Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005601

Physical Location & Seq

Genomic Coordinates Forward (+)

38832626 .. 38837554

Gene Structure 4929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0275900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGAAATCCATGAAGGAGGTGTAATTCGCAATTGTGTGATCAAGCTGAGGGAGGATTGTAAAAAGAGAAGAGACAAGGTCTATGTTGGCTGTGGTGCTGGTTTTGGAGGTGACAGGCCTTTGGCAGCTCTTAAGTTGCTGCAGAGAGTCAAAGAGCTCAACTATATCGTGCTTGAATGCCTCGCAGAGCGCACCCTTGCTGAACGGTATCAAGTTATGGTTTCGGGTGGTGATGGTTATGATTCAAGGATTTCTGACTGGATGCGATTGCTCCTTCCTTTGGCTGTTGAGAGAGGAACTTGCATAATCACCAACATGGGTGCAATGGATCCACCGGGGGCACAGGAAAAGGTTATAGAAATAGCCAGCAGCTTGGGGCTTAGTGTTTCTGTTGCTGTGGCTCATGAGATTTCTCTCACAAATATAGGTTCAGCCTCTCATGAGAAGTCATTTTTGATGGAAGGTGGTATTAGCACCTATCTGGGAGTGGCTCCGATTGTTGAATGTTTGGAAAAGTATCAGCCAAATGTAATTATAACTTCACGGGTTGCAGATGCTGCCTTATTTTTAGCACCAATGATTTATGAACTTGGTTGGAACTGGGACAACTTGGAGCAGCTAGCACAGGGGTCTCTGGCAGGCCATCTTCTAGAGTGTGGTTGTCAACTCACGGGGGGATACTTCATGCACCCAGGGGACAAGTCTCGAGACATGTCTTCCTCTCAGCTCCTAGACTTGTCACTTCCTTATGCTGAAATTAGCTCTGATGGAAAAGTATGTGTAGCGAAGGCAGAGGGTAGTGGTGGGGTTTTGAACTTCAGTACATGTGCTCAACAACTTCTTTATGAGATCGGGAATCCGGGTGCTTATGTAACTCCTGATGTGATAATTGATATCCGGGATGTTTCATTCTACCCATTATCAAGTTGTAAGGTCCTCTGTACTGGAGCAAAACCATCTGCAGTATCAGTTCCTGATAAACTCCTGCGGTTGGTTCCAAAGGACTATGGTTGGAAAGGATGGGGTGAAATATCTTATGGAGGATTTGAATGTGTTAAACGTGCCAAGATTGCTGAATTTCTGGTGAGATCATGGATGGAAGAAGTAATTCCTGATGTTAGCAGCCATGTGGTTTCTTACATAGTTGGGCTTGATAGCCTGAAGGCAACTGGTCTTGGTGACAGTGCTTCATGTCAGATGGTTAGCGATATTAGGTTACGCATGGATGGGTTATTCAAGCTAAAGGAGCATGCAGTCCAATTTATTACAGATTTTACTGCTTTATATACAAATGGACCAGCTGGTGGTGGTGGTATCAGCACTGGACACAAGAAAGAGATCATCCTTGAAAAATATTTGGTCAAGCGTGAACACGTATTCTGGCAGACTGCAGTAAAACACACCAGAGTGATGAAATCAAATAAAACAGGAATTAAATTTCAAGATGGGACAAATATTAGTCTTCCTTATGTGTCTGCATTGCCGATTTCAGAAGCAAGTGAAGTCGATTCTTCTATTGGTGTTCCATTTTCTGGCAGAATCTCTCCTGCTCCATCTGGCCAGAAAATTCCACTCTATGATGTAGCACATAGCCGAGCTGGAGACAAAGGAAATGACTTGAATTTTTCTATCATCCCACATTTTCCTCCAGATGTAGAGAGGTTGAAGAGGATCATAACACCGCAGTGGGTAAAGAAAGTAGTGTCAACTCTTTTAAATTCCTCTTCTTTTCCAGATACGGATGCCATCAATGAAAGAGACAAATGGGTCGACGAAAATGTAAAGGTGGAAATTTATGAAGTGAAGGGAATCCGATCTTTGAATGTAGTGGTTAGGGACATTCTTGATGGTGGTGTAAACTGCTCTAGAAGAATTGACCGGCATGGAAAGACCATCTCCGATCTCATACTGTGTCAGCAAGTTGTATTGCCTCCATGGTTGGGTCGTTCAAGAACTCTTATTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

