Rorug02G0320800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002473
Physical Location & Seq
Forward (+)
39241427 .. 39244078
2652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0320800.1

Sequence Viewer

Length: 2478 bp
ATGGCTGGAATACTAGTTGACGTTCTGTTAGAGCGTTTGGCTACGCTCGCCCTTGACAAGGTCGAACGCGAGCTGAAGCTGGTGAGAGGGGTTAAGCAAGAAATCAAAAATCTCACCAAGAAACTCAAAGCTATTCGAGCTGTACTGGAGGACGCAGAGCAGAGGCAAGTGATGGAAGCCAGCGTGAAAGATTGGCTGAATGAGCTAAATGATGTTTGTGACGACATGGATGACGTGCTGGATGAGTGGATCACTAGAGCTCTCATGCATCAATTGGAGAAACAAGAAAAACAAGGTGCAAATGCTCTTGCTACTACTAAGAAGAAGGTATGCTTTCCCTTTCCTTCCTCTTGCTTTCGCTTCGGCCAAGTCAATCAGCTATTTCGTCGTCACGAAATTGCTGCGAAGATAAAAGAGCTAAATGAAAGTTTAGATTTGATTGATCAAAACAAACAAAGTTTTGGCTTTCATCAAAACACCACTAGGGTCCCCGAACTACCTCAACGACAAAAAACTACTTCTCTTCCCAATATTAAAACATTTGGTCGAGATAAGGAGAAAAACCTCATAGTTAGCAAGTTGATAAGTGAGAGTAGTCAAGAAAAGGAAGTTCCTCTTATCATCCCTATTGTAGGGATGGGGGGAATGGGGAAAACAACTCTTGCTCAACTTGTTTATAATGATGAAAATGTCAAATCTCATTTTGACAAGAGAATATGGGTCTGTGTCTCGGACCCTTTTGAAGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATAGATAAATTGATTGAGGGTAAAAAGTTTCTCCTAGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACGTAATGGTGGTATAGGAAGTAGGATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAACAACTCAATTGATCCATTTGAAGGAGTTGGGTGAAGCATTTTGTTTGTCATTGTTCTACTACAGTGCAGACATGGATGAGAGTAGTGTGTCCACCGAGTTTAAAAATATTGGATCAGAGATTGTGAAAAGGTGCAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTCATGCGTAATAAGAAAAAGATTCATGAATGGCAAGCTGTTTTAAAGAGTAAGACATGGGAATTGAAAGAGATTCAACAAGATGTTTTTCGACCACTACTATTAAGTTATCATGATTTGAGTCCAGCAACCAAACGTTGTCTTTTGTATTGTGTTACATTTCCAAAAGATTATGTGTACAATAGGAATTGTTTGATTGAGTTGTGGATGTCGCAAGATTATTTGAATGTCAAAGAAATACAATTGAAATGCCTTAGAACATTAGACTTGCGTGGTTGGCGGGGGAAGGGTTGTCTCAAAGAAATTCCCGAGACGATAGGTGGATTGATACATTTGAGGTATCTCGATTTATCCGAGAATTTGGGGTTGGAGGAATTACCCAGTGCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGACTTGTTCGTTGCGTGAATCTGAAAAAAGTAGATGTCCGAAGGCTGATTAACTTGAGGCATCTTTATGTTGAAGGCTGTTGGGAGCTAAAGTTAATTGAAGAGATTGAGAAATTAACAGATCTGCAAAGGCTAGATCAGTTTGTTGTCCCAATTATCGGTGGTGATGAAGGAAACAAGTTGGAACATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGCTATTCGTATTCTGGGAAATCCAAATATGGCGGAGAATGCAGCAGCAATCATGGTGAATAAGGCTCACCTCCTGGAATTGAGACTAGAGTTTTACTCGGTTGATGAAGGAAAGCATGGAGAAATTATGAATGGCTTAGAGCCGCATCCAGATTTGGAATCTTTATACATCTGGTTTTATAAAGGTGGCGCCTTCTCCCATTGGTTGTCGTATTTACACAGCTTGAGAATGCTCATCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAACTGGCGTCCCTTGAATCATTGCATATTGTGCAACTCCATGGAGTCTCAAAGGTAGGAGTTGAGTTTTTGGGAATAGATGATGGGCAAACCTCCTCATCGTCTTCCATTTTCATATCATTCCCCAAGCTTAAACAACTTGGCTTCTACAACATGGGGCCATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCATGCCTCTCTCAATTGACAATTGGGTACTGCTACAAGCTAAAAGCACTGCCGGACTTCCTGTGGGAGACACCACTACAGAAATTGCACATCTTTAGATCTCCAATTCTCCAAGACCTTTACAGACAAGGAATAGGTGAGAAGTGGGCCAAGATCCCAACCATCGTGATAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

