Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005793

Physical Location & Seq

Genomic Coordinates Forward (+)

37751563 .. 37755683

Gene Structure 4121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0265400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGGCCACCTGAACCTGCCCGCATCGAAGCGGATCCCTCGGAACTGGCGCCTCCTGGACCTGGTCTCGGCGGCCTTCTTCGGCATAGTGATTCTCTTCTTCCTCCTCGTCTTCACCCCCCTGGGCGACTCCATGGCCGCCTCCGGTCGCCAGGCGCTGCTGCTCTCCACCAACGCCGATCCGAAGCAACGACACCGTTTGGTGGCGCTGGTGGAGCAAGGCCAGCACCAGCAGCCCATCGACGCCTGCCCCGCCCACGCCGTCGACCACATGCCCTGCGAGGACCCCAGGCGCAACAGCCAGCTCAGCAGAGAGATGAACTTTTACAGAGAGCGGCATTGCCCTCCGCCGGAGGAGACCCCTCTCTGCTTGATCCCGCCCCCCGACGGGTACAAGATTCCGGTGCCCTGGCCTCAAAGCTTGGAAAAGATATGGCACAGCAACATGCCACACAACAAAATTGCAGAGAGGAAAGGTCATCAGGGATGGATGATGTTGGATGGCCCGCACTTCATTTTCCCTGGTGGCGGCACCATGTTCCCTGATGGAGCTATACAATATATCGAAAAACTTGGACAGTACATCCCTATCAGTGATGGAGTTCTGCGGACTGCTCTTGATATGGGTTGTGGGGTTGCTAGTTTTGGTGGGTATCTTCTGTCCAAAGACATTATAGCAATGTCATTTGCTCCAAGAGACTCGCACAAATCACAGATTCAATTTGCCCTAGAAAGAGGAATTCCAGCATTTTCTCTCATGCTTGGCACTCGCAGACTACCTTTTCCTGCTTTCTCATTTGATTTGGTGCATTGCTCTCGGTGTTTGATCCCATTTACTGCGTACAATGCCACATATTTCCTCGAAGTGGATCGCGTGCTTCGCCCACGAGGATACCTAGTAATCTCTGGTCCTCCTGTACAGTGGGCTAATCAAGACAAGGAATGGGCAGATCTCCAAGGAGTTGCAAGAGCATTGTGTTATGAGCTAATTGCTGTTGATGGAAACACAGCTGTCTGGAAAAAGCCTGCTGGAGATTCATGCCTCCCCAACCAAAATGAATATGGTCTAGAATTGTGTGACGAATCAGATGCCGCAAATGATGCATGGTACGTCAAGTTAAAGAAATGCATGAGTAGGACATCTTCTGTCAAGGGAGAATATGCTGTTGGGATGATTCCAAAATGGCCAGCAAGGCTGACCAAACCTCCTGCAAGGGCCACACTCTTGAGAAATGGCGTTGATGTGTTTGAGGCTGACACTCGACGATGGGCCAGAAGAGTGGCTTACTATAAGAACTCTCTACACCTGAAGCTTGGAACTTCAGCTGTGCGTAACATCATGGACATGAATGCACTTTTTGGAGGTTTTGCTGCTGCACTGATATCTGACCCTGTGTGGGTGATGAATGTTGTTCCTTCTCGCAAGCCTTCTACTCTGTCTGTAATCTACGACCGAGGTCTCATTGGACTCTACCATGATTGGTGTGAGCCTTTCTCAACGTACCCTCGTTCTTATGATTTCATTCATGTAACCGGCATTGAATCACTCATAAAACATCCAAGTACAGGCAAAAACAGATGTAACCTTGTGGATTTGTTGGTGGAGATGGATCGATTCTTGCGTCCTGAAGGAACGGTTGTGATTAGAGACTCTCCTGAAGTTATTGATAAAATAGGTCGCATAGCTCATAACGTAAGGTGGACTGCTAGCATACACGAGAAAGAACCAGAATCACATGGGAGAGAGAAAGTTCTTGTTGCGACCAAAAACTTTTGGAAGTTGCCTTCAGCATCCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nefa_Nip30_N

Protein Analysis

599

Amino Acids

67.34

Weight (kDa)

8.82

