No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64584 |
| fragaria_vesca | FvH4_7g16950 |
| malus_domestica | MD01G1084100.v1.1 MD01G1224000.v1.1 MD07G1294800.v1.1 |
| prunus_persica | Prupe.2G191800_v2.0.a1 Prupe.2G191800_v2.0.a1 Prupe.2G314400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0360201 RchiOBHm_Chr1g0381731 |
| rosa_laevigata | RLG00000026212 |
| rosa_multiflora | Rmu_co8030964.1_g000001 Rmu_sc0004579.1_g000007 Rmu_ssc0000316.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00278490 |
| rosa_rugosa | Rorug01G0275900 Rorug01G0430500 Rorug07G0079800 |
| rosa_samantha | Rh1AG289600 Rh1BG255200 Rh1BG411200 Rh1DG284700 Rh1DG443000 Rh5AG144000 Rh5BG201700 Rh5DG143000 |
| rosa_wichuraiana | Rw1G039610 Rw5G018420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1145 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 778 |
| AccII | CGCG | 2 cut(s) | 298, 1287 |
| AciI | CCGC | 5 cut(s) | 131, 201, 863, 1143, 1149 |
| AclI | AACGTT | 1 cut(s) | 1134 |
| AclWI | GGATC | 2 cut(s) | 360, 1231 |
| AcoI | YGGCCR | 2 cut(s) | 357, 938 |
| AcsI | RAATTY | 2 cut(s) | 467, 637 |
| AcuI | CTGAAG | 2 cut(s) | 389, 540 |
| AcyI | GRCGYC | 1 cut(s) | 1164 |
| AdeI | CACNNNGTG | 1 cut(s) | 778 |
| AfaI | GTAC | 2 cut(s) | 704, 977 |
| AfeI | AGCGCT | 1 cut(s) | 625 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 778, 1030 |
| AflIII | ACRYGT | 1 cut(s) | 931 |
| AgsI | TTSAA | 6 cut(s) | 146, 621, 734, 749, 1085, 1247 |
| AjiI | CACGTC | 1 cut(s) | 932 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 590, 622 |
| AluBI | AGCT | 7 cut(s) | 69, 252, 262, 268, 518, 1254, 1357 |
| AluI | AGCT | 7 cut(s) | 69, 252, 262, 268, 518, 1254, 1357 |
| Alw21I | GWGCWC | 2 cut(s) | 984, 1285 |
| Alw26I | GTCTC | 5 cut(s) | 325, 593, 922, 1179, 1327 |
| AlwI | GGATC | 2 cut(s) | 360, 1231 |
| Ama87I | CYCGRG | 2 cut(s) | 269, 442 |
| Aor51HI | AGCGCT | 1 cut(s) | 625 |
| AoxI | GGCC | 5 cut(s) | 186, 357, 421, 804, 938 |
| ApeKI | GCWGC | 4 cut(s) | 626, 795, 1112, 1251 |
| ApoI | RAATTY | 2 cut(s) | 467, 637 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 125, 157 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 402, 1343 |
| AspLEI | GCGC | 2 cut(s) | 300, 626 |
| AspS9I | GGNCC | 4 cut(s) | 133, 483, 524, 805 |
| AsuHPI | GGTGA | 3 cut(s) | 425, 955, 1306 |
| AvaI | CYCGRG | 2 cut(s) | 269, 442 |
| AvaII | GGWCC | 3 cut(s) | 133, 483, 524 |
| BaeGI | GKGCMC | 1 cut(s) | 892 |
