Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0013015

Physical Location & Seq

Genomic Coordinates Reverse (-)

27553535 .. 27555635

Gene Structure 2101 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0262400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGTTGGAGTCTCAATTCTTGTAACATGTGTAATCTGCCTAATGTTAGTGGTCTTCACAGACCATGCTCAAGGTTTAGGTGTCAACTGGGGAGCAATGGCGTCGCACCCTTTGGATCCCAGCAATGTAGTAAAAATGCTCAAGGACAATGGGATCAAGAGAGTAAAGCTTTTCGACGCAGAGCCTGCCACCATGAAGGCCTTGTCCGGGTCAGGTATTTCGGTCATTGTTGGAATTCCCAACGAAAAATTGGCCTCAATTTCTTCGGCTTACAAACATGCCCAAGAGTGGGTGAAAGAAAATATCACCAAATATGATCATAATGGGGGCGCTGATATCAGCTATGTGGCTGTTGGAAACGAGCCATTCTTAACAAGTTACAATGGAAGTTTTCTCAAGACTACTTTTCCAGCATTGCAAAACATTCAAAAGGCCCTAGATGAAGCTGGCACTAGACAGAAAATCAAAGCCATAGTGCCCTTCAACGCTGATGTTTATGAATCTGCTTCGGGCAAACCATCGGATGGTCAGTTCCGAAAGGACATCAAAAGTGAGATGCTCAAGATACTAGGTTTGCTCAAGAGCAATAAGTCTCCATTTTTCGTTAACATATATCCCTTCCTTAGTCTCCAGCAAAGCTCTCATTTCCCCAAAGAATTTGCCTTCTTTGATGGTACTAGCAAACCTGTTGAAGACAACAACTACCAATATACCAATGTGTTTGATGCAAATCATGACACACTTATTTGGTCACTCAAGAAGGTTGGGTACCAGGACTTGGACATAGTTATTGGAGAAGCCGGATGGCCTACAGATGGTGACAAGAATGCCAATAAAATTTTGGCCAAGAAATTCTATGATGGACTTCTCAAGAAATTAGCAAAGGCGGACGGAACCCCTCTTCGAAAAGGGTACTTGGAAGTGTACCTTTTTGGGCTCACTGACGAGGACAAAAAAAGTATTGCCCCAGGGGACTTTGAGCGCCACTGGGGCATCTTAGGCTATGATGGAAAACCCAAGTTCCCGATGGACCTCACCGGGAAAGGGAACAATAACATGCTCAAGGCGGTACAAGGAGTGCAGTACATGGACAAGCAATGGTGTGTCTTGAACGGCGATGTTCGAAATGAGACTCTGTTAAAAACCGAACTCAGTTACGCTTGTTCTCAGACGGATTGCACATCTTTGGGAAGTGGAAGGTCATGCGATTTGGATTTGCCGGGGAAAGTCTCCTATGCTTTCAATTCTTTCTTCCAAAGCAGAGACCAAGACGTTCGGACCTGCAATTTTGATGGCAAGGGAACGATTACAAAGAACGATCCTTCTAAAGGCAATTGCGTATTCAATATACAGATTTACAGTGCGGGAGTGAGGCATCAAGTGACTTATGCATTGAGTATCTTTGCAGGACTAGTCTTGATGACTTTCTTACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0080135 GO:0097159 GO:0140110 GO:1900034 GO:1900036 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000070 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

478

Amino Acids

52.76

Weight (kDa)

8.22

Isoelectric Point (pI)

