Rorug02G0264900

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0010583
Physical Location & Seq
Forward (+)
27959804 .. 27961681
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0264900.1

Sequence Viewer

Length: 1878 bp
ATGACATACGCTCAAAAATTGATCAAAACGACGTCGAAGATAGCAGCCTTTGCAAGGTTGGGTCACATCAACCATGCCCGCCAACTGTTCGACGAAATGCCTCACCGAGACTCCATTGCTTGGAACGCAATGCTCACCGCCTACACCCAACTGGGCTTCCACCACCAAGCTCTCTCTCTTCTCCGCAGCATGAGAATCTCCAACGCCCGGCCCGATCACTTCACCTTCACTGCTACGCTAAGCGCCTGTGCCGGCGCATGTAACCTTCGATGTGGAACCAAATTACATTGTTTACTCACTGTTTTGGGTTACCAGTCTTACTTGCCGGTCAACAATGCGCTTATTGATATGTATGGCAAGTGCTTGGAGCCTTGCAGTGCTACCAGAGTGTTTGAAGAGATGGAACTTAGGAATGAAGTAACTTGGTGTTCTTTGTTATTTGCATACACAAACTCCGGACTGTTTGACGCCGCGCGTCAAGTGTTTTGTGTAATGCCTAGAAGGGTGGAGAGAGCTTGGAATGTTATGATTGTGGGTTATGCACGAAACGGGGAGGTGGAGATGTGTTTGGGGTTGTTGAAAGAGATGAAAGAGAGTTTGTGCCGGCCAGATCAGTGGACTTTCAGTGCTCTTATGAATGCTTGCGCGGAGGCATTGGAATTTCGGTGTGGTTGCATGCTGCATGCTTTCATCATTAAAAGTGGTTGGAGCTCTTCTGCGGAGGTGAAGAACTCGGTTTTGAGTTTTTATGCTGAATTAGGTTGCCTGGGCAATGCGGTGAAGGTGTTTGAGTCCGGTGGAACTCTAACACAGGTGTCTTGGAATGCGATGATTGATACCTACATGAAACTGGGAAATACCCATGAAGCACTTCGTGTGTTTCAGCTATCCCCTGAACAGAATATTGTCTCATGGACATCTATGATCTCAGGGTATGCAAGAAATGGACGTGGGGAAGAAGCTGCAATGTTCTTTGTTGATATGTTGAGAACTGGACTCGAACCAGATGATTTCAGTTTTACTGCCGTCCTTCATGCATGTTCAAACTTAGCATTACTTGGATGCGGGGAAATGTTTCATGGTTCCATAATTCACTATGGTTTCCATGCATATGCGTTTATTGGGAACGGCTTGGTTAACATGTATGCTAAATGCGGGGATTTAAAAGGGTCCATCCGTGCATTCCGTGATATATTTCACAAGGATTTGGTATCTTGGAACGCGATGTTGTTTGCATTTGGATTACATGGAAAAGCTATCGAAACTCTACAATTTTTTGAACAAATGGTGGTAAATGGGGTCAAACCAGATAATGTTACCTTTATCGGCTTGTTGATGGCTTGCAGCCACTCTGGATTGATAGGAGAAAGTCGTGCACTTTTTGAAACAATGCAGACAATTTATGGGCTCTCTCCTGACAAATATCATGTGGCATGCATGGTGGATATGCTTGGAAGAGGTGGTTACTTAGCTGAAGCTAAGGAACTGGCTGATAAGTATTGTTCAGTATATAATGCTAAGATCAGCTCGTGTGAAGCTCTGCTTGGAGCATGTTCTGCACATGGGGAGTTGGGATTTGGAAAATATTTGGGGGAAACGCTGAAAATAACAGAACCACATAATGAGACAAGCTATGTGTTATTGTCAAATTTGTACTGTGCAAGTGGGCAATGGAAGGAAGCTGAAATGGTTAGGAAGAGAATGGCAGATCAAGGGGTGAAGAAATTGCCTGGATGTAGTTGGATAGAAGTGAGAAACAAGGTAATGGCTTTTGTTGCAGGGAAGAATTCTGATCCATTTATGGATGACGTGTATAATATACTACAGTACATTGATTTTGAAATCAGGAATCCATACATTGTTGATATTAATTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

625

Amino Acids

69.75

Weight (kDa)

6.55

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 37 - 84 2.1e-08 PPR repeat family
PPR_2 PF13041 172 - 216 4.4e-12 PPR repeat family
PPR PF01535 172 - 199 1.9e-07 PPR repeat
