Rorug06G0300600

Leucine carboxyl methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
45253469 .. 45259326
5858 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0300600.1

Sequence Viewer

Length: 3663 bp
ATGGAGGAAGACGAAGATAGGATTTTGCTGAGCAGCTTGGGCGTCACGTCGGCCAATCCCGAAGATATTGAGAGGGACATTCTATCTGAGGCAAAGAATAATGGCAATGCCGGTAACATTGGTGAGGCTGGAGGGAGCAATGAGGAGGAGGAGTTGGGGGAGAAACCGGAGAGTGTTGACCCATCCGCGGCCAGCCACGCCAAACTCTATAACAAATTGAGGGCTGTTGAGTTTGAAATCGATGCGGTGGCATCCACTGTCGAGCATGAACAAGGCGGGAATGAAGATGGCATTGGTCATGGTGGTGATGGCGAGGAAGGGGTGGATATGGAGGATAATGTCGAGGCTTCTGATAACCTTCAGCATGCTTTGGCCACTGATAGACTACGGAGTCTGAAGAAAACAAAGGCTCAACTTGAGAAAGAGCTTTCGGACTTGGGCAAGCAAAGACCTTCTAAGGGTATTGATGAGCTTGACAGAGTCTTGTCTAATATTGTCAAGGAAAAGCCTGCACCCAAGAGGAAGTTGAAACAGGTTCAGAAGTCTGGCAAAAAACAAGAAAAGCGGGTTAAAACAGTCTCATTTGATGAGGATGATGATTTTGATGCCGTGTTGGATGCAGCCTCCACGGGGTTTGTTGAAACGGAAAGAGATGAATTAGTTCGAAAAGGGATCTTAACTCCTTTCCATAAACTAAAGGGCTTTGAACGCCGCCTTCAAGATGGAGGGCCATCTCAGAGGCATAACGATCCCGCAGAAGAAGACAGAAATGATGATTTGTTTTCAGCCAGTGTTGCTAGAGCAGCCCAATCAATATCAAAGGCTGCACAAGCCCGCCCAACTACAAAGCTGCTTGATTCGGAAGCTCTACCAAGGCTTGAGGCCGCCACCTATCCTTTCCAGAGGCTAAGGAAACCTCTGAAAATCCCCCAATCCCTTGAAAATGATACACAGAAGAACAAAAAATCAGGAACAAGAAGGAAGCGTCCTTTGCCTGAGAAGCGATGGAGAAATCGCATTTCTCTTGAGGAAATGAATTTGAACGGAAATGAGGTGAGCACCCCCAGGGAAGAAGAAAACCAGGAAGATACTGGAGATGTAGATGATGATGAGTATCCTCATGTTACCCTTGAAGGTGGCTTGAAAATCCCTGAGTACATTTTTGAACAACTTTTTGACTATCAAAAAGTAGGGGTCCAGTGGCTCTGGGAATTGCATTGCCAAAAAGCAGGTGGAATCATTGGAGATGAGATGGGTCTTGGTAAAACCATCCAGGTCTTATCTTTCCTTGGTGCACTGCATTTCAGTCGTATGTACAAACCAAGCATTATTGTATGCCCAGTTACACTATTGCGACAATGGAGAAGGGAGGCTAAGAAATGGTACCCAAGCTTTCATGTGGAGTTACTTCATGATTCTGCTCAGGACTCAAGTAATAGAAAAAAACAATATAAATCTTCTGGAAGTGATTCTGATAGTGAAGGTTCACTGGATAGTGATTATGAGAGACCTGTATCATCCAAAGGTGCCAAAAAATGGGATGCCTTGATAAATCGTGTTTTGAGGTCAGAATCTGGGTTGCTTATTACAACTTATGAGCAACTTCGTATCGTTGGGGAAAAATTGCTGGACGTTGACTGGGGTTATGCAGTTTTGGATGAAGGACACCGAATTCGGAATCCAAACGCAGAAATTACTCTAGTTTGTAAACAGTTACAAACAGTACACCGTATTATCATGACGGGTGCCCCAATTCAGAACAAGCTGACTGAACTGTGGTCCTTGTTTGATTTTGTCTTCCCTGGAAAGTTGGGGGTTTTGCCCATATTTGAGGCTGAGTTTGCCGTTCCCATATCTGTTGGCGGTTATGCGAATGCTTCACCGTTACAAGTATCCACAGCTTACAGGTGTGCTGTGGTTCTGCGAGATCTGATCATGCCGTATCTCCTCCGGCGCATGAAGGCTGATGTGAATGCACATCTTCCTAAGAAGACTGAACATGTCATCTTTTGCAGCCTCACCACTGAGCAACGATCTACATATAGAGCTTTTCTTGCCAGCTCTGATGTGGAACAGATTTTGGACGGCAATAGGAATTCACTTTATGGAATTGATGTGATGCGTAAAATTTGCAACCACCCTGATCTGCTTGAGAGGGAACATGCTGGCCAGAATCCTGATTATGGGAATCCTGAGCGCAGTGGGAAAATGAAAGTTATTGCCCAAGTTCTTAAAGCTTGGAAGGAGCAAGGTCATCGTGTTCTTCTATTTACGCAAACCCAACAAATGCTTGACATTATTGAAAGTTTTCTGGTCGCTGGTGAATATAGCTACAGAAGGATGGATGGTCTGACTGCCATCAAACACAGAATGGCCTTAATAGATGAATTTAACAACTCAAATGATGTGTTTATTTTCATCCTTACGACTAAAGTAGGAGGTCTAGGGACAAATTTGACAGGTGCAAATAGGGTGCTCATCTTTGACCCTGACTGGAACCCTTCAACTGACATGCAGGCCAGGGAGCGTGCTTGGCGTATTGGTCAGAAGCGGGACGTAACTATATATAGATTGATTACTCGTGGAACTATAGAAGAGAAGGTGTATCATAGACAGATTTACAAACATTTTCTCACGAATAAGATATTGAAAAACCCCCAGCAGAGAAGGTTCTTTAAAGCTCGAGATATGAAGGATCTCTTCATTCTGAATGATGAGGGAGACAGTGGGGCTACTGAAACAGCTAATATATTTGGGCAGTTATCTGAAGATGCCAATGTTGTTTGTGCTCAGAAAGATGACCACAGTACGCGAGGGTCTAAGAAAGTTACTGTACCATATGCCAATGCTTCTGCTGGCAAAAGAAAGAACTCTGAGATTGAATCATCAAGGAGAAATGGAAAAGAAAAAGCTGATCACAGTGAGGGCGATGTGGACGAAGAAACAAATATTCTGAAGTGTCTTTTTGACACGCAAGGGATCCATAGTGCTATGAACCATGATGTGATCATGAATGCCCATGATGAAGAGAAGATGAGGCTTGAGGAGCAAGCTTCCCAAGTTGCACAAAGAGCAGCAGAAGCATTGCGCCATTCACGAATGCTTCGGAGCCGTGACAGTGTATCTGTCCCCACATGGACTGGGAAATCAGGAATGGCAGGTGCACCATCAGCTGTCCGTGGGAAATTTGGTTCTACTGTGAATTCCCGATTGATAAGTAATACCAAACCCTCCGCTGAAGTTTCCAACAGTAGAACAAATGGGTTCGTGGCTGGGGCATCTGCTGGGAAGGCATTATCTTCTGCTGAATTACTAGCAAGAATTCGAGGAAACCAGGAAAAAGCTGTTGAAGCTGGAATTGAGCAACAGTTTGGGATGGCTTCTAGTTCTTCTAGCAGAGGAAAAGCCGTGGATGCTGGGCCTTCTAGGCAGTCACAGAACTTGGGTGGAGTGCCACCTGAAGTACTGATTCGTAAGATCTGTACATTCCTCCAAGAAAGACGTGGAAGTACGAATTCTGCCACAATAGTGCAGCATTTTAAGGATAGAATACCCTCAAAAGATCTTCCCTTGTTTAAGAATCTTTTGAAGGAAATAGCAAAGCTAGAGAAAACCCCGAGCGGATCAGTTTGGGTTCTAAAGCCAGAGTTTCATCAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1220

Amino Acids

136.52

Weight (kDa)

6.69

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 394 - 716 4.9e-78 SNF2-related domain
Helicase_C PF00271 736 - 848 1.5e-23 Helicase conserved C-terminal domain
WHD_Rad26_CSB PF25875 1155 - 1218 3.3e-14 Rad26/CSB winged helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1220, 3149
AasI GACNNNNNNGTC 1 cut(s) 390
Acc36I ACCTGC 2 cut(s) 1220, 3149
Acc65I GGTACC 1 cut(s) 1383