655

Amino Acids

71.66

Weight (kDa)

6.52

Isoelectric Point (pI)

36.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AtuA	PF07287	27 - 460	3.5e-98	Acyclic terpene utilisation family protein AtuA
AtuA_ferredoxin	PF23544	523 - 641	5.2e-46	AtuA ferredoxin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64584
fragaria_vesca	FvH4_7g16950
malus_domestica	MD01G1084100.v1.1 MD01G1224000.v1.1 MD07G1294800.v1.1
prunus_persica	Prupe.2G191800_v2.0.a1 Prupe.2G191800_v2.0.a1 Prupe.2G314400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360201 RchiOBHm_Chr1g0381731
rosa_laevigata	RLG00000026212
rosa_multiflora	Rmu_co8030964.1_g000001 Rmu_sc0004579.1_g000007 Rmu_ssc0000316.1_g000004
rosa_roxburghii	Rroxscaffold_4G00278490
rosa_rugosa	Rorug01G0275900 Rorug01G0430500 Rorug07G0079800
rosa_samantha	Rh1AG289600 Rh1BG255200 Rh1BG411200 Rh1DG284700 Rh1DG443000 Rh5AG144000 Rh5BG201700 Rh5DG143000
rosa_wichuraiana	Rw1G039610 Rw5G018420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	536
AasI	GACNNNNNNGTC	1 cut(s)	1766
AccB7I	CCANNNNNTGG	2 cut(s)	1304, 1532
AccI	GTMKAC	1 cut(s)	1770
AciI	CCGC	2 cut(s)	988, 1682
AclWI	GGATC	3 cut(s)	323, 336, 1679
AcoI	YGGCCR	1 cut(s)	1558
AcsI	RAATTY	6 cut(s)	1076, 1436, 1566, 1621, 1717, 1791
AcuI	CTGAAG	2 cut(s)	802, 1181
AfaI	GTAC	2 cut(s)	823, 943
AfiI	CCNNNNNNNGG	5 cut(s)	280, 991, 1304, 1532, 1940
AflII	CTTAAG	1 cut(s)	131
AflIII	ACRYGT	3 cut(s)	711, 824, 1372
AjnI	CCWGG	1 cut(s)	691
AleI	CACNNNNGTG	2 cut(s)	1406, 1684
Alw21I	GWGCWC	2 cut(s)	159, 832
Alw26I	GTCTC	6 cut(s)	66, 636, 702, 708, 1596, 1752
AlwI	GGATC	3 cut(s)	323, 336, 1679
AlwNI	CAGNNNCTG	2 cut(s)	557, 974
Ama87I	CYCGRG	1 cut(s)	705
AoxI	GGCC	3 cut(s)	116, 640, 1558
ApeKI	GCWGC	6 cut(s)	125, 139, 369, 557, 616, 1122
ApoI	RAATTY	6 cut(s)	1076, 1436, 1566, 1621, 1717, 1791
Asp700I	GAANNNNTTC	1 cut(s)	1107
AspLEI	GCGC	1 cut(s)	192
AspS9I	GGNCC	2 cut(s)	934, 1295
AsuC2I	CCSGG	3 cut(s)	336, 861, 899
AsuHPI	GGTGA	6 cut(s)	122, 242, 301, 1037, 1096, 1190
AsuNHI	GCTAGC	1 cut(s)	619
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	2 cut(s)	934, 1295