| BanI | GGYRCC | 1 cut(s) | 1145 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 149, 181 |
| BauI | CACGAG | 2 cut(s) | 543, 1278 |
| BbsI | GAAGAC | 1 cut(s) | 70 |
| Bbv12I | GWGCWC | 2 cut(s) | 984, 1285 |
| BbvI | GCAGC | 4 cut(s) | 613, 782, 1124, 1263 |
| BccI | CCATC | 4 cut(s) | 398, 845, 910, 1153 |
| BceAI | ACGGC | 2 cut(s) | 344, 803 |
| BcoDI | GTCTC | 5 cut(s) | 325, 593, 922, 1179, 1327 |
| BfaI | CTAG | 3 cut(s) | 1056, 1350, 1358 |
| BfmI | CTRYAG | 1 cut(s) | 263 |
| BfoI | RGCGCY | 1 cut(s) | 627 |
| BglII | AGATCT | 2 cut(s) | 207, 276 |
| BisI | GCNGC | 6 cut(s) | 202, 627, 796, 1113, 1144, 1252 |
| BlsI | GCNGC | 6 cut(s) | 203, 628, 797, 1114, 1145, 1253 |
| Bme18I | GGWCC | 3 cut(s) | 133, 483, 524 |
| BmeT110I | CYCGRG | 2 cut(s) | 269, 442 |
| BmgBI | CACGTC | 1 cut(s) | 932 |
| BmgT120I | GGNCC | 4 cut(s) | 133, 483, 524, 805 |
| BmiI | GGNNCC | 3 cut(s) | 526, 924, 1147 |
| BmrI | ACTGGG | 1 cut(s) | 1235 |
| BmsI | GCATC | 1 cut(s) | 529 |
| BmuI | ACTGGG | 1 cut(s) | 1235 |
| BpiI | GAAGAC | 1 cut(s) | 70 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 263, 295, 971, 1003, 1261, 1293 |
| Bpu10I | CCTNAGC | 1 cut(s) | 248 |
| BsaHI | GRCGYC | 1 cut(s) | 1164 |
| BsaI | GGTCTC | 1 cut(s) | 325 |
| BsaJI | CCNNGG | 3 cut(s) | 315, 443, 1216 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 590, 620, 818, 848 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 778, 1030 |
| Bse118I | RCCGGY | 1 cut(s) | 940 |
| Bse1I | ACTGG | 1 cut(s) | 1241 |
| Bse3DI | GCAATG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 3 cut(s) | 315, 443, 1216 |
| BseGI | GGATG | 3 cut(s) | 10, 921, 1071 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 778, 1030 |
| BseMI | GCAATG | 1 cut(s) | 15 |
| BseMII | CTCAG | 3 cut(s) | 231, 294, 724 |
| BseNI | ACTGG | 1 cut(s) | 1241 |
| BseRI | GAGGAG | 1 cut(s) | 287 |
| BseSI | GKGCMC | 1 cut(s) | 892 |
| BseX3I | CGGCCG | 1 cut(s) | 357 |
| BseXI | GCAGC | 4 cut(s) | 613, 782, 1124, 1263 |
| BsgI | GTGCAG | 1 cut(s) | 457 |
| Bsh1236I | CGCG | 2 cut(s) | 298, 1287 |
| Bsh1285I | CGRYCG | 1 cut(s) | 360 |
| BshFI | GGCC | 5 cut(s) | 188, 359, 423, 806, 940 |
| BshNI | GGYRCC | 1 cut(s) | 1145 |
| BsiEI | CGRYCG | 1 cut(s) | 360 |
| BsiHKAI | GWGCWC | 2 cut(s) | 984, 1285 |
| BsiHKCI | CYCGRG | 2 cut(s) | 269, 442 |
| BsiSI | CCGG | 1 cut(s) | 941 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 778, 1030 |
| BsmAI | GTCTC | 5 cut(s) | 325, 593, 922, 1179, 1327 |
| BsmBI | CGTCTC | 2 cut(s) | 593, 922 |