AccB1I GGYRCC 3 cut(s) 1383, 1526, 1745
AccB7I CCANNNNNTGG 1 cut(s) 1536
AccBSI CCGCTC 1 cut(s) 3621
AccII CGCG 2 cut(s) 188, 2812
AclWI GGATC 6 cut(s) 680, 743, 2703, 2974, 2987, 3631
AcoI YGGCCR 4 cut(s) 51, 189, 372, 2167
AcuI CTGAAG 6 cut(s) 344, 416, 2787, 2975, 3258, 3480
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 9 cut(s) 1157, 1316, 1385, 1725, 2809, 2835, 3465, 3484, 3511
AfiI CCNNNNNNNGG 5 cut(s) 187, 458, 630, 1536, 2183
AflIII ACRYGT 1 cut(s) 1999
AjiI CACGTC 2 cut(s) 48, 3503
AjnI CCWGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
AjuI GAANNNNNNNTTGG 2 cut(s) 276, 308
AleI CACNNNNGTG 1 cut(s) 3527
AloI GAACNNNNNNTCC 2 cut(s) 3175, 3207
Alw21I GWGCWC 5 cut(s) 1061, 1297, 2478, 2791, 3166
Alw26I GTCTC 3 cut(s) 583, 1501, 2715
Alw44I GTGCAC 2 cut(s) 1293, 3162
AlwI GGATC 6 cut(s) 680, 743, 2703, 2974, 2987, 3631
AlwNI CAGNNNCTG 1 cut(s) 1574
Ama87I CYCGRG 2 cut(s) 2682, 3616
AoxI GGCC 9 cut(s) 51, 189, 372, 728, 882, 2167, 2373, 2517, 3419
ApaLI GTGCAC 2 cut(s) 1293, 3162
ApeKI GCWGC 8 cut(s) 33, 620, 803, 824, 850, 2013, 3074, 3532
ArsI GACNNNNNNTTYG 2 cut(s) 1656, 1688
Asp700I GAANNNNTTC 3 cut(s) 660, 1468, 2307
Asp718I GGTACC 1 cut(s) 1383
AspLEI GCGC 3 cut(s) 1956, 2199, 3090
AspS9I GGNCC 4 cut(s) 728, 1195, 1779, 3419
AsuHPI GGTGA 6 cut(s) 134, 317, 1066, 1872, 2011, 2333
AsuII TTCGAA 1 cut(s) 664
AvaI CYCGRG 2 cut(s) 2682, 3616
AvaII GGWCC 2 cut(s) 1195, 1779
BaeGI GKGCMC 3 cut(s) 1297, 1750, 3166
BalI TGGCCA 2 cut(s) 374, 2169
BamHI GGATCC 1 cut(s) 2979
BanI GGYRCC 3 cut(s) 1383, 1526, 1745
BauI CACGAG 1 cut(s) 2580
BbsI GAAGAC 4 cut(s) 15, 768, 1789, 1997
Bbv12I GWGCWC 5 cut(s) 1061, 1297, 2478, 2791, 3166
BbvI GCAGC 8 cut(s) 45, 632, 811, 815, 837, 2025, 3086, 3544
BceAI ACGGC 6 cut(s) 593, 1829, 1924, 2101, 3096, 3392
BcgI CGANNNNNNTGC 4 cut(s) 1289, 1323, 2237, 2271
BciT130I CCWGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
BciVI GTATCC 2 cut(s) 1125, 1903
BclI TGATCA 3 cut(s) 1932, 2914, 3006
BcoDI GTCTC 3 cut(s) 583, 1501, 2715
BfaI CTAG 8 cut(s) 798, 1700, 2444, 3314, 3384, 3393, 3426, 3605
BfmI CTRYAG 2 cut(s) 2332, 2589
BfuAI ACCTGC 2 cut(s) 1220, 3149
BfuI GTATCC 2 cut(s) 1125, 1903