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	89 - 589	2e-208	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	206 - 301	4.5e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62140
fragaria_vesca	FvH4_1g26260 FvH4_1g26260 FvH4_1g26260 FvH4_1g26260
malus_domestica	MD17G1284800.v1.1
prunus_persica	Prupe.3G003000_v2.0.a1 Prupe.3G003000_v2.0.a1
pyrus_communis	pycom17g28060
rosa_chinensis	RchiOBHm_Chr3g0485921
rosa_laevigata	RLG00000023122
rosa_multiflora	Rmu_sc0004876.1_g000003 Rmu_sc0008757.1_g000021 Rmu_sc0017529.1_g000001
rosa_roxburghii	Rroxscaffold_4G00297600 Rroxscaffold_6G00396200
rosa_rugosa	Rorug01G0265400 Rorug03G0222500 Rorug03G0222600
rosa_samantha	Rh1CG263400 Rh1DG274400 Rh3AG271800 Rh3BG306900 Rh3CG305500 Rh3DG301500
rosa_wichuraiana	Rw0G015520 Rw1G024840 Rw3G024150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	24
AccB1I	GGYRCC	3 cut(s)	48, 403, 530
AccBSI	CCGCTC	1 cut(s)	334
AccI	GTMKAC	1 cut(s)	264
AccII	CGCG	1 cut(s)	873
AclWI	GGATC	7 cut(s)	28, 41, 173, 367, 820, 876, 1617
AcoI	YGGCCR	2 cut(s)	135, 1184
AcsI	RAATTY	1 cut(s)	738
AcuI	CTGAAG	5 cut(s)	1305, 1328, 1647, 1677, 1770
AcyI	GRCGYC	2 cut(s)	49, 243
AfaI	GTAC	7 cut(s)	392, 581, 842, 918, 1109, 1502, 1564
AgsI	TTSAA	2 cut(s)	719, 1541
AjnI	CCWGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
AjuI	GAANNNNNNNTTGG	2 cut(s)	1149, 1181
AluBI	AGCT	8 cut(s)	304, 420, 551, 985, 1010, 1312, 1325, 1685
AluI	AGCT	8 cut(s)	304, 420, 551, 985, 1010, 1312, 1325, 1685
Alw26I	GTCTC	5 cut(s)	70, 350, 690, 1463, 1641
AlwI	GGATC	7 cut(s)	28, 41, 173, 367, 820, 876, 1617
AlwNI	CAGNNNCTG	1 cut(s)	157
AoxI	GGCC	9 cut(s)	4, 72, 135, 220, 410, 502, 1184, 1215, 1269
ApeKI	GCWGC	5 cut(s)	157, 160, 232, 1370, 1373
ApoI	RAATTY	1 cut(s)	738
AspLEI	GCGC	4 cut(s)	51, 157, 208, 294
AspS9I	GGNCC	7 cut(s)	4, 58, 283, 503, 908, 1215, 1269
AsuHPI	GGTGA	2 cut(s)	106, 1411
AsuNHI	GCTAGC	1 cut(s)	1706
AvaII	GGWCC	3 cut(s)	58, 283, 908
BaeGI	GKGCMC	1 cut(s)	408
BalI	TGGCCA	1 cut(s)	1186
BamHI	GGATCC	1 cut(s)	33
BanI	GGYRCC	3 cut(s)	48, 403, 530
BarI	GAAGNNNNNNTAC	2 cut(s)	1126, 1158
BauI	CACGAG	2 cut(s)	885, 1715
BbsI	GAAGAC	1 cut(s)	103
BbvI	GCAGC	5 cut(s)	144, 147, 244, 1357, 1360
BccI	CCATC	8 cut(s)	245, 480, 494, 539, 590, 992, 1260, 1600
BceAI	ACGGC	1 cut(s)	245
