco88I CYCGRG 2 cut(s) 131, 840
EcoO109I RGGNCCY 1 cut(s) 136
EcoRI GAATTC 1 cut(s) 1345
EcoRII CCWGG 2 cut(s) 63, 114
EcoRV GATATC 1 cut(s) 1401
EcoT14I CCWWGG 1 cut(s) 290
EcoT22I ATGCAT 3 cut(s) 649, 1317, 1321
EcoT38I GRGCYC 2 cut(s) 30, 1103
ErhI CCWWGG 1 cut(s) 290
Esp3I CGTCTC 1 cut(s) 1508
FaqI GGGAC 4 cut(s) 97, 492, 1158, 1384
FbaI TGATCA 1 cut(s) 54
FblI GTMKAC 1 cut(s) 126
Fnu4HI GCNGC 6 cut(s) 154, 177, 297, 860, 1130, 1458
FokI GGATG 4 cut(s) 677, 935, 1241, 1277
FriOI GRGCYC 2 cut(s) 30, 1103
FseI GGCCGGCC 1 cut(s) 93
Fsp4HI GCNGC 6 cut(s) 154, 177, 297, 860, 1130, 1458
FspBI CTAG 1 cut(s) 965
GlaI GCGC 2 cut(s) 407, 1410
GluI GCNGC 6 cut(s) 154, 177, 297, 860, 1130, 1458
GsaI CCCAGC 3 cut(s) 546, 591, 1357
HaeII RGCGCY 1 cut(s) 1412
HaeIII GGCC 8 cut(s) 63, 89, 93, 105, 120, 153, 1002, 1030
HapII CCGG 5 cut(s) 78, 90, 150, 191, 725
HhaI GCGC 2 cut(s) 408, 1411
Hin1I GRCGYC 1 cut(s) 1517
Hin6I GCGC 2 cut(s) 406, 1409
HinP1I GCGC 2 cut(s) 406, 1409
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HindIII AAGCTT 1 cut(s) 1500
HinfI GANTC 3 cut(s) 631, 1040, 1442
HpaII CCGG 5 cut(s) 78, 90, 150, 191, 725
HphI GGTGA 3 cut(s) 25, 208, 1341
Hpy166II GTNNAC 4 cut(s) 127, 224, 360, 523
Hpy188I TCNGA 6 cut(s) 850, 888, 1045, 1056, 1086, 1507
Hpy8I GTNNAC 4 cut(s) 127, 224, 360, 523
Hpy99I CGWCG 3 cut(s) 10, 128, 1417
HpyAV CCTTC 6 cut(s) 500, 883, 1125, 1347, 1361, 1368
HpyCH4III ACNGT 4 cut(s) 278, 379, 805, 899
HpyCH4IV ACGT 1 cut(s) 1517
HpyCH4V TGCA 5 cut(s) 617, 647, 668, 1315, 1319
HpyF10VI GCNNNNNNNGC 8 cut(s) 69, 254, 302, 392, 623, 701, 1499, 1508
HpySE526I ACGT 1 cut(s) 1517
Hsp92I GRCGYC 1 cut(s) 1517
HspAI GCGC 2 cut(s) 406, 1409
KroI GCCGGC 1 cut(s) 89
KroNI GCCGGC 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 54
Kzo9I GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
LguI GCTCTTC 3 cut(s) 264, 493, 1091
LmnI GCTCC 1 cut(s) 1339
Lsp1109I GCAGC 2 cut(s) 308, 1444
LweI GCATC 6 cut(s) 217, 613, 655, 980, 1328, 1458
MaeI CTAG 1 cut(s) 965
MaeII ACGT 1 cut(s) 1517
MaeIII GTNAC 4 cut(s) 13, 313, 805, 893
MalI GATC 6 cut(s) 56, 165, 558, 660, 1307, 1527
MboI GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
MboII GAAGA 9 cut(s) 251, 259, 404, 510, 809, 863, 1108, 1238, 1265
MfeI CAATTG 1 cut(s) 599
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 3 cut(s) 30, 595, 1103
MluCI AATT 8 cut(s) 444, 599, 753, 834, 881, 1034, 1215, 1345
MluI ACGCGT 1 cut(s) 240
MlyI GAGTC 2 cut(s) 625, 1436
MmeI TCCRAC 1 cut(s) 1189
Mph1103I ATGCAT 3 cut(s) 649, 1317, 1321
MroNI GCCGGC 1 cut(s) 89
MroXI GAANNNNTTC 1 cut(s) 1245
MseI TTAA 4 cut(s) 230, 876, 1122, 1302
MslI CAYNNNNRTG 2 cut(s) 534, 1074
MspA1I CMGCKG 2 cut(s) 299, 1010
MspI CCGG 5 cut(s) 78, 90, 150, 191, 725
MspR9I CCNGG 2 cut(s) 65, 116
MunI CAATTG 1 cut(s) 599
Mva1269I GAATGC 2 cut(s) 697, 1459
MvaI CCWGG 2 cut(s) 65, 116
MvnI CGCG 2 cut(s) 242, 408
MwoI GCNNNNNNNGC 8 cut(s) 69, 254, 302, 392, 623, 701, 1499, 1508
NaeI GCCGGC 1 cut(s) 91
NdeII GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
NgoMIV GCCGGC 1 cut(s) 89