825

Amino Acids

94.23

Weight (kDa)

6.37

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 1.5e-22 Rx N-terminal domain
NB-ARC PF00931 187 - 356 4.9e-36 NB-ARC domain
LRR_14 PF23598 473 - 774 1.8e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 591 - 709 1.1e-26 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 678, 1992
Acc36I ACCTGC 1 cut(s) 1587
AccB1I GGYRCC 1 cut(s) 2000
AccII CGCG 1 cut(s) 69
AciI CCGC 3 cut(s) 1453, 1844, 1955
AclI AACGTT 1 cut(s) 1309
AclWI GGATC 4 cut(s) 257, 1009, 1123, 2446
AcoI YGGCCR 1 cut(s) 364
AcsI RAATTY 2 cut(s) 1476, 1531
AcuI CTGAAG 1 cut(s) 95
AcyI GRCGYC 2 cut(s) 2001, 2099
AfaI GTAC 3 cut(s) 144, 1352, 2327
AfiI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 1748, 2087
AhlI ACTAGT 1 cut(s) 13
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 1560, 1884
AjuI GAANNNNNNNTTGG 2 cut(s) 1523, 1555
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 7 cut(s) 733, 1472, 1478, 1888, 2048, 2143, 2360
AlwI GGATC 4 cut(s) 257, 1009, 1123, 2446
Ama87I CYCGRG 1 cut(s) 1481
AoxI GGCC 3 cut(s) 364, 2249, 2445
ApeKI GCWGC 5 cut(s) 401, 1154, 1566, 1853, 1856
ApoI RAATTY 2 cut(s) 1476, 1531
AspLEI GCGC 1 cut(s) 2003
AspS9I GGNCC 4 cut(s) 487, 733, 2249, 2445
AsuHPI GGTGA 8 cut(s) 94, 106, 973, 1046, 1766, 1871, 1879, 2447
AvaI CYCGRG 1 cut(s) 1481
AvaII GGWCC 2 cut(s) 487, 733
BaeGI GKGCMC 1 cut(s) 1561
BanI GGYRCC 1 cut(s) 2000
BanII GRGCYC 2 cut(s) 262, 893
BbsI GAAGAC 1 cut(s) 2187
Bbv12I GWGCWC 1 cut(s) 262
BbvI GCAGC 5 cut(s) 388, 1141, 1578, 1865, 1868
BccI CCATC 4 cut(s) 166, 631, 2168, 2468
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciT130I CCWGG 2 cut(s) 1562, 1886
BclI TGATCA 3 cut(s) 442, 901, 918
BcoDI GTCTC 7 cut(s) 733, 1472, 1478, 1888, 2048, 2143, 2360
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1724, 1898
BfmI CTRYAG 2 cut(s) 1063, 2375
BfoI RGCGCY 1 cut(s) 2004
BfuAI ACCTGC 1 cut(s) 1587
BglII AGATCT 2 cut(s) 1711, 2396
BisI GCNGC 6 cut(s) 402, 1155, 1567, 1854, 1857, 1955
BlsI GCNGC 6 cut(s) 403, 1156, 1568, 1855, 1858, 1956
Bme1390I CCNGG 2 cut(s) 1562, 1886
Bme18I GGWCC 2 cut(s) 487, 733
BmeT110I CYCGRG 1 cut(s) 1481