30.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	26 - 344	8.7e-62	Glycosyl hydrolases family 17
X8	PF07983	366 - 435	2e-13	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013015)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20880 AT4G28140
fragaria_vesca	FvH4_6g26090
malus_domestica	MD09G1252000.v1.1 MD17G1244300.v1.1
prunus_persica	Prupe.3G157100_v2.0.a1
pyrus_communis	pycom09g16830 pycom17g24710
rosa_chinensis	RchiOBHm_Chr2g0126301
rosa_laevigata	RLG00000018898
rosa_multiflora	Rmu_ssc0000264.1_g000034
rosa_roxburghii	Rroxscaffold_2G00117280
rosa_rugosa	Rorug02G0262400
rosa_samantha	Rh2AG319300 Rh2BG327700 Rh2CG307700 Rh2DG347300
rosa_wichuraiana	Rw2G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1289
Acc65I	GGTACC	1 cut(s)	768
AccB1I	GGYRCC	1 cut(s)	768
AccB7I	CCANNNNNTGG	2 cut(s)	524, 778
AciI	CCGC	3 cut(s)	887, 1067, 1364
AclWI	GGATC	4 cut(s)	110, 123, 161, 1313
AcoI	YGGCCR	1 cut(s)	843
AcsI	RAATTY	4 cut(s)	234, 656, 837, 851
AcyI	GRCGYC	1 cut(s)	101
AfaI	GTAC	6 cut(s)	676, 770, 914, 926, 1071, 1085
AfiI	CCNNNNNNNGG	8 cut(s)	207, 288, 289, 524, 778, 815, 1044, 1328
AflIII	ACRYGT	1 cut(s)	26
AgsI	TTSAA	6 cut(s)	428, 484, 692, 1111, 1243, 1345
AhlI	ACTAGT	1 cut(s)	1411
AjnI	CCWGG	2 cut(s)	771, 967
AloI	GAACNNNNNNTCC	2 cut(s)	515, 547
AluBI	AGCT	4 cut(s)	169, 342, 446, 639
AluI	AGCT	4 cut(s)	169, 342, 446, 639
Alw26I	GTCTC	6 cut(s)	16, 597, 632, 1124, 1234, 1257
AlwI	GGATC	4 cut(s)	110, 123, 161, 1313
AlwNI	CAGNNNCTG	1 cut(s)	185
AoxI	GGCC	5 cut(s)	198, 252, 432, 806, 843
ApoI	RAATTY	4 cut(s)	234, 656, 837, 851
Asp718I	GGTACC	1 cut(s)	768
AspLEI	GCGC	2 cut(s)	332, 984
AspS9I	GGNCC	3 cut(s)	433, 1030, 1278
AsuC2I	CCSGG	3 cut(s)	208, 1039, 1221
AsuHPI	GGTGA	4 cut(s)	298, 304, 830, 1027
AsuII	TTCGAA	2 cut(s)	904, 1123
AvaII	GGWCC	2 cut(s)	1030, 1278
BaeGI	GKGCMC	1 cut(s)	480
BalI	TGGCCA	1 cut(s)	845
BamHI	GGATCC	1 cut(s)	115
BanI	GGYRCC	1 cut(s)	768
BanII	GRGCYC	1 cut(s)	939
BarI	GAAGNNNNNNTAC	2 cut(s)	752, 784
BbsI	GAAGAC	2 cut(s)	46, 699
BccI	CCATC	9 cut(s)	518, 526, 665, 798, 809, 854, 1001, 1021, 1286
BceAI	ACGGC	1 cut(s)	1129
BcgI	CGANNNNNNTGC	2 cut(s)	84, 118
BciT130I	CCWGG	2 cut(s)	773, 969
BclI	TGATCA	1 cut(s)	316
BcnI	CCSGG	3 cut(s)	208, 1039, 1221
BcoDI	GTCTC	6 cut(s)	16, 597, 632, 1124, 1234, 1257