BaeGI	GKGCMC	1 cut(s)	343
BalI	TGGCCA	1 cut(s)	1560
BamHI	GGATCC	1 cut(s)	328
BanII	GRGCYC	1 cut(s)	159
BbsI	GAAGAC	2 cut(s)	708, 1454
Bbv12I	GWGCWC	2 cut(s)	159, 832
BbvCI	CCTCAGC	1 cut(s)	47
BbvI	GCAGC	6 cut(s)	126, 137, 381, 544, 628, 1134
BciT130I	CCWGG	1 cut(s)	693
BciVI	GTATCC	1 cut(s)	671
BclI	TGATCA	1 cut(s)	39
BcnI	CCSGG	3 cut(s)	336, 861, 899
BcoDI	GTCTC	6 cut(s)	66, 636, 702, 708, 1596, 1752
BfaI	CTAG	4 cut(s)	620, 650, 731, 1866
BfmI	CTRYAG	3 cut(s)	140, 960, 1389
BfrI	CTTAAG	1 cut(s)	131
BfuI	GTATCC	1 cut(s)	671
BisI	GCNGC	6 cut(s)	126, 140, 370, 558, 617, 1123
BlsI	GCNGC	6 cut(s)	127, 141, 371, 559, 618, 1124
Bme1390I	CCNGG	4 cut(s)	336, 693, 861, 899
Bme18I	GGWCC	2 cut(s)	934, 1295
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	2 cut(s)	934, 1295
BmiI	GGNNCC	3 cut(s)	330, 492, 996
BmrFI	CCNGG	4 cut(s)	336, 693, 861, 899
BmrI	ACTGGG	1 cut(s)	610
BmsI	GCATC	3 cut(s)	252, 544, 1732
BmtI	GCTAGC	1 cut(s)	623
BmuI	ACTGGG	1 cut(s)	610
BpiI	GAAGAC	2 cut(s)	708, 1454
BpmI	CTGGAG	3 cut(s)	966, 1620, 1632
Bpu10I	CCTNAGC	1 cut(s)	47
BpuMI	CCSGG	3 cut(s)	336, 861, 899
BsaAI	YACGTR	1 cut(s)	1375
BsaI	GGTCTC	1 cut(s)	636
BsaJI	CCNNGG	4 cut(s)	335, 691, 692, 1934
Bsc4I	CCNNNNNNNGG	5 cut(s)	280, 991, 1304, 1532, 1940
Bse118I	RCCGGY	1 cut(s)	1878
Bse1I	ACTGG	5 cut(s)	263, 605, 949, 1174, 1327
Bse3DI	GCAATG	2 cut(s)	330, 1478
BseBI	CCWGG	1 cut(s)	693
BseDI	CCNNGG	4 cut(s)	335, 691, 692, 1934
BseGI	GGATG	8 cut(s)	267, 907, 1025, 1101, 1231, 1341, 1632, 1747
BseLI	CCNNNNNNNGG	5 cut(s)	280, 991, 1304, 1532, 1940
BseMI	GCAATG	2 cut(s)	330, 1478
BseMII	CTCAG	2 cut(s)	38, 737
BseNI	ACTGG	5 cut(s)	263, 605, 949, 1174, 1327
BseSI	GKGCMC	1 cut(s)	343
BseXI	GCAGC	6 cut(s)	126, 137, 381, 544, 628, 1134
BshFI	GGCC	3 cut(s)	118, 642, 1560
BsiHKAI	GWGCWC	2 cut(s)	159, 832
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	4 cut(s)	335, 860, 898, 1879
BslFI	GGGAC	4 cut(s)	617, 710, 1462, 1850
BslI	CCNNNNNNNGG	5 cut(s)	280, 991, 1304, 1532, 1940
BsmAI	GTCTC	6 cut(s)	66, 636, 702, 708, 1596, 1752
BsmFI	GGGAC	4 cut(s)	617, 710, 1462, 1850
BsmI	GAATGC	1 cut(s)	182
BsnI	GGCC	3 cut(s)	118, 642, 1560
Bso31I	GGTCTC	1 cut(s)	636