BcgI	CGANNNNNNTGC	4 cut(s)	797, 831, 1070, 1104
BciT130I	CCWGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
BciVI	GTATCC	1 cut(s)	884
BcoDI	GTCTC	5 cut(s)	70, 350, 690, 1463, 1641
BfaI	CTAG	5 cut(s)	639, 728, 896, 1067, 1707
BfoI	RGCGCY	3 cut(s)	52, 158, 209
BfuAI	ACCTGC	1 cut(s)	24
BfuI	GTATCC	1 cut(s)	884
BglI	GCCNNNNNGGC	1 cut(s)	1192
BglII	AGATCT	1 cut(s)	949
BlpI	GCTNAGC	1 cut(s)	305
Bme1390I	CCNGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
Bme18I	GGWCC	3 cut(s)	58, 283, 908
BmgT120I	GGNCC	7 cut(s)	4, 58, 283, 503, 908, 1215, 1269
BmiI	GGNNCC	5 cut(s)	35, 50, 285, 405, 532
BmrFI	CCNGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
BmsI	GCATC	3 cut(s)	32, 1078, 1090
BmtI	GCTAGC	1 cut(s)	1710
BoxI	GACNNNNGTC	1 cut(s)	1455
BpiI	GAAGAC	1 cut(s)	103
BplI	GAGNNNNNCTC	2 cut(s)	1478, 1510
BpmI	CTGGAG	1 cut(s)	1050
Bpu1102I	GCTNAGC	1 cut(s)	305
BpuEI	CTTGAG	1 cut(s)	1246
Bsa29I	ATCGAT	1 cut(s)	1612
BsaHI	GRCGYC	2 cut(s)	49, 243
BsaI	GGTCTC	3 cut(s)	70, 350, 1463
BsaJI	CCNNGG	9 cut(s)	38, 120, 121, 132, 287, 407, 520, 955, 1453
BsaWI	WCCGGW	2 cut(s)	143, 400
BsaXI	ACNNNNNCTCC	2 cut(s)	1189, 1219
Bse118I	RCCGGY	1 cut(s)	1532
Bse1I	ACTGG	1 cut(s)	50
Bse3DI	GCAATG	3 cut(s)	337, 684, 808
BseBI	CCWGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
BseCI	ATCGAT	1 cut(s)	1612
BseDI	CCNNGG	9 cut(s)	38, 120, 121, 132, 287, 407, 520, 955, 1453
BseGI	GGATG	7 cut(s)	491, 495, 505, 582, 1176, 1555, 1790
BseMI	GCAATG	3 cut(s)	337, 684, 808
BseMII	CTCAG	1 cut(s)	319
BseNI	ACTGG	1 cut(s)	50
BseRI	GAGGAG	2 cut(s)	95, 368
BseSI	GKGCMC	1 cut(s)	408
BseXI	GCAGC	5 cut(s)	144, 147, 244, 1357, 1360
BsgI	GTGCAG	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	873
Bsh1285I	CGRYCG	2 cut(s)	148, 1453
BshFI	GGCC	9 cut(s)	6, 74, 137, 222, 412, 504, 1186, 1217, 1271
BshNI	GGYRCC	3 cut(s)	48, 403, 530
BshVI	ATCGAT	1 cut(s)	1612
BsiEI	CGRYCG	2 cut(s)	148, 1453
BsiSI	CCGG	4 cut(s)	144, 350, 401, 1533
BsmAI	GTCTC	5 cut(s)	70, 350, 690, 1463, 1641
BsmI	GAATGC	1 cut(s)	1354
BsnI	GGCC	9 cut(s)	6, 74, 137, 222, 412, 504, 1186, 1217, 1271
Bso31I	GGTCTC	3 cut(s)	70, 350, 1463
Bsp1286I	GDGCHC	1 cut(s)	408
Bsp1407I	TGTACA	1 cut(s)	916
Bsp143I	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