PPR_2 PF13041 301 - 349 4.7e-13 PPR repeat family
PPR PF01535 303 - 332 9.2e-08 PPR repeat
PPR_2 PF13041 402 - 449 1.4e-07 PPR repeat family
E_motif PF20431 523 - 583 9.1e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 120
AccII CGCG 4 cut(s) 473, 475, 647, 1223
AccIII TCCGGA 1 cut(s) 455
AciI CCGC 9 cut(s) 79, 138, 184, 471, 647, 719, 776, 1065, 1155
AclWI GGATC 1 cut(s) 1787
AcoI YGGCCR 1 cut(s) 605
AcsI RAATTY 3 cut(s) 659, 1648, 1786
AcuI CTGAAG 1 cut(s) 1494
AcyI GRCGYC 2 cut(s) 32, 468
AdeI CACNNNGTG 1 cut(s) 875
AfaI GTAC 2 cut(s) 1655, 1829
AfiI CCNNNNNNNGG 3 cut(s) 54, 120, 207
AflIII ACRYGT 2 cut(s) 1140, 1809
AgsI TTSAA 6 cut(s) 395, 580, 1044, 1280, 1385, 1841
AjiI CACGTC 2 cut(s) 950, 1810
AjnI CCWGG 2 cut(s) 765, 1729
AjuI GAANNNNNNNTTGG 2 cut(s) 1527, 1559
Alw21I GWGCWC 3 cut(s) 631, 713, 1378
Alw26I GTCTC 3 cut(s) 102, 913, 1619
Alw44I GTGCAC 1 cut(s) 1374
AlwI GGATC 1 cut(s) 1787
Aor13HI TCCGGA 1 cut(s) 455
AoxI GGCC 2 cut(s) 209, 605
ApaLI GTGCAC 1 cut(s) 1374
ApeKI GCWGC 5 cut(s) 44, 186, 679, 962, 1344
ApoI RAATTY 3 cut(s) 659, 1648, 1786
AseI ATTAAT 1 cut(s) 1869
Asp700I GAANNNNTTC 2 cut(s) 870, 1074
AspLEI GCGC 5 cut(s) 245, 257, 340, 475, 647
AspS9I GGNCC 2 cut(s) 210, 1170
AsuC2I CCSGG 1 cut(s) 208
AsuHPI GGTGA 6 cut(s) 95, 127, 214, 736, 790, 1729
AvaII GGWCC 1 cut(s) 1170
BaeGI GKGCMC 1 cut(s) 1378
BanII GRGCYC 2 cut(s) 713, 1410
BauI CACGAG 1 cut(s) 1528
Bbv12I GWGCWC 3 cut(s) 631, 713, 1378
BbvI GCAGC 5 cut(s) 56, 198, 666, 949, 1356
BccI CCATC 3 cut(s) 394, 1181, 1330
BceAI ACGGC 2 cut(s) 1010, 1144
BciT130I CCWGG 2 cut(s) 767, 1731
BclI TGATCA 1 cut(s) 21
BcnI CCSGG 1 cut(s) 208
BcoDI GTCTC 3 cut(s) 102, 913, 1619
BfaI CTAG 1 cut(s) 498
BfmI CTRYAG 1 cut(s) 1823
BfoI RGCGCY 1 cut(s) 246
BisI GCNGC 6 cut(s) 45, 187, 471, 680, 963, 1345
BlpI GCTNAGC 1 cut(s) 239
BlsI GCNGC 6 cut(s) 46, 188, 472, 681, 964, 1346
Bme1390I CCNGG 3 cut(s) 208, 767, 1731
Bme18I GGWCC 1 cut(s) 1170
BmgBI CACGTC 2 cut(s) 950, 1810
BmgT120I GGNCC 2 cut(s) 210, 1170
BmiI GGNNCC 4 cut(s) 277, 369, 1084, 1171
BmrFI CCNGG 3 cut(s) 208, 767, 1731
BmrI ACTGGG 2 cut(s) 161, 860
BmsI GCATC 1 cut(s) 1052
BmuI ACTGGG 2 cut(s) 161, 860
Bpu10I CCTNAGC 1 cut(s) 1479
Bpu1102I GCTNAGC 1 cut(s) 239
BpuMI CCSGG 1 cut(s) 208
BsaHI GRCGYC 2 cut(s) 32, 468
BsaJI CCNNGG 1 cut(s) 766
BsaWI WCCGGW 2 cut(s) 455, 794