BsoBI	CYCGRG	1 cut(s)	705
Bsp1286I	GDGCHC	3 cut(s)	159, 343, 832
Bsp143I	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
Bsp19I	CCATGG	1 cut(s)	1934
BspACI	CCGC	2 cut(s)	988, 1682
BspANI	GGCC	3 cut(s)	118, 642, 1560
BspCNI	CTCAG	2 cut(s)	39, 736
BspHI	TCATGA	2 cut(s)	403, 439
BspLI	GGNNCC	3 cut(s)	330, 492, 996
BspMAI	CTGCAG	3 cut(s)	144, 964, 1393
BspOI	GCTAGC	1 cut(s)	623
BspPI	GGATC	3 cut(s)	323, 336, 1679
BspTI	CTTAAG	1 cut(s)	131
BspTNI	GGTCTC	1 cut(s)	636
BsrDI	GCAATG	2 cut(s)	330, 1478
BsrFI	RCCGGY	1 cut(s)	1878
BsrI	ACTGG	5 cut(s)	263, 605, 949, 1174, 1327
BssAI	RCCGGY	1 cut(s)	1878
BssECI	CCNNGG	4 cut(s)	335, 691, 692, 1934
BssMI	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
BssT1I	CCWWGG	1 cut(s)	1934
Bst2UI	CCWGG	1 cut(s)	693
Bst4CI	ACNGT	3 cut(s)	207, 1184, 1911
Bst6I	CTCTTC	3 cut(s)	64, 1661, 1729
BstAFI	CTTAAG	1 cut(s)	131
BstAPI	GCANNNNNTGC	1 cut(s)	557
BstBAI	YACGTR	1 cut(s)	1375
BstC8I	GCNNGC	4 cut(s)	367, 621, 640, 1251
BstDEI	CTNAG	3 cut(s)	47, 380, 723
BstDSI	CCRYGG	1 cut(s)	1934
BstF5I	GGATG	8 cut(s)	267, 907, 1025, 1101, 1231, 1341, 1632, 1747
BstHHI	GCGC	1 cut(s)	192
BstKTI	GATC	8 cut(s)	42, 331, 852, 1091, 1341, 1674, 1817, 1903
BstMAI	GTCTC	6 cut(s)	66, 636, 702, 708, 1596, 1752
BstMBI	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
BstMWI	GCNNNNNNNGC	3 cut(s)	557, 1070, 1246
BstNI	CCWGG	1 cut(s)	693
BstNSI	RCATGY	3 cut(s)	715, 828, 1253
BstSCI	CCNGG	4 cut(s)	334, 691, 859, 897
BstSFI	CTRYAG	3 cut(s)	140, 960, 1389
BstSLI	GKGCMC	1 cut(s)	343
BstV1I	GCAGC	6 cut(s)	126, 137, 381, 544, 628, 1134
BstV2I	GAAGAC	2 cut(s)	708, 1454
BstX2I	RGATCY	1 cut(s)	328
BstXI	CCANNNNNNTGG	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	328
BsuI	GTATCC	1 cut(s)	671
BsuRI	GGCC	3 cut(s)	118, 642, 1560
BtgI	CCRYGG	1 cut(s)	1934
BtsCI	GGATG	8 cut(s)	267, 907, 1025, 1101, 1231, 1341, 1632, 1747
BtsI	GCAGTG	1 cut(s)	1691
BtsIMutI	CAGTG	3 cut(s)	1189, 1320, 1691
Cac8I	GCNNGC	4 cut(s)	367, 621, 640, 1251
CaiI	CAGNNNCTG	2 cut(s)	557, 974
CciI	TCATGA	2 cut(s)	403, 439
CfoI	GCGC	1 cut(s)	192
Cfr10I	RCCGGY	1 cut(s)	1878
Cfr13I	GGNCC	2 cut(s)	934, 1295
Csp6I	GTAC	2 cut(s)	822, 942
CviQI	GTAC	2 cut(s)	822, 942