Bsp1720I	GCTNAGC	1 cut(s)	305
Bsp19I	CCATGG	1 cut(s)	132
BspANI	GGCC	9 cut(s)	6, 74, 137, 222, 412, 504, 1186, 1217, 1271
BspCNI	CTCAG	1 cut(s)	318
BspDI	ATCGAT	1 cut(s)	1612
BspFNI	CGCG	1 cut(s)	873
BspLI	GGNNCC	5 cut(s)	35, 50, 285, 405, 532
BspMI	ACCTGC	1 cut(s)	24
BspOI	GCTAGC	1 cut(s)	1710
BspPI	GGATC	7 cut(s)	28, 41, 173, 367, 820, 876, 1617
BspT107I	GGYRCC	3 cut(s)	48, 403, 530
BspTNI	GGTCTC	3 cut(s)	70, 350, 1463
BsrBI	CCGCTC	1 cut(s)	334
BsrDI	GCAATG	3 cut(s)	337, 684, 808
BsrFI	RCCGGY	1 cut(s)	1532
BsrGI	TGTACA	1 cut(s)	916
BsrI	ACTGG	1 cut(s)	50
BssAI	RCCGGY	1 cut(s)	1532
BssECI	CCNNGG	9 cut(s)	38, 120, 121, 132, 287, 407, 520, 955, 1453
BssMI	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
BssNI	GRCGYC	2 cut(s)	49, 243
BssSI	CACGAG	2 cut(s)	885, 1715
BssT1I	CCWWGG	2 cut(s)	132, 955
Bst2BI	CACGAG	2 cut(s)	885, 1715
Bst2UI	CCWGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
Bst4CI	ACNGT	4 cut(s)	197, 579, 921, 1636
Bst6I	CTCTTC	2 cut(s)	101, 1270
BstACI	GRCGYC	2 cut(s)	49, 243
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstAUI	TGTACA	1 cut(s)	916
BstDEI	CTNAG	1 cut(s)	305
BstDSI	CCRYGG	1 cut(s)	132
BstF5I	GGATG	7 cut(s)	491, 495, 505, 582, 1176, 1555, 1790
BstFNI	CGCG	1 cut(s)	873
BstH2I	RGCGCY	3 cut(s)	52, 158, 209
BstHHI	GCGC	4 cut(s)	51, 157, 208, 294
BstKTI	GATC	7 cut(s)	36, 181, 375, 828, 871, 952, 1612
BstMAI	GTCTC	5 cut(s)	70, 350, 690, 1463, 1641
BstMBI	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
BstMCI	CGRYCG	2 cut(s)	148, 1453
BstMWI	GCNNNNNNNGC	9 cut(s)	214, 223, 232, 251, 306, 845, 879, 1100, 1192
BstNI	CCWGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
BstNSI	RCATGY	2 cut(s)	274, 448
BstPAI	GACNNNNGTC	1 cut(s)	1455
BstSCI	CCNGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
BstSLI	GKGCMC	1 cut(s)	408
BstUI	CGCG	1 cut(s)	873
BstV1I	GCAGC	5 cut(s)	144, 147, 244, 1357, 1360
BstV2I	GAAGAC	1 cut(s)	103
BstX2I	RGATCY	2 cut(s)	33, 949
BstXI	CCANNNNNNTGG	1 cut(s)	1279
BstYI	RGATCY	2 cut(s)	33, 949
Bsu15I	ATCGAT	1 cut(s)	1612
BsuI	GTATCC	1 cut(s)	884
BsuRI	GGCC	9 cut(s)	6, 74, 137, 222, 412, 504, 1186, 1217, 1271
BsuTUI	ATCGAT	1 cut(s)	1612
BtgI	CCRYGG	1 cut(s)	132
BtsCI	GGATG	7 cut(s)	491, 495, 505, 582, 1176, 1555, 1790
BtsIMutI	CAGTG	3 cut(s)	598, 926, 1376