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 4 cut(s) 487, 733, 2249, 2445
BmiI GGNNCC 6 cut(s) 488, 489, 735, 890, 2002, 2250
BmrFI CCNGG 2 cut(s) 1562, 1886
BmrI ACTGGG 1 cut(s) 1548
BmsI GCATC 3 cut(s) 277, 1660, 1966
BmuI ACTGGG 1 cut(s) 1548
BpiI GAAGAC 1 cut(s) 2187
BplI GAGNNNNNCTC 2 cut(s) 1892, 1924
BpmI CTGGAG 1 cut(s) 167
BpuEI CTTGAG 4 cut(s) 744, 1666, 2056, 2072
BsaAI YACGTR 1 cut(s) 932
BsaHI GRCGYC 2 cut(s) 2001, 2099
BsaJI CCNNGG 4 cut(s) 1560, 1561, 2131, 2252
BsaXI ACNNNNNCTCC 2 cut(s) 1667, 1697
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 1748, 2087
Bse1I ACTGG 3 cut(s) 150, 1554, 2100
Bse3DI GCAATG 3 cut(s) 836, 1144, 2111
BseBI CCWGG 2 cut(s) 1562, 1886
BseDI CCNNGG 4 cut(s) 1560, 1561, 2131, 2252
BseGI GGATG 8 cut(s) 235, 247, 621, 642, 1084, 1386, 1957, 2046
BseLI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 1748, 2087
BseMI GCAATG 3 cut(s) 836, 1144, 2111
BseNI ACTGG 3 cut(s) 150, 1554, 2100
BseRI GAGGAG 2 cut(s) 992, 2176
BseSI GKGCMC 1 cut(s) 1561
BseXI GCAGC 5 cut(s) 388, 1141, 1578, 1865, 1868
BsgI GTGCAG 1 cut(s) 1089
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 366, 2251, 2447
BshNI GGYRCC 1 cut(s) 2000
BsiHKAI GWGCWC 1 cut(s) 262
BsiHKCI CYCGRG 1 cut(s) 1481
BsiSI CCGG 1 cut(s) 2351
BslFI GGGAC 3 cut(s) 473, 1724, 2086
BslI CCNNNNNNNGG 5 cut(s) 58, 632, 1024, 1748, 2087
BsmAI GTCTC 7 cut(s) 733, 1472, 1478, 1888, 2048, 2143, 2360
BsmBI CGTCTC 1 cut(s) 1478
BsmFI GGGAC 3 cut(s) 473, 1724, 2086
BsmI GAATGC 2 cut(s) 1855, 2046
BsnI GGCC 3 cut(s) 366, 2251, 2447
BsoBI CYCGRG 1 cut(s) 1481
Bsp1286I GDGCHC 3 cut(s) 262, 893, 1561
Bsp1407I TGTACA 1 cut(s) 1350
Bsp19I CCATGG 2 cut(s) 2131, 2252
BspACI CCGC 3 cut(s) 1453, 1844, 1955
BspANI GGCC 3 cut(s) 366, 2251, 2447
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 2 cut(s) 1198, 1285
BspLI GGNNCC 6 cut(s) 488, 489, 735, 890, 2002, 2250
BspMI ACCTGC 1 cut(s) 1587
BspPI GGATC 4 cut(s) 257, 1009, 1123, 2446
BspT107I GGYRCC 1 cut(s) 2000
BsrDI GCAATG 3 cut(s) 836, 1144, 2111
BsrGI TGTACA 1 cut(s) 1350
BsrI ACTGG 3 cut(s) 150, 1554, 2100
BssECI CCNNGG 4 cut(s) 1560, 1561, 2131, 2252
BssNI GRCGYC 2 cut(s) 2001, 2099
BssT1I CCWWGG 2 cut(s) 2131, 2252
Bst2UI CCWGG 2 cut(s) 1562, 1886
Bst4CI ACNGT 1 cut(s) 1067
Bst6I CTCTTC 4 cut(s) 528, 738, 1686, 2253
BstACI GRCGYC 2 cut(s) 2001, 2099
BstAPI GCANNNNNTGC 2 cut(s) 1588, 2122
BstAUI TGTACA 1 cut(s) 1350
BstBAI YACGTR 1 cut(s) 932
BstC8I GCNNGC 4 cut(s) 48, 71, 181, 1209