BcuI	ACTAGT	1 cut(s)	1411
BfaI	CTAG	5 cut(s)	437, 453, 569, 678, 1412
BfmI	CTRYAG	1 cut(s)	810
BfoI	RGCGCY	2 cut(s)	333, 985
BfuAI	ACCTGC	1 cut(s)	1289
BglI	GCCNNNNNGGC	1 cut(s)	990
Bme1390I	CCNGG	5 cut(s)	208, 773, 969, 1039, 1221
Bme18I	GGWCC	2 cut(s)	1030, 1278
BmgT120I	GGNCC	3 cut(s)	433, 1030, 1278
BmiI	GGNNCC	3 cut(s)	117, 770, 895
BmrFI	CCNGG	5 cut(s)	208, 773, 969, 1039, 1221
BmrI	ACTGGG	2 cut(s)	97, 997
BmsI	GCATC	4 cut(s)	546, 715, 1002, 1384
BmuI	ACTGGG	2 cut(s)	97, 997
BpiI	GAAGAC	2 cut(s)	46, 699
BpmI	CTGGAG	1 cut(s)	614
Bpu14I	TTCGAA	2 cut(s)	904, 1123
BpuEI	CTTGAG	8 cut(s)	54, 125, 380, 545, 563, 740, 854, 1046
BpuMI	CCSGG	3 cut(s)	208, 1039, 1221
BsaBI	GATNNNNATC	1 cut(s)	729
BsaHI	GRCGYC	1 cut(s)	101
BsaI	GGTCTC	1 cut(s)	1257
BsaJI	CCNNGG	3 cut(s)	967, 968, 1220
Bsc4I	CCNNNNNNNGG	8 cut(s)	207, 288, 289, 524, 778, 815, 1044, 1328
Bse1I	ACTGG	2 cut(s)	92, 992
Bse3DI	GCAATG	4 cut(s)	102, 130, 413, 1103
Bse8I	GATNNNNATC	1 cut(s)	729
BseBI	CCWGG	2 cut(s)	773, 969
BseDI	CCNNGG	3 cut(s)	967, 968, 1220
BseGI	GGATG	2 cut(s)	529, 809
BseJI	GATNNNNATC	1 cut(s)	729
BseLI	CCNNNNNNNGG	8 cut(s)	207, 288, 289, 524, 778, 815, 1044, 1328
BseMI	GCAATG	4 cut(s)	102, 130, 413, 1103
BseMII	CTCAG	2 cut(s)	1165, 1181
BseNI	ACTGG	2 cut(s)	92, 992
BseSI	GKGCMC	1 cut(s)	480
BseYI	CCCAGC	1 cut(s)	119
BsgI	GTGCAG	1 cut(s)	1100
BshFI	GGCC	5 cut(s)	200, 254, 434, 808, 845
BshNI	GGYRCC	1 cut(s)	768
BsiSI	CCGG	4 cut(s)	207, 801, 1038, 1220
BslFI	GGGAC	1 cut(s)	986
BslI	CCNNNNNNNGG	8 cut(s)	207, 288, 289, 524, 778, 815, 1044, 1328
BsmAI	GTCTC	6 cut(s)	16, 597, 632, 1124, 1234, 1257
BsmFI	GGGAC	1 cut(s)	986
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	5 cut(s)	200, 254, 434, 808, 845
Bso31I	GGTCTC	1 cut(s)	1257
Bsp119I	TTCGAA	2 cut(s)	904, 1123
Bsp1286I	GDGCHC	2 cut(s)	480, 939
Bsp143I	GATC	4 cut(s)	115, 153, 316, 1318
BspACI	CCGC	3 cut(s)	887, 1067, 1364
BspANI	GGCC	5 cut(s)	200, 254, 434, 808, 845
BspCNI	CTCAG	2 cut(s)	1164, 1180
BspHI	TCATGA	1 cut(s)	733
BspLI	GGNNCC	3 cut(s)	117, 770, 895
BspMI	ACCTGC	1 cut(s)	1289
BspPI	GGATC	4 cut(s)	110, 123, 161, 1313
BspT104I	TTCGAA	2 cut(s)	904, 1123
BspT107I	GGYRCC	1 cut(s)	768
BspTNI	GGTCTC	1 cut(s)	1257
BsrDI	GCAATG	4 cut(s)	102, 130, 413, 1103
BsrI	ACTGG	2 cut(s)	92, 992
BssECI	CCNNGG	3 cut(s)	967, 968, 1220