| BsmI | GAATGC | 2 cut(s) | 587, 1253 |
| BsnI | GGCC | 5 cut(s) | 188, 359, 423, 806, 940 |
| Bso31I | GGTCTC | 1 cut(s) | 325 |
| BsoBI | CYCGRG | 2 cut(s) | 269, 442 |
| Bsp1286I | GDGCHC | 3 cut(s) | 892, 984, 1285 |
| Bsp1407I | TGTACA | 1 cut(s) | 702 |
| Bsp143I | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| Bsp19I | CCATGG | 1 cut(s) | 1216 |
| BspACI | CCGC | 5 cut(s) | 131, 201, 863, 1143, 1149 |
| BspANI | GGCC | 5 cut(s) | 188, 359, 423, 806, 940 |
| BspCNI | CTCAG | 3 cut(s) | 230, 293, 723 |
| BspFNI | CGCG | 2 cut(s) | 298, 1287 |
| BspHI | TCATGA | 1 cut(s) | 535 |
| BspLI | GGNNCC | 3 cut(s) | 526, 924, 1147 |
| BspPI | GGATC | 2 cut(s) | 360, 1231 |
| BspT107I | GGYRCC | 1 cut(s) | 1145 |
| BspTNI | GGTCTC | 1 cut(s) | 325 |
| BsrDI | GCAATG | 1 cut(s) | 15 |
| BsrFI | RCCGGY | 1 cut(s) | 940 |
| BsrGI | TGTACA | 1 cut(s) | 702 |
| BsrI | ACTGG | 1 cut(s) | 1241 |
| BssAI | RCCGGY | 1 cut(s) | 940 |
| BssECI | CCNNGG | 3 cut(s) | 315, 443, 1216 |
| BssMI | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| BssNI | GRCGYC | 1 cut(s) | 1164 |
| BssSI | CACGAG | 2 cut(s) | 543, 1278 |
| BssT1I | CCWWGG | 1 cut(s) | 1216 |
| Bst2BI | CACGAG | 2 cut(s) | 543, 1278 |
| Bst4CI | ACNGT | 7 cut(s) | 379, 464, 604, 738, 997, 1025, 1180 |
| Bst6I | CTCTTC | 1 cut(s) | 493 |
| BstACI | GRCGYC | 1 cut(s) | 1164 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 956 |
| BstAUI | TGTACA | 1 cut(s) | 702 |
| BstC8I | GCNNGC | 3 cut(s) | 690, 1153, 1285 |
| BstDEI | CTNAG | 5 cut(s) | 217, 248, 280, 710, 1171 |
| BstDSI | CCRYGG | 1 cut(s) | 1216 |
| BstF5I | GGATG | 3 cut(s) | 10, 921, 1071 |
| BstFNI | CGCG | 2 cut(s) | 298, 1287 |
| BstH2I | RGCGCY | 1 cut(s) | 627 |
| BstHHI | GCGC | 2 cut(s) | 300, 626 |
| BstKTI | GATC | 8 cut(s) | 26, 210, 279, 368, 535, 661, 1239, 1312 |
| BstMAI | GTCTC | 5 cut(s) | 325, 593, 922, 1179, 1327 |
| BstMBI | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| BstMCI | CGRYCG | 1 cut(s) | 360 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 220, 304, 956, 965, 1152 |
| BstSFI | CTRYAG | 1 cut(s) | 263 |
| BstSLI | GKGCMC | 1 cut(s) | 892 |
| BstUI | CGCG | 2 cut(s) | 298, 1287 |
| BstV1I | GCAGC | 4 cut(s) | 613, 782, 1124, 1263 |
| BstV2I | GAAGAC | 1 cut(s) | 70 |
| BstX2I | RGATCY | 2 cut(s) | 207, 276 |
| BstYI | RGATCY | 2 cut(s) | 207, 276 |
| BstZI | CGGCCG | 1 cut(s) | 357 |
| BsuRI | GGCC | 5 cut(s) | 188, 359, 423, 806, 940 |