BglI GCCNNNNNGGC 1 cut(s) 3427
BglII AGATCT 3 cut(s) 1927, 3477, 3562
BlpI GCTNAGC 1 cut(s) 29
BmcAI AGTACT 1 cut(s) 3465
Bme1390I CCNGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
Bme18I GGWCC 2 cut(s) 1195, 1779
BmeT110I CYCGRG 2 cut(s) 2682, 3616
BmgBI CACGTC 2 cut(s) 48, 3503
BmgT120I GGNCC 4 cut(s) 728, 1195, 1779, 3419
BmiI GGNNCC 7 cut(s) 1196, 1385, 1528, 1747, 2498, 2981, 3110
BmrFI CCNGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
BmrI ACTGGG 3 cut(s) 1334, 1648, 3150
BmsI GCATC 9 cut(s) 232, 260, 595, 607, 1531, 2109, 2761, 3287, 3403
BmuI ACTGGG 3 cut(s) 1334, 1648, 3150
BpiI GAAGAC 4 cut(s) 15, 768, 1789, 1997
BpmI CTGGAG 2 cut(s) 150, 1113
Bpu10I CCTNAGC 3 cut(s) 908, 1422, 2193
Bpu1102I GCTNAGC 1 cut(s) 29
Bpu14I TTCGAA 1 cut(s) 664
BpuEI CTTGAG 6 cut(s) 437, 899, 1046, 1414, 2171, 3062
Bsa29I ATCGAT 1 cut(s) 240
BsaBI GATNNNNATC 1 cut(s) 1113
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 1501
BsaWI WCCGGW 1 cut(s) 166
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
Bsc4I CCNNNNNNNGG 5 cut(s) 187, 458, 630, 1536, 2183
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 8 cut(s) 789, 1096, 1198, 1340, 1494, 1643, 2498, 3145
Bse3DI GCAATG 4 cut(s) 112, 145, 1216, 3083
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
BseCI ATCGAT 1 cut(s) 240
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 5 cut(s) 187, 458, 630, 1536, 2183
BseMI GCAATG 4 cut(s) 112, 145, 1216, 3083
BseNI ACTGG 8 cut(s) 789, 1096, 1198, 1340, 1494, 1643, 2498, 3145
BseRI GAGGAG 5 cut(s) 158, 161, 164, 1937, 3059
BseSI GKGCMC 3 cut(s) 1297, 1750, 3166
BseXI GCAGC 8 cut(s) 45, 632, 811, 815, 837, 2025, 3086, 3544
BseYI CCCAGC 4 cut(s) 2658, 3272, 3284, 3416
BsgI GTGCAG 3 cut(s) 495, 810, 3551
Bsh1236I CGCG 2 cut(s) 188, 2812
BshFI GGCC 9 cut(s) 53, 191, 374, 730, 884, 2169, 2375, 2519, 3421
BshNI GGYRCC 3 cut(s) 1383, 1526, 1745
BshVI ATCGAT 1 cut(s) 240
BsiHKAI GWGCWC 5 cut(s) 1061, 1297, 2478, 2791, 3166
BsiHKCI CYCGRG 2 cut(s) 2682, 3616
BsiSI CCGG 3 cut(s) 111, 167, 1951
BslFI GGGAC 4 cut(s) 89, 2461, 2567, 3113
BslI CCNNNNNNNGG 5 cut(s) 187, 458, 630, 1536, 2183
BsmAI GTCTC 3 cut(s) 583, 1501, 2715