DdeI	CTNAG	3 cut(s)	47, 380, 723
DpnI	GATC	8 cut(s)	41, 330, 851, 1090, 1340, 1673, 1816, 1902
DpnII	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
DraI	TTTAAA	1 cut(s)	1716
DrdI	GACNNNNNNGTC	1 cut(s)	1766
DseDI	GACNNNNNNGTC	1 cut(s)	1766
EaeI	YGGCCR	1 cut(s)	1558
Eam1104I	CTCTTC	3 cut(s)	64, 1661, 1729
EarI	CTCTTC	3 cut(s)	64, 1661, 1729
Ecl136II	GAGCTC	1 cut(s)	157
Eco130I	CCWWGG	1 cut(s)	1934
Eco147I	AGGCCT	1 cut(s)	118
Eco24I	GRGCYC	1 cut(s)	159
Eco31I	GGTCTC	1 cut(s)	636
Eco32I	GATATC	1 cut(s)	895
Eco47I	GGWCC	2 cut(s)	934, 1295
Eco53kI	GAGCTC	1 cut(s)	157
Eco57I	CTGAAG	2 cut(s)	802, 1181
Eco88I	CYCGRG	1 cut(s)	705
EcoICRI	GAGCTC	1 cut(s)	157
EcoO109I	RGGNCCY	1 cut(s)	934
EcoRII	CCWGG	1 cut(s)	691
EcoRV	GATATC	1 cut(s)	895
EcoT14I	CCWWGG	1 cut(s)	1934
EcoT38I	GRGCYC	1 cut(s)	159
ErhI	CCWWGG	1 cut(s)	1934
FaqI	GGGAC	4 cut(s)	617, 710, 1462, 1850
FbaI	TGATCA	1 cut(s)	39
FblI	GTMKAC	1 cut(s)	1770
Fnu4HI	GCNGC	6 cut(s)	126, 140, 370, 558, 617, 1123
FokI	GGATG	8 cut(s)	274, 914, 1032, 1108, 1238, 1328, 1619, 1754
FriOI	GRGCYC	1 cut(s)	159
Fsp4HI	GCNGC	6 cut(s)	126, 140, 370, 558, 617, 1123
FspBI	CTAG	4 cut(s)	620, 650, 731, 1866
GlaI	GCGC	1 cut(s)	191
GluI	GCNGC	6 cut(s)	126, 140, 370, 558, 617, 1123
GsuI	CTGGAG	3 cut(s)	966, 1620, 1632
HaeIII	GGCC	3 cut(s)	118, 642, 1560
HapII	CCGG	4 cut(s)	335, 860, 898, 1879
HhaI	GCGC	1 cut(s)	192
Hin6I	GCGC	1 cut(s)	190
HinP1I	GCGC	1 cut(s)	190
HincII	GTYRAC	3 cut(s)	665, 1707, 1771
HindII	GTYRAC	3 cut(s)	665, 1707, 1771
HinfI	GANTC	6 cut(s)	147, 242, 856, 1508, 1539, 1809
HpaII	CCGG	4 cut(s)	335, 860, 898, 1879
HphI	GGTGA	6 cut(s)	122, 242, 301, 1037, 1096, 1190
Hpy166II	GTNNAC	5 cut(s)	665, 1370, 1707, 1771, 1858
Hpy188I	TCNGA	7 cut(s)	256, 495, 766, 1197, 1492, 1814, 1900
Hpy8I	GTNNAC	5 cut(s)	665, 1370, 1707, 1771, 1858
Hpy99I	CGWCG	1 cut(s)	1775
HpyAV	CCTTC	6 cut(s)	8, 284, 455, 781, 1156, 1798
HpyCH4III	ACNGT	3 cut(s)	207, 1184, 1911
HpyCH4IV	ACGT	2 cut(s)	1060, 1374
HpyCH4V	TGCA	9 cut(s)	142, 303, 323, 551, 688, 962, 1253, 1391, 1478
HpyF10VI	GCNNNNNNNGC	3 cut(s)	557, 1070, 1246
HpyF3I	CTNAG	3 cut(s)	47, 380, 723
HpySE526I	ACGT	2 cut(s)	1060, 1374
HspAI	GCGC	1 cut(s)	190
Ksp22I	TGATCA	1 cut(s)	39