BstDEI CTNAG 3 cut(s) 318, 1427, 1948
BstDSI CCRYGG 2 cut(s) 2131, 2252
BstEII GGTNACC 1 cut(s) 961
BstENI CCTNNNNNAGG 3 cut(s) 56, 630, 2085
BstF5I GGATG 8 cut(s) 235, 247, 621, 642, 1084, 1386, 1957, 2046
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 2004
BstHHI GCGC 1 cut(s) 2003
BstMAI GTCTC 7 cut(s) 733, 1472, 1478, 1888, 2048, 2143, 2360
BstMWI GCNNNNNNNGC 7 cut(s) 47, 137, 202, 1450, 1588, 1850, 2122
BstNI CCWGG 2 cut(s) 1562, 1886
BstPI GGTNACC 1 cut(s) 961
BstSCI CCNGG 2 cut(s) 1560, 1884
BstSFI CTRYAG 2 cut(s) 1063, 2375
BstSLI GKGCMC 1 cut(s) 1561
BstSNI TACGTA 1 cut(s) 932
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 5 cut(s) 388, 1141, 1578, 1865, 1868
BstV2I GAAGAC 1 cut(s) 2187
BstX2I RGATCY 3 cut(s) 1711, 2396, 2451
BstXI CCANNNNNNTGG 1 cut(s) 1561
BstYI RGATCY 3 cut(s) 1711, 2396, 2451
BsuRI GGCC 3 cut(s) 366, 2251, 2447
BtgI CCRYGG 2 cut(s) 2131, 2252
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 8 cut(s) 235, 247, 621, 642, 1084, 1386, 1957, 2046
BtsI GCAGTG 1 cut(s) 2345
BtsIMutI CAGTG 3 cut(s) 1072, 1561, 2345
BveI ACCTGC 1 cut(s) 1587
Cac8I GCNNGC 4 cut(s) 48, 71, 181, 1209
CciI TCATGA 2 cut(s) 1198, 1285
CfoI GCGC 1 cut(s) 2003
Cfr13I GGNCC 4 cut(s) 487, 733, 2249, 2445
CseI GACGC 3 cut(s) 161, 835, 2088
Csp6I GTAC 3 cut(s) 143, 1351, 2326
CviQI GTAC 3 cut(s) 143, 1351, 2326
DdeI CTNAG 3 cut(s) 318, 1427, 1948
DinI GGCGCC 1 cut(s) 2002
DraI TTTAAA 2 cut(s) 1105, 1218
EaeI YGGCCR 1 cut(s) 364
Eam1104I CTCTTC 4 cut(s) 528, 738, 1686, 2253
EarI CTCTTC 4 cut(s) 528, 738, 1686, 2253
EciI GGCGGA 1 cut(s) 1859
Ecl136II GAGCTC 1 cut(s) 260
Eco105I TACGTA 1 cut(s) 932
Eco130I CCWWGG 2 cut(s) 2131, 2252
Eco24I GRGCYC 2 cut(s) 262, 893
Eco47I GGWCC 2 cut(s) 487, 733
Eco53kI GAGCTC 1 cut(s) 260
Eco57I CTGAAG 1 cut(s) 95
Eco88I CYCGRG 1 cut(s) 1481
Eco91I GGTNACC 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 260
EcoNI CCTNNNNNAGG 3 cut(s) 56, 630, 2085
EcoO109I RGGNCCY 1 cut(s) 487
EcoO65I GGTNACC 1 cut(s) 961
EcoRII CCWGG 2 cut(s) 1560, 1884
EcoT14I CCWWGG 2 cut(s) 2131, 2252
EcoT22I ATGCAT 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 262, 893
EgeI GGCGCC 1 cut(s) 2002
EheI GGCGCC 1 cut(s) 2002
ErhI CCWWGG 2 cut(s) 2131, 2252
Esp3I CGTCTC 1 cut(s) 1478
FalI AAGNNNNNCTT 6 cut(s) 317, 349, 600, 632, 1794, 1826
FaqI GGGAC 3 cut(s) 473, 1724, 2086
FauI CCCGC 1 cut(s) 1446
FbaI TGATCA 3 cut(s) 442, 901, 918
Fnu4HI GCNGC 6 cut(s) 402, 1155, 1567, 1854, 1857, 1955
FokI GGATG 8 cut(s) 242, 254, 608, 649, 1091, 1393, 1944, 2033