NlaIV GGNNCC 6 cut(s) 396, 1003, 1029, 1174, 1335, 1426
NmuCI GTSAC 3 cut(s) 13, 313, 893
NsiI ATGCAT 3 cut(s) 649, 1317, 1321
NspI RCATGY 3 cut(s) 469, 859, 1319
PaeI GCATGC 1 cut(s) 1319
PaeR7I CTCGAG 1 cut(s) 131
PagI TCATGA 1 cut(s) 141
PasI CCCWGGG 1 cut(s) 115
PciI ACATGT 1 cut(s) 465
PciSI GCTCTTC 3 cut(s) 264, 493, 1091
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 2 cut(s) 697, 1459
PdiI GCCGGC 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 1245
PfeI GAWTC 1 cut(s) 1040
PflMI CCANNNNNTGG 1 cut(s) 36
PkrI GCNGC 6 cut(s) 155, 178, 298, 861, 1131, 1459
PleI GAGTC 2 cut(s) 625, 1436
PpsI GAGTC 2 cut(s) 625, 1436
PpuMI RGGWCCY 1 cut(s) 136
PscI ACATGT 1 cut(s) 465
PshAI GACNNNNGTC 1 cut(s) 1376
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 2 cut(s) 63, 114
PspFI CCCAGC 3 cut(s) 542, 587, 1353
PspGI CCWGG 2 cut(s) 63, 114
PspN4I GGNNCC 6 cut(s) 396, 1003, 1029, 1174, 1335, 1426
PspPI GGNCC 6 cut(s) 103, 118, 136, 1001, 1028, 1172
PspPPI RGGWCCY 1 cut(s) 136
PspXI VCTCGAGB 1 cut(s) 131
PstNI CAGNNNCTG 1 cut(s) 211
PsuI RGATCY 1 cut(s) 556
PvuII CAGCTG 2 cut(s) 299, 1010
RigI GGCCGGCC 1 cut(s) 93
RsaI GTAC 2 cut(s) 223, 361
RsaNI GTAC 2 cut(s) 222, 360
RseI CAYNNNNRTG 2 cut(s) 534, 1074
SalI GTCGAC 1 cut(s) 125
SapI GCTCTTC 3 cut(s) 264, 493, 1091
SaqAI TTAA 4 cut(s) 230, 876, 1122, 1302
SatI GCNGC 6 cut(s) 154, 177, 297, 860, 1130, 1458
Sau3AI GATC 6 cut(s) 54, 163, 556, 658, 1305, 1525
Sau96I GGNCC 6 cut(s) 103, 118, 136, 1001, 1028, 1172
SchI GAGTC 2 cut(s) 625, 1436
ScrFI CCNGG 2 cut(s) 65, 116
SduI GDGCHC 3 cut(s) 30, 595, 1103
SfaNI GCATC 6 cut(s) 217, 613, 655, 980, 1328, 1458
SfcI CTRYAG 1 cut(s) 509
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 2 cut(s) 136, 1172
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 2 cut(s) 534, 1074
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SphI GCATGC 1 cut(s) 1319
Sse9I AATT 8 cut(s) 444, 599, 753, 834, 881, 1034, 1215, 1345
SsiI CCGC 5 cut(s) 154, 177, 860, 1129, 1460
SspMI CTAG 1 cut(s) 965
StyD4I CCNGG 2 cut(s) 63, 114
StyI CCWWGG 1 cut(s) 290
TaaI ACNGT 4 cut(s) 278, 379, 805, 899
TaiI ACGT 1 cut(s) 1520
TaqI TCGA 3 cut(s) 126, 132, 1528
TasI AATT 8 cut(s) 444, 599, 753, 834, 881, 1034, 1215, 1345
TatI WGTACW 2 cut(s) 221, 359
TauI GCSGC 4 cut(s) 156, 179, 862, 1132
TfiI GAWTC 1 cut(s) 1040
Tru1I TTAA 4 cut(s) 230, 876, 1122, 1302
Tru9I TTAA 4 cut(s) 230, 876, 1122, 1302
TscAI CASTG 4 cut(s) 396, 693, 981, 1495
TseFI GTSAC 3 cut(s) 13, 313, 893
TseI GCWGC 2 cut(s) 296, 1457
Tsp45I GTSAC 3 cut(s) 13, 313, 893
TspDTI ATGAA 6 cut(s) 158, 518, 894, 1002, 1134, 1281
TspGWI ACGGA 3 cut(s) 23, 301, 1430
TspRI CASTG 4 cut(s) 396, 693, 981, 1495
Van91I CCANNNNNTGG 1 cut(s) 36
VpaK11BI GGWCC 2 cut(s) 136, 1172
XapI RAATTY 3 cut(s) 834, 881, 1345
XceI RCATGY 3 cut(s) 469, 859, 1319
XhoI CTCGAG 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 126
XmnI GAANNNNTTC 1 cut(s) 1245
XspI CTAG 1 cut(s) 965
ZraI GACGTC 1 cut(s) 1518
Zsp2I ATGCAT 3 cut(s) 649, 1317, 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.