BveI	ACCTGC	1 cut(s)	24
CaiI	CAGNNNCTG	1 cut(s)	157
CfoI	GCGC	4 cut(s)	51, 157, 208, 294
Cfr10I	RCCGGY	1 cut(s)	1532
Cfr13I	GGNCC	7 cut(s)	4, 58, 283, 503, 908, 1215, 1269
ClaI	ATCGAT	1 cut(s)	1612
CseI	GACGC	2 cut(s)	251, 1610
CsiI	ACCWGGT	1 cut(s)	60
Csp6I	GTAC	7 cut(s)	391, 580, 841, 917, 1108, 1501, 1563
CviQI	GTAC	7 cut(s)	391, 580, 841, 917, 1108, 1501, 1563
DdeI	CTNAG	1 cut(s)	305
DinI	GGCGCC	1 cut(s)	50
DpnI	GATC	7 cut(s)	35, 180, 374, 827, 870, 951, 1611
DpnII	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
EaeI	YGGCCR	2 cut(s)	135, 1184
Eam1104I	CTCTTC	2 cut(s)	101, 1270
EarI	CTCTTC	2 cut(s)	101, 1270
EciI	GGCGGA	1 cut(s)	336
Eco130I	CCWWGG	2 cut(s)	132, 955
Eco31I	GGTCTC	3 cut(s)	70, 350, 1463
Eco32I	GATATC	1 cut(s)	1383
Eco47I	GGWCC	3 cut(s)	58, 283, 908
Eco57I	CTGAAG	5 cut(s)	1305, 1328, 1647, 1677, 1770
EcoO109I	RGGNCCY	1 cut(s)	283
EcoRI	GAATTC	1 cut(s)	738
EcoRII	CCWGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
EcoRV	GATATC	1 cut(s)	1383
EcoT14I	CCWWGG	2 cut(s)	132, 955
EcoT22I	ATGCAT	2 cut(s)	1105, 1130
EgeI	GGCGCC	1 cut(s)	50
EheI	GGCGCC	1 cut(s)	50
ErhI	CCWWGG	2 cut(s)	132, 955
FalI	AAGNNNNNCTT	2 cut(s)	1267, 1299
FauI	CCCGC	4 cut(s)	28, 259, 384, 513
FblI	GTMKAC	1 cut(s)	264
FokI	GGATG	7 cut(s)	498, 502, 512, 569, 1183, 1542, 1777
FspBI	CTAG	5 cut(s)	639, 728, 896, 1067, 1707
GlaI	GCGC	4 cut(s)	50, 156, 207, 293
GsuI	CTGGAG	1 cut(s)	1050
HaeII	RGCGCY	3 cut(s)	52, 158, 209
HaeIII	GGCC	9 cut(s)	6, 74, 137, 222, 412, 504, 1186, 1217, 1271
HapII	CCGG	4 cut(s)	144, 350, 401, 1533
HgaI	GACGC	2 cut(s)	251, 1610
HhaI	GCGC	4 cut(s)	51, 157, 208, 294
Hin1I	GRCGYC	2 cut(s)	49, 243
Hin6I	GCGC	4 cut(s)	49, 155, 206, 292
HinP1I	GCGC	4 cut(s)	49, 155, 206, 292
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HindIII	AAGCTT	2 cut(s)	418, 1310
HpaII	CCGG	4 cut(s)	144, 350, 401, 1533
HphI	GGTGA	2 cut(s)	106, 1411
Hpy166II	GTNNAC	2 cut(s)	265, 1701
Hpy188I	TCNGA	4 cut(s)	42, 183, 1087, 1387
Hpy188III	TCNNGA	7 cut(s)	617, 932, 1015, 1067, 1225, 1625, 1655
Hpy8I	GTNNAC	2 cut(s)	265, 1701
Hpy99I	CGWCG	4 cut(s)	245, 266, 389, 1266
HpyAV	CCTTC	5 cut(s)	85, 1425, 1437, 1622, 1794
HpyCH4III	ACNGT	4 cut(s)	197, 579, 921, 1636
HpyCH4IV	ACGT	3 cut(s)	1110, 1499, 1692