| BtgI | CCRYGG | 1 cut(s) | 1216 |
| BtrI | CACGTC | 1 cut(s) | 932 |
| BtsCI | GGATG | 3 cut(s) | 10, 921, 1071 |
| BtsIMutI | CAGTG | 1 cut(s) | 1176 |
| Cac8I | GCNNGC | 3 cut(s) | 690, 1153, 1285 |
| CciI | TCATGA | 1 cut(s) | 535 |
| CfoI | GCGC | 2 cut(s) | 300, 626 |
| Cfr10I | RCCGGY | 1 cut(s) | 940 |
| Cfr13I | GGNCC | 4 cut(s) | 133, 483, 524, 805 |
| CseI | GACGC | 2 cut(s) | 948, 1172 |
| Csp6I | GTAC | 2 cut(s) | 703, 976 |
| CviAII | CATG | 5 cut(s) | 536, 566, 700, 1116, 1217 |
| CviQI | GTAC | 2 cut(s) | 703, 976 |
| DdeI | CTNAG | 5 cut(s) | 217, 248, 280, 710, 1171 |
| DpnI | GATC | 8 cut(s) | 25, 209, 278, 367, 534, 660, 1238, 1311 |
| DpnII | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| DraIII | CACNNNGTG | 1 cut(s) | 778 |
| EaeI | YGGCCR | 2 cut(s) | 357, 938 |
| EagI | CGGCCG | 1 cut(s) | 357 |
| Eam1104I | CTCTTC | 1 cut(s) | 493 |
| EarI | CTCTTC | 1 cut(s) | 493 |
| EclXI | CGGCCG | 1 cut(s) | 357 |
| Eco130I | CCWWGG | 1 cut(s) | 1216 |
| Eco31I | GGTCTC | 1 cut(s) | 325 |
| Eco47I | GGWCC | 3 cut(s) | 133, 483, 524 |
| Eco47III | AGCGCT | 1 cut(s) | 625 |
| Eco52I | CGGCCG | 1 cut(s) | 357 |
| Eco57I | CTGAAG | 2 cut(s) | 389, 540 |
| Eco88I | CYCGRG | 2 cut(s) | 269, 442 |
| EcoO109I | RGGNCCY | 1 cut(s) | 524 |
| EcoT14I | CCWWGG | 1 cut(s) | 1216 |
| ErhI | CCWWGG | 1 cut(s) | 1216 |
| Esp3I | CGTCTC | 2 cut(s) | 593, 922 |
| FaeI | CATG | 5 cut(s) | 539, 569, 703, 1119, 1220 |
| FatI | CATG | 5 cut(s) | 535, 565, 699, 1115, 1216 |
| FauI | CCCGC | 1 cut(s) | 870 |
| Fnu4HI | GCNGC | 6 cut(s) | 202, 627, 796, 1113, 1144, 1252 |
| FokI | GGATG | 3 cut(s) | 17, 928, 1078 |
| Fsp4HI | GCNGC | 6 cut(s) | 202, 627, 796, 1113, 1144, 1252 |
| FspBI | CTAG | 3 cut(s) | 1056, 1350, 1358 |
| GlaI | GCGC | 2 cut(s) | 299, 625 |
| GluI | GCNGC | 6 cut(s) | 202, 627, 796, 1113, 1144, 1252 |
| HaeII | RGCGCY | 1 cut(s) | 627 |
| HaeIII | GGCC | 5 cut(s) | 188, 359, 423, 806, 940 |
| HapII | CCGG | 1 cut(s) | 941 |
| HgaI | GACGC | 2 cut(s) | 948, 1172 |
| HhaI | GCGC | 2 cut(s) | 300, 626 |
| Hin1I | GRCGYC | 1 cut(s) | 1164 |
| Hin1II | CATG | 5 cut(s) | 539, 569, 703, 1119, 1220 |
| Hin6I | GCGC | 2 cut(s) | 298, 624 |
| HinP1I | GCGC | 2 cut(s) | 298, 624 |
| HincII | GTYRAC | 1 cut(s) | 382 |
| HindII | GTYRAC | 1 cut(s) | 382 |
| HinfI | GANTC | 4 cut(s) | 48, 230, 679, 695 |
| HpaII | CCGG | 1 cut(s) | 941 |
| HphI | GGTGA | 3 cut(s) | 425, 955, 1306 |
| Hpy166II | GTNNAC | 3 cut(s) | 375, 382, 705 |