BsmFI GGGAC 4 cut(s) 89, 2461, 2567, 3113
BsmI GAATGC 4 cut(s) 1879, 1978, 3019, 3105
BsnI GGCC 9 cut(s) 53, 191, 374, 730, 884, 2169, 2375, 2519, 3421
Bso31I GGTCTC 1 cut(s) 1501
BsoBI CYCGRG 2 cut(s) 2682, 3616
Bsp119I TTCGAA 1 cut(s) 664
Bsp1286I GDGCHC 6 cut(s) 1061, 1297, 1750, 2478, 2791, 3166
Bsp1407I TGTACA 2 cut(s) 1314, 3482
Bsp1720I GCTNAGC 1 cut(s) 29
BspANI GGCC 9 cut(s) 53, 191, 374, 730, 884, 2169, 2375, 2519, 3421
BspDI ATCGAT 1 cut(s) 240
BspFNI CGCG 2 cut(s) 188, 2812
BspHI TCATGA 3 cut(s) 1411, 1737, 3009
BspLI GGNNCC 7 cut(s) 1196, 1385, 1528, 1747, 2498, 2981, 3110
BspMI ACCTGC 2 cut(s) 1220, 3149
BspPI GGATC 6 cut(s) 680, 743, 2703, 2974, 2987, 3631
BspT104I TTCGAA 1 cut(s) 664
BspT107I GGYRCC 3 cut(s) 1383, 1526, 1745
BspTNI GGTCTC 1 cut(s) 1501
BsrBI CCGCTC 1 cut(s) 3621
BsrDI GCAATG 4 cut(s) 112, 145, 1216, 3083
BsrFI RCCGGY 1 cut(s) 110
BsrGI TGTACA 2 cut(s) 1314, 3482
BsrI ACTGG 8 cut(s) 789, 1096, 1198, 1340, 1494, 1643, 2498, 3145
BssAI RCCGGY 1 cut(s) 110
BssNI GRCGYC 1 cut(s) 42
BssSI CACGAG 1 cut(s) 2580
BssT1I CCWWGG 2 cut(s) 872, 1288
Bst2BI CACGAG 1 cut(s) 2580
Bst2UI CCWGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
Bst6I CTCTTC 3 cut(s) 2589, 2705, 3021
BstACI GRCGYC 1 cut(s) 42
BstAUI TGTACA 2 cut(s) 1314, 3482
BstBI TTCGAA 1 cut(s) 664
BstDSI CCRYGG 4 cut(s) 186, 627, 3178, 3408
BstFNI CGCG 2 cut(s) 188, 2812
BstHHI GCGC 3 cut(s) 1956, 2199, 3090
BstMAI GTCTC 3 cut(s) 583, 1501, 2715
BstNI CCWGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
BstNSI RCATGY 4 cut(s) 368, 2003, 2165, 2515
BstSCI CCNGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
BstSFI CTRYAG 2 cut(s) 2332, 2589
BstSLI GKGCMC 3 cut(s) 1297, 1750, 3166
BstUI CGCG 2 cut(s) 188, 2812
BstV1I GCAGC 8 cut(s) 45, 632, 811, 815, 837, 2025, 3086, 3544
BstV2I GAAGAC 4 cut(s) 15, 768, 1789, 1997
BstX2I RGATCY 6 cut(s) 672, 1927, 2695, 2979, 3477, 3562
BstYI RGATCY 6 cut(s) 672, 1927, 2695, 2979, 3477, 3562
Bsu15I ATCGAT 1 cut(s) 240
BsuI GTATCC 2 cut(s) 1125, 1903
BsuRI GGCC 9 cut(s) 53, 191, 374, 730, 884, 2169, 2375, 2519, 3421
BsuTUI ATCGAT 1 cut(s) 240
BtgI CCRYGG 4 cut(s) 186, 627, 3178, 3408
BtgZI GCGATG 2 cut(s) 1018, 2943
BtrI CACGTC 2 cut(s) 48, 3503