FriOI GRGCYC 2 cut(s) 262, 893
Fsp4HI GCNGC 6 cut(s) 402, 1155, 1567, 1854, 1857, 1955
FspBI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1724, 1898
GlaI GCGC 1 cut(s) 2002
GluI GCNGC 6 cut(s) 402, 1155, 1567, 1854, 1857, 1955
GsuI CTGGAG 1 cut(s) 167
HaeII RGCGCY 1 cut(s) 2004
HaeIII GGCC 3 cut(s) 366, 2251, 2447
HapII CCGG 1 cut(s) 2351
HgaI GACGC 3 cut(s) 161, 835, 2088
HhaI GCGC 1 cut(s) 2003
Hin1I GRCGYC 2 cut(s) 2001, 2099
Hin6I GCGC 1 cut(s) 2001
HinP1I GCGC 1 cut(s) 2001
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 2219
HinfI GANTC 8 cut(s) 1195, 1246, 1294, 1609, 1807, 1970, 2108, 2136
HpaII CCGG 1 cut(s) 2351
HphI GGTGA 8 cut(s) 94, 106, 973, 1046, 1766, 1871, 1879, 2447
Hpy166II GTNNAC 3 cut(s) 19, 1095, 1351
Hpy188I TCNGA 7 cut(s) 733, 901, 1120, 1528, 1614, 1631, 1782
Hpy8I GTNNAC 3 cut(s) 19, 1095, 1351
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 9 cut(s) 319, 354, 1018, 1453, 1626, 1658, 1754, 1913, 2014
HpyCH4III ACNGT 1 cut(s) 1067
HpyCH4IV ACGT 4 cut(s) 21, 234, 931, 1309
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 137, 202, 1450, 1588, 1850, 2122
HpyF3I CTNAG 3 cut(s) 318, 1427, 1948
HpySE526I ACGT 4 cut(s) 21, 234, 931, 1309
Hsp92I GRCGYC 2 cut(s) 2001, 2099
HspAI GCGC 1 cut(s) 2001
KasI GGCGCC 1 cut(s) 2000
KflI GGGWCCC 1 cut(s) 487
Ksp22I TGATCA 3 cut(s) 442, 901, 918
LmnI GCTCC 2 cut(s) 888, 1675
Lsp1109I GCAGC 5 cut(s) 388, 1141, 1578, 1865, 1868
LweI GCATC 3 cut(s) 277, 1660, 1966
MaeI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1724, 1898
MaeII ACGT 4 cut(s) 21, 234, 931, 1309
MaeIII GTNAC 5 cut(s) 218, 389, 961, 985, 1327
MboII GAAGA 9 cut(s) 334, 418, 515, 755, 785, 923, 1703, 2187, 2270
MfeI CAATTG 5 cut(s) 272, 1010, 1415, 2312, 2319
MflI RGATCY 3 cut(s) 1711, 2396, 2451
MhlI GDGCHC 3 cut(s) 262, 893, 1561
Mly113I GGCGCC 1 cut(s) 2001
MlyI GAGTC 3 cut(s) 1303, 1816, 2145
MmeI TCCRAC 2 cut(s) 1521, 1752
Mph1103I ATGCAT 1 cut(s) 270
MslI CAYNNNNRTG 1 cut(s) 1656
MspI CCGG 1 cut(s) 2351
MspR9I CCNGG 2 cut(s) 1562, 1886
MunI CAATTG 5 cut(s) 272, 1010, 1415, 2312, 2319
Mva1269I GAATGC 2 cut(s) 1855, 2046
MvaI CCWGG 2 cut(s) 1562, 1886
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 7 cut(s) 47, 137, 202, 1450, 1588, 1850, 2122
NarI GGCGCC 1 cut(s) 2001
NcoI CCATGG 2 cut(s) 2131, 2252
NlaIV GGNNCC 6 cut(s) 488, 489, 735, 890, 2002, 2250
NmuCI GTSAC 3 cut(s) 218, 389, 961
NsiI ATGCAT 1 cut(s) 270
PagI TCATGA 2 cut(s) 1198, 1285