BssMI	GATC	4 cut(s)	115, 153, 316, 1318
BssNI	GRCGYC	1 cut(s)	101
Bst2UI	CCWGG	2 cut(s)	773, 969
Bst4CI	ACNGT	1 cut(s)	1361
Bst6I	CTCTTC	1 cut(s)	906
BstACI	GRCGYC	1 cut(s)	101
BstAPI	GCANNNNNTGC	1 cut(s)	185
BstBI	TTCGAA	2 cut(s)	904, 1123
BstC8I	GCNNGC	2 cut(s)	186, 448
BstDEI	CTNAG	4 cut(s)	623, 997, 1151, 1167
BstENI	CCTNNNNNAGG	1 cut(s)	1326
BstF5I	GGATG	2 cut(s)	529, 809
BstH2I	RGCGCY	2 cut(s)	333, 985
BstHHI	GCGC	2 cut(s)	332, 984
BstKTI	GATC	4 cut(s)	118, 156, 319, 1321
BstMAI	GTCTC	6 cut(s)	16, 597, 632, 1124, 1234, 1257
BstMBI	GATC	4 cut(s)	115, 153, 316, 1318
BstMWI	GCNNNNNNNGC	3 cut(s)	185, 990, 999
BstNI	CCWGG	2 cut(s)	773, 969
BstNSI	RCATGY	3 cut(s)	30, 281, 1060
BstSCI	CCNGG	5 cut(s)	206, 771, 967, 1037, 1219
BstSFI	CTRYAG	1 cut(s)	810
BstSLI	GKGCMC	1 cut(s)	480
BstV2I	GAAGAC	2 cut(s)	46, 699
BstX2I	RGATCY	1 cut(s)	115
BstYI	RGATCY	1 cut(s)	115
BsuRI	GGCC	5 cut(s)	200, 254, 434, 808, 845
BtgZI	GCGATG	1 cut(s)	1131
BtsCI	GGATG	2 cut(s)	529, 809
BtsIMutI	CAGTG	3 cut(s)	939, 985, 1366
BveI	ACCTGC	1 cut(s)	1289
Cac8I	GCNNGC	2 cut(s)	186, 448
CaiI	CAGNNNCTG	1 cut(s)	185
CciI	TCATGA	1 cut(s)	733
CfoI	GCGC	2 cut(s)	332, 984
Cfr13I	GGNCC	3 cut(s)	433, 1030, 1278
CseI	GACGC	2 cut(s)	90, 185
Csp6I	GTAC	6 cut(s)	675, 769, 913, 925, 1070, 1084
CviAII	CATG	8 cut(s)	27, 65, 193, 278, 734, 1057, 1087, 1203
CviQI	GTAC	6 cut(s)	675, 769, 913, 925, 1070, 1084
DdeI	CTNAG	4 cut(s)	623, 997, 1151, 1167
DpnI	GATC	4 cut(s)	117, 155, 318, 1320
DpnII	GATC	4 cut(s)	115, 153, 316, 1318
EaeI	YGGCCR	1 cut(s)	843
Eam1104I	CTCTTC	1 cut(s)	906
EarI	CTCTTC	1 cut(s)	906
EciI	GGCGGA	1 cut(s)	902
Eco147I	AGGCCT	1 cut(s)	200
Eco24I	GRGCYC	1 cut(s)	939
Eco31I	GGTCTC	1 cut(s)	1257
Eco32I	GATATC	1 cut(s)	337
Eco47I	GGWCC	2 cut(s)	1030, 1278
EcoNI	CCTNNNNNAGG	1 cut(s)	1326
EcoO109I	RGGNCCY	1 cut(s)	433
EcoRI	GAATTC	1 cut(s)	234
EcoRII	CCWGG	2 cut(s)	771, 967
EcoRV	GATATC	1 cut(s)	337
EcoT22I	ATGCAT	1 cut(s)	1393
EcoT38I	GRGCYC	1 cut(s)	939
FaeI	CATG	8 cut(s)	30, 68, 196, 281, 737, 1060, 1090, 1206
FalI	AAGNNNNNCTT	2 cut(s)	912, 944
FaqI	GGGAC	1 cut(s)	986
FatI	CATG	8 cut(s)	26, 64, 192, 277, 733, 1056, 1086, 1202
FauI	CCCGC	1 cut(s)	1357
FbaI	TGATCA	1 cut(s)	316
FokI	GGATG	2 cut(s)	536, 816
FriOI	GRGCYC	1 cut(s)	939
FspBI	CTAG	5 cut(s)	437, 453, 569, 678, 1412