BtsI GCAGTG 2 cut(s) 1295, 2206
BveI ACCTGC 2 cut(s) 1220, 3149
CaiI CAGNNNCTG 1 cut(s) 1574
CciI TCATGA 3 cut(s) 1411, 1737, 3009
CfoI GCGC 3 cut(s) 1956, 2199, 3090
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 4 cut(s) 728, 1195, 1779, 3419
Cfr42I CCGCGG 1 cut(s) 189
ClaI ATCGAT 1 cut(s) 240
CseI GACGC 2 cut(s) 31, 974
Csp6I GTAC 9 cut(s) 1156, 1315, 1384, 1724, 2808, 2834, 3464, 3483, 3510
CspCI CAANNNNNGTGG 2 cut(s) 616, 651
CviQI GTAC 9 cut(s) 1156, 1315, 1384, 1724, 2808, 2834, 3464, 3483, 3510
DraI TTTAAA 1 cut(s) 2677
DrdI GACNNNNNNGTC 1 cut(s) 390
DseDI GACNNNNNNGTC 1 cut(s) 390
EaeI YGGCCR 4 cut(s) 51, 189, 372, 2167
Eam1104I CTCTTC 3 cut(s) 2589, 2705, 3021
EarI CTCTTC 3 cut(s) 2589, 2705, 3021
Eco130I CCWWGG 2 cut(s) 872, 1288
Eco31I GGTCTC 1 cut(s) 1501
Eco47I GGWCC 2 cut(s) 1195, 1779
Eco57I CTGAAG 6 cut(s) 344, 416, 2787, 2975, 3258, 3480
Eco88I CYCGRG 2 cut(s) 2682, 3616
EcoRI GAATTC 5 cut(s) 1671, 2095, 3202, 3321, 3514
EcoRII CCWGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
EcoT14I CCWWGG 2 cut(s) 872, 1288
ErhI CCWWGG 2 cut(s) 872, 1288
FalI AAGNNNNNCTT 2 cut(s) 2684, 2716
FaqI GGGAC 4 cut(s) 89, 2461, 2567, 3113
FauI CCCGC 5 cut(s) 269, 558, 760, 842, 2544
FauNDI CATATG 1 cut(s) 2839
FbaI TGATCA 3 cut(s) 1932, 2914, 3006
FspBI CTAG 8 cut(s) 798, 1700, 2444, 3314, 3384, 3393, 3426, 3605
GlaI GCGC 3 cut(s) 1955, 2198, 3089
GsaI CCCAGC 4 cut(s) 2662, 3276, 3288, 3420
GsuI CTGGAG 2 cut(s) 150, 1113
HaeIII GGCC 9 cut(s) 53, 191, 374, 730, 884, 2169, 2375, 2519, 3421
HapII CCGG 3 cut(s) 111, 167, 1951
HgaI GACGC 2 cut(s) 31, 974
HhaI GCGC 3 cut(s) 1956, 2199, 3090
Hin1I GRCGYC 1 cut(s) 42
Hin6I GCGC 3 cut(s) 1954, 2197, 3088
HinP1I GCGC 3 cut(s) 1954, 2197, 3088
HincII GTYRAC 2 cut(s) 178, 1636
HindII GTYRAC 2 cut(s) 178, 1636
HindIII AAGCTT 3 cut(s) 1390, 2235, 3051
HpaII CCGG 3 cut(s) 111, 167, 1951
HphI GGTGA 6 cut(s) 134, 317, 1066, 1872, 2011, 2333
Hpy166II GTNNAC 8 cut(s) 178, 1295, 1487, 1636, 1709, 1726, 2935, 3164
Hpy8I GTNNAC 8 cut(s) 178, 1295, 1487, 1636, 1709, 1726, 2935, 3164
Hpy99I CGWCG 1 cut(s) 52
HpyCH4IV ACGT 4 cut(s) 47, 1632, 2556, 3502
HpySE526I ACGT 4 cut(s) 47, 1632, 2556, 3502