HpyCH4V	TGCA	8 cut(s)	464, 808, 965, 1103, 1128, 1211, 1352, 1376
HpyF10VI	GCNNNNNNNGC	9 cut(s)	214, 223, 232, 251, 306, 845, 879, 1100, 1192
HpyF3I	CTNAG	1 cut(s)	305
HpySE526I	ACGT	3 cut(s)	1110, 1499, 1692
Hsp92I	GRCGYC	2 cut(s)	49, 243
HspAI	GCGC	4 cut(s)	49, 155, 206, 292
KasI	GGCGCC	1 cut(s)	48
Kzo9I	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
LmnI	GCTCC	3 cut(s)	214, 548, 694
Lsp1109I	GCAGC	5 cut(s)	144, 147, 244, 1357, 1360
LweI	GCATC	3 cut(s)	32, 1078, 1090
MabI	ACCWGGT	1 cut(s)	60
MaeI	CTAG	5 cut(s)	639, 728, 896, 1067, 1707
MaeII	ACGT	3 cut(s)	1110, 1499, 1692
MaeIII	GTNAC	4 cut(s)	1076, 1331, 1528, 1580
MalI	GATC	7 cut(s)	35, 180, 374, 827, 870, 951, 1611
MbiI	CCGCTC	1 cut(s)	334
MboI	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
MboII	GAAGA	7 cut(s)	70, 88, 91, 103, 647, 1134, 1287
MflI	RGATCY	2 cut(s)	33, 949
MhlI	GDGCHC	1 cut(s)	408
MlsI	TGGCCA	1 cut(s)	1186
MluCI	AATT	5 cut(s)	459, 719, 738, 987, 1070
MluNI	TGGCCA	1 cut(s)	1186
Mly113I	GGCGCC	1 cut(s)	49
MlyI	GAGTC	4 cut(s)	122, 692, 1461, 1643
MmeI	TCCRAC	1 cut(s)	477
Mox20I	TGGCCA	1 cut(s)	1186
Mph1103I	ATGCAT	2 cut(s)	1105, 1130
MscI	TGGCCA	1 cut(s)	1186
MseI	TTAA	1 cut(s)	1118
MslI	CAYNNNNRTG	1 cut(s)	1343
Msp20I	TGGCCA	1 cut(s)	1186
MspA1I	CMGCKG	2 cut(s)	1010, 1325
MspI	CCGG	4 cut(s)	144, 350, 401, 1533
MspR9I	CCNGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
Mva1269I	GAATGC	1 cut(s)	1354
MvaI	CCWGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
MvnI	CGCG	1 cut(s)	873
MwoI	GCNNNNNNNGC	9 cut(s)	214, 223, 232, 251, 306, 845, 879, 1100, 1192
NarI	GGCGCC	1 cut(s)	49
NcoI	CCATGG	1 cut(s)	132
NdeII	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
NheI	GCTAGC	1 cut(s)	1706
NlaIV	GGNNCC	5 cut(s)	35, 50, 285, 405, 532
NmeAIII	GCCGAG	1 cut(s)	47
NmuCI	GTSAC	1 cut(s)	1076
NsiI	ATGCAT	2 cut(s)	1105, 1130
NspI	RCATGY	2 cut(s)	274, 448
PasI	CCCWGGG	1 cut(s)	121
PcsI	WCGNNNNNNNCGW	1 cut(s)	1618
PctI	GAATGC	1 cut(s)	1354
PfeI	GAWTC	9 cut(s)	91, 397, 715, 1034, 1082, 1174, 1541, 1614, 1730
PflFI	GACNNNGTC	1 cut(s)	62
PfoI	TCCNGGA	1 cut(s)	54
PleI	GAGTC	4 cut(s)	122, 692, 1461, 1643
PluTI	GGCGCC	1 cut(s)	52
PpsI	GAGTC	4 cut(s)	122, 692, 1461, 1643
PpuMI	RGGWCCY	1 cut(s)	283
PshAI	GACNNNNGTC	1 cut(s)	1455