Kzo9I	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
LmnI	GCTCC	7 cut(s)	276, 496, 613, 732, 947, 1246, 1555
Lsp1109I	GCAGC	6 cut(s)	126, 137, 381, 544, 628, 1134
LweI	GCATC	3 cut(s)	252, 544, 1732
MaeI	CTAG	4 cut(s)	620, 650, 731, 1866
MaeII	ACGT	2 cut(s)	1060, 1374
MaeIII	GTNAC	5 cut(s)	110, 738, 871, 1178, 1215
MalI	GATC	8 cut(s)	41, 330, 851, 1090, 1340, 1673, 1816, 1902
MboI	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
MboII	GAAGA	9 cut(s)	81, 638, 708, 1112, 1454, 1503, 1678, 1716, 1881
MfeI	CAATTG	1 cut(s)	31
MflI	RGATCY	1 cut(s)	328
MhlI	GDGCHC	3 cut(s)	159, 343, 832
MlsI	TGGCCA	1 cut(s)	1560
MluNI	TGGCCA	1 cut(s)	1560
MlyI	GAGTC	1 cut(s)	156
MmeI	TCCRAC	2 cut(s)	575, 992
Mox20I	TGGCCA	1 cut(s)	1560
MroXI	GAANNNNTTC	1 cut(s)	1107
MscI	TGGCCA	1 cut(s)	1560
MseI	TTAA	4 cut(s)	132, 1056, 1434, 1715
MslI	CAYNNNNRTG	3 cut(s)	314, 1406, 1684
Msp20I	TGGCCA	1 cut(s)	1560
MspA1I	CMGCKG	1 cut(s)	1301
MspCI	CTTAAG	1 cut(s)	131
MspI	CCGG	4 cut(s)	335, 860, 898, 1879
MspR9I	CCNGG	4 cut(s)	336, 693, 861, 899
MunI	CAATTG	1 cut(s)	31
Mva1269I	GAATGC	1 cut(s)	182
MvaI	CCWGG	1 cut(s)	693
MwoI	GCNNNNNNNGC	3 cut(s)	557, 1070, 1246
NciI	CCSGG	3 cut(s)	336, 861, 899
NcoI	CCATGG	1 cut(s)	1934
NdeII	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
NheI	GCTAGC	1 cut(s)	619
NlaIV	GGNNCC	3 cut(s)	330, 492, 996
NmeAIII	GCCGAG	1 cut(s)	1619
NmuCI	GTSAC	3 cut(s)	110, 738, 1178
NspI	RCATGY	3 cut(s)	715, 828, 1253
OliI	CACNNNNGTG	2 cut(s)	1406, 1684
PaeI	GCATGC	1 cut(s)	1253
PaeR7I	CTCGAG	1 cut(s)	705
PagI	TCATGA	2 cut(s)	403, 439
PasI	CCCWGGG	1 cut(s)	692
PceI	AGGCCT	1 cut(s)	118
PciI	ACATGT	2 cut(s)	711, 824
PctI	GAATGC	1 cut(s)	182
PdmI	GAANNNNTTC	1 cut(s)	1107
PfeI	GAWTC	5 cut(s)	242, 856, 1508, 1539, 1809
PflFI	GACNNNGTC	1 cut(s)	77
PflMI	CCANNNNNTGG	2 cut(s)	1304, 1532
PfoI	TCCNGGA	1 cut(s)	897
PkrI	GCNGC	6 cut(s)	127, 141, 371, 559, 618, 1124
PleI	GAGTC	1 cut(s)	155
PpsI	GAGTC	1 cut(s)	155
Ppu21I	YACGTR	1 cut(s)	1375
PpuMI	RGGWCCY	1 cut(s)	934
PscI	ACATGT	2 cut(s)	711, 824
PsiI	TTATAA	1 cut(s)	536
Psp124BI	GAGCTC	1 cut(s)	159
Psp5II	RGGWCCY	1 cut(s)	934
Psp6I	CCWGG	1 cut(s)	691
PspGI	CCWGG	1 cut(s)	691
PspN4I	GGNNCC	3 cut(s)	330, 492, 996