| Hpy188I | TCNGA | 6 cut(s) | 220, 283, 316, 454, 713, 927 |
| Hpy188III | TCNNGA | 7 cut(s) | 89, 442, 536, 592, 1184, 1269, 1318 |
| Hpy8I | GTNNAC | 3 cut(s) | 375, 382, 705 |
| Hpy99I | CGWCG | 3 cut(s) | 259, 398, 1205 |
| HpyAV | CCTTC | 7 cut(s) | 312, 515, 669, 778, 1013, 1079, 1333 |
| HpyCH4III | ACNGT | 7 cut(s) | 379, 464, 604, 738, 997, 1025, 1180 |
| HpyCH4IV | ACGT | 4 cut(s) | 371, 931, 1134, 1203 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 220, 304, 956, 965, 1152 |
| HpyF3I | CTNAG | 5 cut(s) | 217, 248, 280, 710, 1171 |
| HpySE526I | ACGT | 4 cut(s) | 371, 931, 1134, 1203 |
| Hsp92I | GRCGYC | 1 cut(s) | 1164 |
| Hsp92II | CATG | 5 cut(s) | 539, 569, 703, 1119, 1220 |
| HspAI | GCGC | 2 cut(s) | 298, 624 |
| Kzo9I | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| LmnI | GCTCC | 1 cut(s) | 928 |
| Lsp1109I | GCAGC | 4 cut(s) | 613, 782, 1124, 1263 |
| LweI | GCATC | 1 cut(s) | 529 |
| MaeI | CTAG | 3 cut(s) | 1056, 1350, 1358 |
| MaeII | ACGT | 4 cut(s) | 371, 931, 1134, 1203 |
| MaeIII | GTNAC | 3 cut(s) | 431, 458, 1051 |
| MalI | GATC | 8 cut(s) | 25, 209, 278, 367, 534, 660, 1238, 1311 |
| MboI | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| MboII | GAAGA | 7 cut(s) | 57, 70, 168, 480, 560, 1084, 1315 |
| MfeI | CAATTG | 1 cut(s) | 963 |
| MflI | RGATCY | 2 cut(s) | 207, 276 |
| MhlI | GDGCHC | 3 cut(s) | 892, 984, 1285 |
| MluCI | AATT | 4 cut(s) | 467, 637, 963, 1375 |
| MlyI | GAGTC | 3 cut(s) | 239, 688, 689 |
| MmeI | TCCRAC | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 2 cut(s) | 402, 1343 |
| MseI | TTAA | 6 cut(s) | 513, 762, 822, 1206, 1290, 1393 |
| MspA1I | CMGCKG | 1 cut(s) | 201 |
| MspI | CCGG | 1 cut(s) | 941 |
| MunI | CAATTG | 1 cut(s) | 963 |
| Mva1269I | GAATGC | 2 cut(s) | 587, 1253 |
| MvnI | CGCG | 2 cut(s) | 298, 1287 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 220, 304, 956, 965, 1152 |
| NcoI | CCATGG | 1 cut(s) | 1216 |
| NdeII | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| NlaIII | CATG | 5 cut(s) | 539, 569, 703, 1119, 1220 |
| NlaIV | GGNNCC | 3 cut(s) | 526, 924, 1147 |
| NmuCI | GTSAC | 3 cut(s) | 431, 458, 1051 |
| PaeR7I | CTCGAG | 1 cut(s) | 269 |
| PagI | TCATGA | 1 cut(s) | 535 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 96 |
| PctI | GAATGC | 2 cut(s) | 587, 1253 |
| PdmI | GAANNNNTTC | 2 cut(s) | 402, 1343 |
| PfeI | GAWTC | 1 cut(s) | 48 |
| PflFI | GACNNNGTC | 1 cut(s) | 95 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 778 |