GlaI	GCGC	2 cut(s)	331, 983
GsaI	CCCAGC	1 cut(s)	123
GsuI	CTGGAG	1 cut(s)	614
HaeII	RGCGCY	2 cut(s)	333, 985
HaeIII	GGCC	5 cut(s)	200, 254, 434, 808, 845
HapII	CCGG	4 cut(s)	207, 801, 1038, 1220
HgaI	GACGC	2 cut(s)	90, 185
HhaI	GCGC	2 cut(s)	332, 984
Hin1I	GRCGYC	1 cut(s)	101
Hin1II	CATG	8 cut(s)	30, 68, 196, 281, 737, 1060, 1090, 1206
Hin6I	GCGC	2 cut(s)	330, 982
HinP1I	GCGC	2 cut(s)	330, 982
HincII	GTYRAC	2 cut(s)	85, 607
HindII	GTYRAC	2 cut(s)	85, 607
HindIII	AAGCTT	1 cut(s)	167
HinfI	GANTC	3 cut(s)	9, 500, 1132
HpaI	GTTAAC	1 cut(s)	607
HpaII	CCGG	4 cut(s)	207, 801, 1038, 1220
HphI	GGTGA	4 cut(s)	298, 304, 830, 1027
Hpy166II	GTNNAC	3 cut(s)	85, 607, 925
Hpy188I	TCNGA	4 cut(s)	523, 536, 1170, 1278
Hpy8I	GTNNAC	3 cut(s)	85, 607, 925
Hpy99I	CGWCG	2 cut(s)	106, 179
HpyAV	CCTTC	7 cut(s)	190, 490, 628, 673, 754, 1191, 1332
HpyCH4III	ACNGT	1 cut(s)	1361
HpyCH4IV	ACGT	1 cut(s)	1272
HpyCH4V	TGCA	7 cut(s)	418, 728, 1081, 1179, 1284, 1391, 1406
HpyF10VI	GCNNNNNNNGC	3 cut(s)	185, 990, 999
HpyF3I	CTNAG	4 cut(s)	623, 997, 1151, 1167
HpySE526I	ACGT	1 cut(s)	1272
Hsp92I	GRCGYC	1 cut(s)	101
Hsp92II	CATG	8 cut(s)	30, 68, 196, 281, 737, 1060, 1090, 1206
HspAI	GCGC	2 cut(s)	330, 982
KpnI	GGTACC	1 cut(s)	772
Ksp22I	TGATCA	1 cut(s)	316
KspAI	GTTAAC	1 cut(s)	607
Kzo9I	GATC	4 cut(s)	115, 153, 316, 1318
LmnI	GCTCC	1 cut(s)	92
LweI	GCATC	4 cut(s)	546, 715, 1002, 1384
MaeI	CTAG	5 cut(s)	437, 453, 569, 678, 1412
MaeII	ACGT	1 cut(s)	1272
MaeIII	GTNAC	6 cut(s)	22, 377, 750, 818, 1154, 1381
MalI	GATC	4 cut(s)	117, 155, 318, 1320
MboI	GATC	4 cut(s)	115, 153, 316, 1318
MboII	GAAGA	5 cut(s)	46, 255, 704, 893, 1243
MfeI	CAATTG	1 cut(s)	1333
MflI	RGATCY	1 cut(s)	115
MhlI	GDGCHC	2 cut(s)	480, 939
MlsI	TGGCCA	1 cut(s)	845
MluNI	TGGCCA	1 cut(s)	845
MlyI	GAGTC	2 cut(s)	18, 1126
MmeI	TCCRAC	2 cut(s)	211, 334
MnlI	CCTC	5 cut(s)	265, 909, 940, 1043, 1365
Mox20I	TGGCCA	1 cut(s)	845
Mph1103I	ATGCAT	1 cut(s)	1393
MscI	TGGCCA	1 cut(s)	845
MseI	TTAA	4 cut(s)	371, 606, 1139, 1435
Msp20I	TGGCCA	1 cut(s)	845
MspI	CCGG	4 cut(s)	207, 801, 1038, 1220
MspR9I	CCNGG	5 cut(s)	208, 773, 969, 1039, 1221
MunI	CAATTG	1 cut(s)	1333
Mva1269I	GAATGC	1 cut(s)	832
MvaI	CCWGG	2 cut(s)	773, 969
MwoI	GCNNNNNNNGC	3 cut(s)	185, 990, 999
NciI	CCSGG	3 cut(s)	208, 1039, 1221
NdeII	GATC	4 cut(s)	115, 153, 316, 1318