PspPI	GGNCC	2 cut(s)	934, 1295
PspPPI	RGGWCCY	1 cut(s)	934
PstI	CTGCAG	3 cut(s)	144, 964, 1393
PstNI	CAGNNNCTG	2 cut(s)	557, 974
PsuI	RGATCY	1 cut(s)	328
PsyI	GACNNNGTC	1 cut(s)	77
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	2 cut(s)	823, 943
RsaNI	GTAC	2 cut(s)	822, 942
RseI	CAYNNNNRTG	3 cut(s)	314, 1406, 1684
SacI	GAGCTC	1 cut(s)	159
SalI	GTCGAC	1 cut(s)	1769
SaqAI	TTAA	4 cut(s)	132, 1056, 1434, 1715
SatI	GCNGC	6 cut(s)	126, 140, 370, 558, 617, 1123
Sau3AI	GATC	8 cut(s)	39, 328, 849, 1088, 1338, 1671, 1814, 1900
Sau96I	GGNCC	2 cut(s)	934, 1295
SchI	GAGTC	1 cut(s)	156
ScrFI	CCNGG	4 cut(s)	336, 693, 861, 899
SduI	GDGCHC	3 cut(s)	159, 343, 832
SfaNI	GCATC	3 cut(s)	252, 544, 1732
SfcI	CTRYAG	3 cut(s)	140, 960, 1389
Sfr274I	CTCGAG	1 cut(s)	705
SinI	GGWCC	2 cut(s)	934, 1295
SlaI	CTCGAG	1 cut(s)	705
SmiMI	CAYNNNNRTG	3 cut(s)	314, 1406, 1684
SmlI	CTYRAG	2 cut(s)	131, 705
SmoI	CTYRAG	2 cut(s)	131, 705
SphI	GCATGC	1 cut(s)	1253
SseBI	AGGCCT	1 cut(s)	118
SsiI	CCGC	2 cut(s)	988, 1682
SspI	AATATT	2 cut(s)	1355, 1456
SspMI	CTAG	4 cut(s)	620, 650, 731, 1866
SstI	GAGCTC	1 cut(s)	159
StuI	AGGCCT	1 cut(s)	118
StyD4I	CCNGG	4 cut(s)	334, 691, 859, 897
StyI	CCWWGG	1 cut(s)	1934
TaaI	ACNGT	3 cut(s)	207, 1184, 1911
TaiI	ACGT	2 cut(s)	1063, 1377
TaqI	TCGA	3 cut(s)	706, 1506, 1770
TatI	WGTACW	2 cut(s)	821, 941
TfiI	GAWTC	5 cut(s)	242, 856, 1508, 1539, 1809
Tru1I	TTAA	4 cut(s)	132, 1056, 1434, 1715
Tru9I	TTAA	4 cut(s)	132, 1056, 1434, 1715
TscAI	CASTG	3 cut(s)	1189, 1327, 1691
TseFI	GTSAC	3 cut(s)	110, 738, 1178
TseI	GCWGC	6 cut(s)	125, 139, 369, 557, 616, 1122
Tsp45I	GTSAC	3 cut(s)	110, 738, 1178
TspDTI	ATGAA	8 cut(s)	27, 600, 673, 897, 1179, 1427, 1767, 1812
TspGWI	ACGGA	1 cut(s)	1754
TspRI	CASTG	3 cut(s)	1189, 1327, 1691
Tth111I	GACNNNGTC	1 cut(s)	77
Van91I	CCANNNNNTGG	2 cut(s)	1304, 1532
Vha464I	CTTAAG	1 cut(s)	131
VpaK11BI	GGWCC	2 cut(s)	934, 1295
XapI	RAATTY	6 cut(s)	1076, 1436, 1566, 1621, 1717, 1791
XbaI	TCTAGA	2 cut(s)	649, 1865
XceI	RCATGY	3 cut(s)	715, 828, 1253
XhoI	CTCGAG	1 cut(s)	705
XmiI	GTMKAC	1 cut(s)	1770
XmnI	GAANNNNTTC	1 cut(s)	1107
XspI	CTAG	4 cut(s)	620, 650, 731, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.