| PkrI | GCNGC | 6 cut(s) | 203, 628, 797, 1114, 1145, 1253 |
| PleI | GAGTC | 3 cut(s) | 238, 687, 689 |
| PpsI | GAGTC | 3 cut(s) | 238, 687, 689 |
| PpuMI | RGGWCCY | 1 cut(s) | 524 |
| Psp1406I | AACGTT | 1 cut(s) | 1134 |
| Psp5II | RGGWCCY | 1 cut(s) | 524 |
| PspN4I | GGNNCC | 3 cut(s) | 526, 924, 1147 |
| PspPI | GGNCC | 4 cut(s) | 133, 483, 524, 805 |
| PspPPI | RGGWCCY | 1 cut(s) | 524 |
| PspXI | VCTCGAGB | 1 cut(s) | 269 |
| PsuI | RGATCY | 2 cut(s) | 207, 276 |
| PsyI | GACNNNGTC | 1 cut(s) | 95 |
| RsaI | GTAC | 2 cut(s) | 704, 977 |
| RsaNI | GTAC | 2 cut(s) | 703, 976 |
| SaqAI | TTAA | 6 cut(s) | 513, 762, 822, 1206, 1290, 1393 |
| SatI | GCNGC | 6 cut(s) | 202, 627, 796, 1113, 1144, 1252 |
| Sau3AI | GATC | 8 cut(s) | 23, 207, 276, 365, 532, 658, 1236, 1309 |
| Sau96I | GGNCC | 4 cut(s) | 133, 483, 524, 805 |
| SchI | GAGTC | 3 cut(s) | 239, 688, 689 |
| SduI | GDGCHC | 3 cut(s) | 892, 984, 1285 |
| SfaNI | GCATC | 1 cut(s) | 529 |
| SfcI | CTRYAG | 1 cut(s) | 263 |
| Sfr274I | CTCGAG | 1 cut(s) | 269 |
| SinI | GGWCC | 3 cut(s) | 133, 483, 524 |
| SlaI | CTCGAG | 1 cut(s) | 269 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| Sse9I | AATT | 4 cut(s) | 467, 637, 963, 1375 |
| SsiI | CCGC | 5 cut(s) | 131, 201, 863, 1143, 1149 |
| SspMI | CTAG | 3 cut(s) | 1056, 1350, 1358 |
| StyI | CCWWGG | 1 cut(s) | 1216 |
| TaaI | ACNGT | 7 cut(s) | 379, 464, 604, 738, 997, 1025, 1180 |
| TaiI | ACGT | 4 cut(s) | 374, 934, 1137, 1206 |
| TaqI | TCGA | 9 cut(s) | 90, 99, 233, 254, 270, 364, 396, 1183, 1268 |
| TasI | AATT | 4 cut(s) | 467, 637, 963, 1375 |
| TatI | WGTACW | 1 cut(s) | 702 |
| TauI | GCSGC | 2 cut(s) | 204, 1146 |
| TfiI | GAWTC | 1 cut(s) | 48 |
| Tru1I | TTAA | 6 cut(s) | 513, 762, 822, 1206, 1290, 1393 |
| Tru9I | TTAA | 6 cut(s) | 513, 762, 822, 1206, 1290, 1393 |
| TscAI | CASTG | 1 cut(s) | 1183 |
| TseFI | GTSAC | 3 cut(s) | 431, 458, 1051 |
| TseI | GCWGC | 4 cut(s) | 626, 795, 1112, 1251 |
| Tsp45I | GTSAC | 3 cut(s) | 431, 458, 1051 |
| TspDTI | ATGAA | 6 cut(s) | 40, 550, 554, 567, 1245, 1368 |
| TspGWI | ACGGA | 3 cut(s) | 611, 730, 1006 |
| TspRI | CASTG | 1 cut(s) | 1183 |
| Tth111I | GACNNNGTC | 1 cut(s) | 95 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 778 |
| VpaK11BI | GGWCC | 3 cut(s) | 133, 483, 524 |
| XapI | RAATTY | 2 cut(s) | 467, 637 |
| XhoI | CTCGAG | 1 cut(s) | 269 |
| XmnI | GAANNNNTTC | 2 cut(s) | 402, 1343 |
| XspI | CTAG | 3 cut(s) | 1056, 1350, 1358 |