NlaIII	CATG	8 cut(s)	30, 68, 196, 281, 737, 1060, 1090, 1206
NlaIV	GGNNCC	3 cut(s)	117, 770, 895
NmuCI	GTSAC	3 cut(s)	750, 818, 1381
NsiI	ATGCAT	1 cut(s)	1393
NspI	RCATGY	3 cut(s)	30, 281, 1060
NspV	TTCGAA	2 cut(s)	904, 1123
PagI	TCATGA	1 cut(s)	733
PasI	CCCWGGG	1 cut(s)	968
PceI	AGGCCT	1 cut(s)	200
PciI	ACATGT	1 cut(s)	26
PctI	GAATGC	1 cut(s)	832
PfeI	GAWTC	1 cut(s)	500
PflMI	CCANNNNNTGG	2 cut(s)	524, 778
PleI	GAGTC	2 cut(s)	17, 1126
PpsI	GAGTC	2 cut(s)	17, 1126
PscI	ACATGT	1 cut(s)	26
Psp6I	CCWGG	2 cut(s)	771, 967
PspFI	CCCAGC	1 cut(s)	119
PspGI	CCWGG	2 cut(s)	771, 967
PspN4I	GGNNCC	3 cut(s)	117, 770, 895
PspPI	GGNCC	3 cut(s)	433, 1030, 1278
PstNI	CAGNNNCTG	1 cut(s)	185
PsuI	RGATCY	1 cut(s)	115
RsaI	GTAC	6 cut(s)	676, 770, 914, 926, 1071, 1085
RsaNI	GTAC	6 cut(s)	675, 769, 913, 925, 1070, 1084
SaqAI	TTAA	4 cut(s)	371, 606, 1139, 1435
Sau3AI	GATC	4 cut(s)	115, 153, 316, 1318
Sau96I	GGNCC	3 cut(s)	433, 1030, 1278
SchI	GAGTC	2 cut(s)	18, 1126
ScrFI	CCNGG	5 cut(s)	208, 773, 969, 1039, 1221
SduI	GDGCHC	2 cut(s)	480, 939
SfaNI	GCATC	4 cut(s)	546, 715, 1002, 1384
SfcI	CTRYAG	1 cut(s)	810
SfuI	TTCGAA	2 cut(s)	904, 1123
SinI	GGWCC	2 cut(s)	1030, 1278
SmlI	CTYRAG	8 cut(s)	69, 140, 395, 560, 578, 755, 869, 1061
SmoI	CTYRAG	8 cut(s)	69, 140, 395, 560, 578, 755, 869, 1061
SpeI	ACTAGT	1 cut(s)	1411
SseBI	AGGCCT	1 cut(s)	200
SsiI	CCGC	3 cut(s)	887, 1067, 1364
SspMI	CTAG	5 cut(s)	437, 453, 569, 678, 1412
StuI	AGGCCT	1 cut(s)	200
StyD4I	CCNGG	5 cut(s)	206, 771, 967, 1037, 1219
TaaI	ACNGT	1 cut(s)	1361
TaiI	ACGT	1 cut(s)	1275
TaqI	TCGA	3 cut(s)	174, 904, 1123
TaqII	GACCGA	1 cut(s)	211
TatI	WGTACW	1 cut(s)	1083
TfiI	GAWTC	1 cut(s)	500
Tru1I	TTAA	4 cut(s)	371, 606, 1139, 1435
Tru9I	TTAA	4 cut(s)	371, 606, 1139, 1435
TscAI	CASTG	3 cut(s)	946, 992, 1366
TseFI	GTSAC	3 cut(s)	750, 818, 1381
Tsp45I	GTSAC	3 cut(s)	750, 818, 1381
TspDTI	ATGAA	3 cut(s)	209, 456, 513
TspGWI	ACGGA	2 cut(s)	906, 1187
TspRI	CASTG	3 cut(s)	946, 992, 1366
Van91I	CCANNNNNTGG	2 cut(s)	524, 778
VpaK11BI	GGWCC	2 cut(s)	1030, 1278
XagI	CCTNNNNNAGG	1 cut(s)	1326
XapI	RAATTY	4 cut(s)	234, 656, 837, 851
XceI	RCATGY	3 cut(s)	30, 281, 1060
XcmI	CCANNNNNNNNNTGG	3 cut(s)	247, 838, 1024
XspI	CTAG	5 cut(s)	437, 453, 569, 678, 1412
Zsp2I	ATGCAT	1 cut(s)	1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.