PasI CCCWGGG 1 cut(s) 1561
PcsI WCGNNNNNNNCGW 1 cut(s) 1524
PctI GAATGC 2 cut(s) 1855, 2046
PfeI GAWTC 5 cut(s) 1195, 1246, 1609, 1970, 2108
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 1884
PkrI GCNGC 6 cut(s) 403, 1156, 1568, 1855, 1858, 1956
PleI GAGTC 3 cut(s) 1302, 1815, 2144
PluTI GGCGCC 1 cut(s) 2004
PpsI GAGTC 3 cut(s) 1302, 1815, 2144
Ppu21I YACGTR 1 cut(s) 932
PpuMI RGGWCCY 1 cut(s) 487
PsiI TTATAA 2 cut(s) 678, 1992
Psp124BI GAGCTC 1 cut(s) 262
Psp1406I AACGTT 1 cut(s) 1309
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 2 cut(s) 1560, 1884
PspEI GGTNACC 1 cut(s) 961
PspGI CCWGG 2 cut(s) 1560, 1884
PspN4I GGNNCC 6 cut(s) 488, 489, 735, 890, 2002, 2250
PspPI GGNCC 4 cut(s) 487, 733, 2249, 2445
PspPPI RGGWCCY 1 cut(s) 487
PsuI RGATCY 3 cut(s) 1711, 2396, 2451
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 3 cut(s) 144, 1352, 2327
RsaNI GTAC 3 cut(s) 143, 1351, 2326
RseI CAYNNNNRTG 1 cut(s) 1656
SacI GAGCTC 1 cut(s) 262
SatI GCNGC 6 cut(s) 402, 1155, 1567, 1854, 1857, 1955
Sau96I GGNCC 4 cut(s) 487, 733, 2249, 2445
SchI GAGTC 3 cut(s) 1303, 1816, 2145
ScrFI CCNGG 2 cut(s) 1562, 1886
SduI GDGCHC 3 cut(s) 262, 893, 1561
SfaNI GCATC 3 cut(s) 277, 1660, 1966
SfcI CTRYAG 2 cut(s) 1063, 2375
SfoI GGCGCC 1 cut(s) 2002
SinI GGWCC 2 cut(s) 487, 733
SmiMI CAYNNNNRTG 1 cut(s) 1656
SmlI CTYRAG 4 cut(s) 759, 1645, 2035, 2051
SmoI CTYRAG 4 cut(s) 759, 1645, 2035, 2051
SnaBI TACGTA 1 cut(s) 932
SpeI ACTAGT 1 cut(s) 13
SsiI CCGC 3 cut(s) 1453, 1844, 1955
SspDI GGCGCC 1 cut(s) 2000
SspI AATATT 3 cut(s) 532, 1111, 2287
SspMI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1724, 1898
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 2 cut(s) 1560, 1884
StyI CCWWGG 2 cut(s) 2131, 2252
TaaI ACNGT 1 cut(s) 1067
TaiI ACGT 4 cut(s) 24, 237, 934, 1312
TaqI TCGA 5 cut(s) 63, 136, 547, 1264, 1518
TatI WGTACW 2 cut(s) 142, 1350
TauI GCSGC 1 cut(s) 1957
TfiI GAWTC 5 cut(s) 1195, 1246, 1609, 1970, 2108
TscAI CASTG 3 cut(s) 1072, 1561, 2352
TseFI GTSAC 3 cut(s) 218, 389, 961
TseI GCWGC 5 cut(s) 401, 1154, 1566, 1853, 1856
Tsp45I GTSAC 3 cut(s) 218, 389, 961
TspGWI ACGGA 1 cut(s) 2078
TspRI CASTG 3 cut(s) 1072, 1561, 2352
Tth111I GACNNNGTC 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 487, 733
XagI CCTNNNNNAGG 3 cut(s) 56, 630, 2085
XapI RAATTY 2 cut(s) 1476, 1531
XcmI CCANNNNNNNNNTGG 1 cut(s) 2259
XspI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1724, 1898
Zsp2I ATGCAT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.