Hsp92I GRCGYC 1 cut(s) 42
HspAI GCGC 3 cut(s) 1954, 2197, 3088
KpnI GGTACC 1 cut(s) 1387
Ksp22I TGATCA 3 cut(s) 1932, 2914, 3006
KspI CCGCGG 1 cut(s) 189
LmnI GCTCC 5 cut(s) 135, 2245, 2524, 3046, 3108
Lsp1109I GCAGC 8 cut(s) 45, 632, 811, 815, 837, 2025, 3086, 3544
LweI GCATC 9 cut(s) 232, 260, 595, 607, 1531, 2109, 2761, 3287, 3403
MaeI CTAG 8 cut(s) 798, 1700, 2444, 3314, 3384, 3393, 3426, 3605
MaeII ACGT 4 cut(s) 47, 1632, 2556, 3502
MbiI CCGCTC 1 cut(s) 3621
MflI RGATCY 6 cut(s) 672, 1927, 2695, 2979, 3477, 3562
MhlI GDGCHC 6 cut(s) 1061, 1297, 1750, 2478, 2791, 3166
MlsI TGGCCA 2 cut(s) 374, 2169
MluNI TGGCCA 2 cut(s) 374, 2169
MlyI GAGTC 3 cut(s) 400, 489, 1421
MmeI TCCRAC 2 cut(s) 594, 3270
Mox20I TGGCCA 2 cut(s) 374, 2169
MroXI GAANNNNTTC 3 cut(s) 660, 1468, 2307
MscI TGGCCA 2 cut(s) 374, 2169
MseI TTAA 8 cut(s) 570, 677, 2232, 2378, 2391, 2676, 3540, 3576
MslI CAYNNNNRTG 2 cut(s) 303, 3527
Msp20I TGGCCA 2 cut(s) 374, 2169
MspA1I CMGCKG 3 cut(s) 188, 3173, 3236
MspI CCGG 3 cut(s) 111, 167, 1951
MspR9I CCNGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
Mva1269I GAATGC 4 cut(s) 1879, 1978, 3019, 3105
MvaI CCWGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
MvnI CGCG 2 cut(s) 188, 2812
NdeI CATATG 1 cut(s) 2839
NlaIV GGNNCC 7 cut(s) 1196, 1385, 1528, 1747, 2498, 2981, 3110
NmuCI GTSAC 3 cut(s) 43, 3113, 3432
NspI RCATGY 4 cut(s) 368, 2003, 2165, 2515
NspV TTCGAA 1 cut(s) 664
OliI CACNNNNGTG 1 cut(s) 3527
PaeI GCATGC 1 cut(s) 368
PaeR7I CTCGAG 1 cut(s) 2682
PagI TCATGA 3 cut(s) 1411, 1737, 3009
PaqCI CACCTGC 2 cut(s) 1220, 3149
PasI CCCWGGG 1 cut(s) 1065
PciI ACATGT 1 cut(s) 1999
PctI GAATGC 4 cut(s) 1879, 1978, 3019, 3105
PdmI GAANNNNTTC 3 cut(s) 660, 1468, 2307
PflFI GACNNNGTC 1 cut(s) 479
PflMI CCANNNNNTGG 1 cut(s) 1536
PleI GAGTC 3 cut(s) 399, 488, 1421
PpsI GAGTC 3 cut(s) 399, 488, 1421
PscI ACATGT 1 cut(s) 1999
Psp6I CCWGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
PspFI CCCAGC 4 cut(s) 2658, 3272, 3284, 3416
PspGI CCWGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
PspN4I GGNNCC 7 cut(s) 1196, 1385, 1528, 1747, 2498, 2981, 3110
PspPI GGNCC 4 cut(s) 728, 1195, 1779, 3419
PstNI CAGNNNCTG 1 cut(s) 1574