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 437, 467
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 120, 207
Bse118I RCCGGY 3 cut(s) 251, 325, 603
Bse1I ACTGG 5 cut(s) 156, 313, 855, 997, 1491
Bse3DI GCAATG 5 cut(s) 114, 135, 778, 972, 1676
BseAI TCCGGA 1 cut(s) 455
BseBI CCWGG 2 cut(s) 767, 1731
BseDI CCNNGG 1 cut(s) 766
BseGI GGATG 4 cut(s) 1067, 1173, 1739, 1810
BseLI CCNNNNNNNGG 3 cut(s) 54, 120, 207
BseMI GCAATG 5 cut(s) 114, 135, 778, 972, 1676
BseMII CTCAG 1 cut(s) 942
BseNI ACTGG 5 cut(s) 156, 313, 855, 997, 1491
BseSI GKGCMC 1 cut(s) 1378
BseXI GCAGC 5 cut(s) 56, 198, 666, 949, 1356
BsgI GTGCAG 1 cut(s) 1542
Bsh1236I CGCG 4 cut(s) 473, 475, 647, 1223
BshFI GGCC 2 cut(s) 211, 607
BsiHKAI GWGCWC 3 cut(s) 631, 713, 1378
BsiSI CCGG 6 cut(s) 208, 252, 326, 456, 604, 795
BslI CCNNNNNNNGG 3 cut(s) 54, 120, 207
BsmAI GTCTC 3 cut(s) 102, 913, 1619
BsmI GAATGC 3 cut(s) 643, 829, 1181
BsnI GGCC 2 cut(s) 211, 607
Bsp1286I GDGCHC 4 cut(s) 631, 713, 1378, 1410
Bsp13I TCCGGA 1 cut(s) 455
Bsp143I GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
Bsp1720I GCTNAGC 1 cut(s) 239
BspACI CCGC 9 cut(s) 79, 138, 184, 471, 647, 719, 776, 1065, 1155
BspANI GGCC 2 cut(s) 211, 607
BspCNI CTCAG 1 cut(s) 941
BspEI TCCGGA 1 cut(s) 455
BspFNI CGCG 4 cut(s) 473, 475, 647, 1223
BspLI GGNNCC 4 cut(s) 277, 369, 1084, 1171
BspPI GGATC 1 cut(s) 1787
BspQI GCTCTTC 1 cut(s) 718
BsrDI GCAATG 5 cut(s) 114, 135, 778, 972, 1676
BsrFI RCCGGY 3 cut(s) 251, 325, 603
BsrI ACTGG 5 cut(s) 156, 313, 855, 997, 1491
BssAI RCCGGY 3 cut(s) 251, 325, 603
BssECI CCNNGG 1 cut(s) 766
BssMI GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
BssNI GRCGYC 2 cut(s) 32, 468
BssSI CACGAG 1 cut(s) 1528
Bst2BI CACGAG 1 cut(s) 1528
Bst2UI CCWGG 2 cut(s) 767, 1731
Bst4CI ACNGT 5 cut(s) 87, 301, 462, 1658, 1827
Bst6I CTCTTC 5 cut(s) 183, 390, 718, 1450, 1691
BstACI GRCGYC 2 cut(s) 32, 468
BstAPI GCANNNNNTGC 2 cut(s) 50, 1556
BstC8I GCNNGC 8 cut(s) 79, 253, 605, 643, 677, 684, 1342, 1435
BstDEI CTNAG 7 cut(s) 239, 407, 928, 1048, 1468, 1479, 1518
BstEII GGTNACC 1 cut(s) 308
BstENI CCTNNNNNAGG 1 cut(s) 52
BstF5I GGATG 4 cut(s) 1067, 1173, 1739, 1810
BstFNI CGCG 4 cut(s) 473, 475, 647, 1223
BstH2I RGCGCY 1 cut(s) 246
BstHHI GCGC 5 cut(s) 245, 257, 340, 475, 647
BstKTI GATC 7 cut(s) 24, 217, 613, 927, 1524, 1711, 1795
BstMAI GTCTC 3 cut(s) 102, 913, 1619