Psp5II	RGGWCCY	1 cut(s)	283
Psp6I	CCWGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
PspGI	CCWGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
PspN4I	GGNNCC	5 cut(s)	35, 50, 285, 405, 532
PspPI	GGNCC	7 cut(s)	4, 58, 283, 503, 908, 1215, 1269
PspPPI	RGGWCCY	1 cut(s)	283
PstNI	CAGNNNCTG	1 cut(s)	157
PsuI	RGATCY	2 cut(s)	33, 949
PsyI	GACNNNGTC	1 cut(s)	62
PvuII	CAGCTG	2 cut(s)	1010, 1325
RsaI	GTAC	7 cut(s)	392, 581, 842, 918, 1109, 1502, 1564
RsaNI	GTAC	7 cut(s)	391, 580, 841, 917, 1108, 1501, 1563
RseI	CAYNNNNRTG	1 cut(s)	1343
SalI	GTCGAC	1 cut(s)	263
SaqAI	TTAA	1 cut(s)	1118
Sau3AI	GATC	7 cut(s)	33, 178, 372, 825, 868, 949, 1609
Sau96I	GGNCC	7 cut(s)	4, 58, 283, 503, 908, 1215, 1269
SchI	GAGTC	4 cut(s)	122, 692, 1461, 1643
ScrFI	CCNGG	7 cut(s)	56, 62, 122, 152, 289, 409, 522
SduI	GDGCHC	1 cut(s)	408
SexAI	ACCWGGT	1 cut(s)	60
SfaNI	GCATC	3 cut(s)	32, 1078, 1090
SfoI	GGCGCC	1 cut(s)	50
SinI	GGWCC	3 cut(s)	58, 283, 908
SmiMI	CAYNNNNRTG	1 cut(s)	1343
SmlI	CTYRAG	1 cut(s)	1225
SmoI	CTYRAG	1 cut(s)	1225
Sse9I	AATT	5 cut(s)	459, 719, 738, 987, 1070
SspDI	GGCGCC	1 cut(s)	48
SspMI	CTAG	5 cut(s)	639, 728, 896, 1067, 1707
StyD4I	CCNGG	7 cut(s)	54, 60, 120, 150, 287, 407, 520
StyI	CCWWGG	2 cut(s)	132, 955
TaaI	ACNGT	4 cut(s)	197, 579, 921, 1636
TaiI	ACGT	3 cut(s)	1113, 1502, 1695
TaqI	TCGA	7 cut(s)	26, 240, 264, 564, 861, 1261, 1612
TaqII	GACCGA	1 cut(s)	1467
TasI	AATT	5 cut(s)	459, 719, 738, 987, 1070
TatI	WGTACW	3 cut(s)	579, 916, 1562
TauI	GCSGC	5 cut(s)	74, 140, 337, 531, 1094
TfiI	GAWTC	9 cut(s)	91, 397, 715, 1034, 1082, 1174, 1541, 1614, 1730
Tru1I	TTAA	1 cut(s)	1118
Tru9I	TTAA	1 cut(s)	1118
TscAI	CASTG	3 cut(s)	598, 926, 1383
TseFI	GTSAC	1 cut(s)	1076
TseI	GCWGC	5 cut(s)	157, 160, 232, 1370, 1373
Tsp45I	GTSAC	1 cut(s)	1076
TspDTI	ATGAA	8 cut(s)	332, 502, 1026, 1071, 1361, 1418, 1510, 1514
TspRI	CASTG	3 cut(s)	598, 926, 1383
Tth111I	GACNNNGTC	1 cut(s)	62
VpaK11BI	GGWCC	3 cut(s)	58, 283, 908
XapI	RAATTY	1 cut(s)	738
XbaI	TCTAGA	1 cut(s)	1066
XceI	RCATGY	2 cut(s)	274, 448
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1058
XmiI	GTMKAC	1 cut(s)	264
XspI	CTAG	5 cut(s)	639, 728, 896, 1067, 1707
Zsp2I	ATGCAT	2 cut(s)	1105, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.