PsuI RGATCY 6 cut(s) 672, 1927, 2695, 2979, 3477, 3562
PsyI GACNNNGTC 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 3173
RsaI GTAC 9 cut(s) 1157, 1316, 1385, 1725, 2809, 2835, 3465, 3484, 3511
RsaNI GTAC 9 cut(s) 1156, 1315, 1384, 1724, 2808, 2834, 3464, 3483, 3510
RseI CAYNNNNRTG 2 cut(s) 303, 3527
SacII CCGCGG 1 cut(s) 189
SaqAI TTAA 8 cut(s) 570, 677, 2232, 2378, 2391, 2676, 3540, 3576
Sau96I GGNCC 4 cut(s) 728, 1195, 1779, 3419
ScaI AGTACT 1 cut(s) 3465
SchI GAGTC 3 cut(s) 400, 489, 1421
ScrFI CCNGG 6 cut(s) 1066, 1082, 1274, 1803, 2521, 3335
SduI GDGCHC 6 cut(s) 1061, 1297, 1750, 2478, 2791, 3166
SfaNI GCATC 9 cut(s) 232, 260, 595, 607, 1531, 2109, 2761, 3287, 3403
SfcI CTRYAG 2 cut(s) 2332, 2589
Sfr274I CTCGAG 1 cut(s) 2682
Sfr303I CCGCGG 1 cut(s) 189
SfuI TTCGAA 1 cut(s) 664
SgrBI CCGCGG 1 cut(s) 189
SinI GGWCC 2 cut(s) 1195, 1779
SlaI CTCGAG 1 cut(s) 2682
SmiMI CAYNNNNRTG 2 cut(s) 303, 3527
SmlI CTYRAG 7 cut(s) 416, 878, 1025, 1429, 2150, 2682, 3041
SmoI CTYRAG 7 cut(s) 416, 878, 1025, 1429, 2150, 2682, 3041
SphI GCATGC 1 cut(s) 368
SspI AATATT 2 cut(s) 493, 2950
SspMI CTAG 8 cut(s) 798, 1700, 2444, 3314, 3384, 3393, 3426, 3605
StyD4I CCNGG 6 cut(s) 1064, 1080, 1272, 1801, 2519, 3333
StyI CCWWGG 2 cut(s) 872, 1288
TaiI ACGT 4 cut(s) 50, 1635, 2559, 3505
TaqI TCGA 6 cut(s) 240, 261, 342, 664, 2683, 3325
TatI WGTACW 5 cut(s) 1155, 1314, 1723, 3463, 3482
TauI GCSGC 3 cut(s) 191, 714, 887
Tru1I TTAA 8 cut(s) 570, 677, 2232, 2378, 2391, 2676, 3540, 3576
Tru9I TTAA 8 cut(s) 570, 677, 2232, 2378, 2391, 2676, 3540, 3576
TseFI GTSAC 3 cut(s) 43, 3113, 3432
TseI GCWGC 8 cut(s) 33, 620, 803, 824, 850, 2013, 3074, 3532
Tsp45I GTSAC 3 cut(s) 43, 3113, 3432
TspGWI ACGGA 4 cut(s) 403, 659, 1059, 3167
Tth111I GACNNNGTC 1 cut(s) 479
Van91I CCANNNNNTGG 1 cut(s) 1536
VneI GTGCAC 2 cut(s) 1293, 3162
VpaK11BI GGWCC 2 cut(s) 1195, 1779
XceI RCATGY 4 cut(s) 368, 2003, 2165, 2515
XcmI CCANNNNNNNNNTGG 4 cut(s) 1088, 1229, 2065, 3500
XhoI CTCGAG 1 cut(s) 2682
XmnI GAANNNNTTC 3 cut(s) 660, 1468, 2307
XspI CTAG 8 cut(s) 798, 1700, 2444, 3314, 3384, 3393, 3426, 3605
ZrmI AGTACT 1 cut(s) 3465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.