BstMBI GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
BstMWI GCNNNNNNNGC 4 cut(s) 50, 125, 1556, 1775
BstNI CCWGG 2 cut(s) 767, 1731
BstNSI RCATGY 7 cut(s) 261, 679, 686, 1041, 1144, 1437, 1554
BstPI GGTNACC 1 cut(s) 308
BstSCI CCNGG 3 cut(s) 206, 765, 1729
BstSFI CTRYAG 1 cut(s) 1823
BstSLI GKGCMC 1 cut(s) 1378
BstUI CGCG 4 cut(s) 473, 475, 647, 1223
BstV1I GCAGC 5 cut(s) 56, 198, 666, 949, 1356
BstXI CCANNNNNNTGG 1 cut(s) 615
BsuRI GGCC 2 cut(s) 211, 607
BtgZI GCGATG 2 cut(s) 842, 1238
BtrI CACGTC 2 cut(s) 950, 1810
BtsCI GGATG 4 cut(s) 1067, 1173, 1739, 1810
BtsI GCAGTG 2 cut(s) 228, 382
BtsIMutI CAGTG 5 cut(s) 228, 297, 382, 620, 631
Cac8I GCNNGC 8 cut(s) 79, 253, 605, 643, 677, 684, 1342, 1435
CfoI GCGC 5 cut(s) 245, 257, 340, 475, 647
Cfr10I RCCGGY 3 cut(s) 251, 325, 603
Cfr13I GGNCC 2 cut(s) 210, 1170
CseI GACGC 2 cut(s) 464, 476
Csp6I GTAC 2 cut(s) 1654, 1828
CviQI GTAC 2 cut(s) 1654, 1828
DdeI CTNAG 7 cut(s) 239, 407, 928, 1048, 1468, 1479, 1518
DpnI GATC 7 cut(s) 23, 216, 612, 926, 1523, 1710, 1794
DpnII GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
DraI TTTAAA 1 cut(s) 1164
DraIII CACNNNGTG 1 cut(s) 875
EaeI YGGCCR 1 cut(s) 605
Eam1104I CTCTTC 5 cut(s) 183, 390, 718, 1450, 1691
EarI CTCTTC 5 cut(s) 183, 390, 718, 1450, 1691
Ecl136II GAGCTC 1 cut(s) 711
Eco24I GRGCYC 2 cut(s) 713, 1410
Eco47I GGWCC 1 cut(s) 1170
Eco53kI GAGCTC 1 cut(s) 711
Eco57I CTGAAG 1 cut(s) 1494
Eco91I GGTNACC 1 cut(s) 308
EcoICRI GAGCTC 1 cut(s) 711
EcoNI CCTNNNNNAGG 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 308
EcoRI GAATTC 1 cut(s) 1786
EcoRII CCWGG 2 cut(s) 765, 1729
EcoT22I ATGCAT 3 cut(s) 1039, 1111, 1439
EcoT38I GRGCYC 2 cut(s) 713, 1410
FalI AAGNNNNNCTT 2 cut(s) 1527, 1559
FauI CCCGC 3 cut(s) 86, 1058, 1148
FauNDI CATATG 1 cut(s) 1111
FbaI TGATCA 1 cut(s) 21
Fnu4HI GCNGC 6 cut(s) 45, 187, 471, 680, 963, 1345
FokI GGATG 4 cut(s) 1074, 1160, 1746, 1817
FriOI GRGCYC 2 cut(s) 713, 1410
Fsp4HI GCNGC 6 cut(s) 45, 187, 471, 680, 963, 1345
FspBI CTAG 1 cut(s) 498
GlaI GCGC 5 cut(s) 244, 256, 339, 474, 646
GluI GCNGC 6 cut(s) 45, 187, 471, 680, 963, 1345
HaeII RGCGCY 1 cut(s) 246
HaeIII GGCC 2 cut(s) 211, 607
HapII CCGG 6 cut(s) 208, 252, 326, 456, 604, 795
HgaI GACGC 2 cut(s) 464, 476
HhaI GCGC 5 cut(s) 245, 257, 340, 475, 647
Hin1I GRCGYC 2 cut(s) 32, 468
Hin6I GCGC 5 cut(s) 243, 255, 338, 473, 645
HinP1I GCGC 5 cut(s) 243, 255, 338, 473, 645
HincII GTYRAC 2 cut(s) 331, 1138
HindII GTYRAC 2 cut(s) 331, 1138
HinfI GANTC 5 cut(s) 110, 195, 791, 996, 1849
HpaI GTTAAC 1 cut(s) 1138
HpaII CCGG 6 cut(s) 208, 252, 326, 456, 604, 795
HphI GGTGA 6 cut(s) 95, 127, 214, 736, 790, 1729
Hpy166II GTNNAC 5 cut(s) 293, 331, 618, 1138, 1376
Hpy188I TCNGA 1 cut(s) 1792
Hpy188III TCNNGA 4 cut(s) 456, 1353, 1415, 1846
Hpy8I GTNNAC 5 cut(s) 293, 331, 618, 1138, 1376
Hpy99I CGWCG 3 cut(s) 34, 37, 95
HpyAV CCTTC 6 cut(s) 235, 275, 495, 775, 1040, 1669
HpyCH4III ACNGT 5 cut(s) 87, 301, 462, 1658, 1827
HpyCH4IV ACGT 3 cut(s) 32, 949, 1809
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 125, 1556, 1775
HpyF3I CTNAG 7 cut(s) 239, 407, 928, 1048, 1468, 1479, 1518
HpySE526I ACGT 3 cut(s) 32, 949, 1809
Hsp92I GRCGYC 2 cut(s) 32, 468
HspAI GCGC 5 cut(s) 243, 255, 338, 473, 645
Kpn2I TCCGGA 1 cut(s) 455
KroI GCCGGC 2 cut(s) 251, 603
KroNI GCCGGC 2 cut(s) 253, 605
Ksp22I TGATCA 1 cut(s) 21
KspAI GTTAAC 1 cut(s) 1138
Kzo9I GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
LguI GCTCTTC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 367, 708, 1547
Lsp1109I GCAGC 5 cut(s) 56, 198, 666, 949, 1356
LweI GCATC 1 cut(s) 1052
MaeI CTAG 1 cut(s) 498
MaeII ACGT 3 cut(s) 32, 949, 1809
MaeIII GTNAC 6 cut(s) 62, 260, 308, 418, 1315, 1463
MalI GATC 7 cut(s) 23, 216, 612, 926, 1523, 1710, 1794
MboI GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
MhlI GDGCHC 4 cut(s) 631, 713, 1378, 1410
MlyI GAGTC 3 cut(s) 104, 800, 990
MmeI TCCRAC 3 cut(s) 225, 686, 1721
MnlI CCTC 5 cut(s) 111, 547, 643, 715, 1451
Mph1103I ATGCAT 3 cut(s) 1039, 1111, 1439
MroI TCCGGA 1 cut(s) 455
MroNI GCCGGC 2 cut(s) 251, 603
MroXI GAANNNNTTC 2 cut(s) 870, 1074
MseI TTAA 4 cut(s) 696, 1137, 1163, 1869
MslI CAYNNNNRTG 1 cut(s) 1110
MspI CCGG 6 cut(s) 208, 252, 326, 456, 604, 795
MspR9I CCNGG 3 cut(s) 208, 767, 1731
Mva1269I GAATGC 3 cut(s) 643, 829, 1181
MvaI CCWGG 2 cut(s) 767, 1731
MvnI CGCG 4 cut(s) 473, 475, 647, 1223
MwoI GCNNNNNNNGC 4 cut(s) 50, 125, 1556, 1775
NaeI GCCGGC 2 cut(s) 253, 605
NciI CCSGG 1 cut(s) 208
NdeI CATATG 1 cut(s) 1111
NdeII GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
NgoMIV GCCGGC 2 cut(s) 251, 603
NlaIV GGNNCC 4 cut(s) 277, 369, 1084, 1171
NmuCI GTSAC 1 cut(s) 62
NsiI ATGCAT 3 cut(s) 1039, 1111, 1439
NspI RCATGY 7 cut(s) 261, 679, 686, 1041, 1144, 1437, 1554
PaeI GCATGC 3 cut(s) 679, 686, 1437
PciI ACATGT 1 cut(s) 1140
PciSI GCTCTTC 1 cut(s) 718
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 3 cut(s) 643, 829, 1181
PdiI GCCGGC 2 cut(s) 253, 605
PdmI GAANNNNTTC 2 cut(s) 870, 1074
PfeI GAWTC 2 cut(s) 195, 1849
PflMI CCANNNNNTGG 1 cut(s) 120
PkrI GCNGC 6 cut(s) 46, 188, 472, 681, 964, 1346
PleI GAGTC 3 cut(s) 104, 799, 990
PpsI GAGTC 3 cut(s) 104, 799, 990
PscI ACATGT 1 cut(s) 1140
PshBI ATTAAT 1 cut(s) 1869
Psp124BI GAGCTC 1 cut(s) 713
Psp6I CCWGG 2 cut(s) 765, 1729
PspEI GGTNACC 1 cut(s) 308
PspGI CCWGG 2 cut(s) 765, 1729
PspN4I GGNNCC 4 cut(s) 277, 369, 1084, 1171
PspPI GGNCC 2 cut(s) 210, 1170
RsaI GTAC 2 cut(s) 1655, 1829
RsaNI GTAC 2 cut(s) 1654, 1828
RseI CAYNNNNRTG 1 cut(s) 1110
SacI GAGCTC 1 cut(s) 713
SapI GCTCTTC 1 cut(s) 718
SaqAI TTAA 4 cut(s) 696, 1137, 1163, 1869
SatI GCNGC 6 cut(s) 45, 187, 471, 680, 963, 1345
Sau3AI GATC 7 cut(s) 21, 214, 610, 924, 1521, 1708, 1792
Sau96I GGNCC 2 cut(s) 210, 1170
SchI GAGTC 3 cut(s) 104, 800, 990
ScrFI CCNGG 3 cut(s) 208, 767, 1731
SduI GDGCHC 4 cut(s) 631, 713, 1378, 1410
SfaNI GCATC 1 cut(s) 1052
SfcI CTRYAG 1 cut(s) 1823
SinI GGWCC 1 cut(s) 1170
SmiMI CAYNNNNRTG 1 cut(s) 1110
SphI GCATGC 3 cut(s) 679, 686, 1437
SsiI CCGC 9 cut(s) 79, 138, 184, 471, 647, 719, 776, 1065, 1155
SspI AATATT 2 cut(s) 904, 1586
SspMI CTAG 1 cut(s) 498
SstI GAGCTC 1 cut(s) 713
StyD4I CCNGG 3 cut(s) 206, 765, 1729
TaaI ACNGT 5 cut(s) 87, 301, 462, 1658, 1827
TaiI ACGT 3 cut(s) 35, 952, 1812
TaqI TCGA 5 cut(s) 35, 90, 268, 999, 1260
TatI WGTACW 2 cut(s) 1653, 1827
TauI GCSGC 1 cut(s) 473
TfiI GAWTC 2 cut(s) 195, 1849
Tru1I TTAA 4 cut(s) 696, 1137, 1163, 1869
Tru9I TTAA 4 cut(s) 696, 1137, 1163, 1869
TscAI CASTG 5 cut(s) 235, 304, 382, 620, 631
TseFI GTSAC 1 cut(s) 62
TseI GCWGC 5 cut(s) 44, 186, 679, 962, 1344
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 8 cut(s) 429, 602, 650, 679, 860, 879, 1022, 1067
TspGWI ACGGA 2 cut(s) 1166, 1175
TspRI CASTG 5 cut(s) 235, 304, 382, 620, 631
Van91I CCANNNNNTGG 1 cut(s) 120
VneI GTGCAC 1 cut(s) 1374
VpaK11BI GGWCC 1 cut(s) 1170
VspI ATTAAT 1 cut(s) 1869
XagI CCTNNNNNAGG 1 cut(s) 52
XapI RAATTY 3 cut(s) 659, 1648, 1786
XceI RCATGY 7 cut(s) 261, 679, 686, 1041, 1144, 1437, 1554
XmnI GAANNNNTTC 2 cut(s) 870, 1074
XspI CTAG 1 cut(s) 498
ZraI GACGTC 1 cut(s) 33
Zsp2I ATGCAT 3 cut(s) 1039, 1111, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.