Rorug02G0350000

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004732
Physical Location & Seq
Forward (+)
43975578 .. 43987211
11634 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0350000.1

Sequence Viewer

Length: 2892 bp
ATGGCTGAAGCACTTGTGTCCTTCCTTGTAGAGCAGTTGGGTTCCTTCACCTTCCGGCATGTGGAACAACATGTGAAACTTGTTGTGAATGTCAAAAACGAAGTAGCAACTCTTACCCTCAACCTCAAAACTATCCAAGCTGTGCTGGCGGATGCAGAGAGGAGGCAAGTGAAGGAAGACAGCGTGAGATGCTGGCTCAATGATCTGAAAGAAGTGTCGTTCGAGGTAGACGATGTGGTGGACGAGTGGAGCACTGAAATCTTGAAACAACAAATCGAGAACCAAGGTGACAATGCTATTGTACCTAAGAAGAAGGTATGTTTCTCTATTCCCTTCCGTTGTCTTTGTACTGGCCAAGTCACTCGGATAATTTCTCGTCATGACATTGCTGTGAGGATAAAAGAGTTGAATAAGAAGTTAGCTTCGATTCATGAGCGGCAAATTTTTTTTGAGTTTCTTAAAAAGGAAATAGAATTTGAGCAACCTGAACGATTGAAAAGTTTGTCAATTGTCGATGAATCTGGGACATTTGGTAGAGATCATGACAAGGACATACTAGTAAGCCAATTGGTGAGTGAAAATAGTCAAGAAAGGAGGGGGCCTCTTGTCATCTCTATTGTAGGTTTTGGGGGGATAGGAAAAACAACTCTTGCCCAACTAGCCTATAGTGATGATAAGGTAAAGGAATGTTTTCGTACAAGAATATGGGTTTGTGTCTCAGAACCATTTGTACAAATTGCAGTTGCCAAAGCCATCCTTGAGGGTCTTAATGCAAGTGTCCCAAATTCAAATGAGTTAGAAACTTTTGTTCGACATATATCTGACTCTATTGAGGGCAAGAAGTTCCTCCTTGTCCTGGACGATGTTTGGGACTCAAACCATAGAAAGTGGGAGCCCTTCTTGACAACATTACGGTGTGGTGGCTCAGGGAGTAGAATTTTGGTTACAACGCGAATAACGCATGTTGCTAGTACACTAGGAGCAACTACTGACCACACAATCCATTTGAAGGAGTTGGGTGAAGAAACTTGTCAGTCATTGTTCTATCACATTGCATTTTTTGATGGTGAAAGAAAGGAGTCTAAAAAGTTCAAAGATATTGGTAATGAAATCGTGAGAAGGTGCAAAGGCTTGCCTCTTGCTGCTAAGACTTTGGGTAGTCTAATGCGGTATAAGAAAACAGTGCAACAATGGGAAGATGTCTTGAATAGTAAGATATGGGAATTTGAGGAGGTTGAGCAACAGGTTTTCCAACCACTATTACTAAGTTACTATGATTTAGAACCACTTTCCAAACGTTGTCTTTTGTATTGTGCTACATTTCCTAAAGATCATAAGATTGTCAAGGATGAGTTGATTGAGTTGTGGATGTCACAAGATTATCTTAAAGTTAAAGGGGGAACCAAAGAAGATAAAATAGTTGGTCAAAGGTGTTTTGAGAACTTAGTATTGCGGTCTTTTTTTCAAGATTTTGAGAAAGATTACGAGGGGAACATTAAAAGTTGTAAAATGCACGATATTGTGCATGACTTTGTGCAATACCTGACCAAGGATGAATGCTTTAGTATGGTGGTCAAGGGTGCTAATGAGAGAATGGAGTTACCGGGGGATGAAGTCCGTCATTTGTCTTTAATGTTTGCACCCGAGGGTCCATTTCCTGTTTCTTCTCTCAACTGTAAGAGTTTGCGCACTCTCACAGCTTTTGAATCGAAACTTACTAGCATTGGCATTGAGTTGATTTCGCAATCAAAAAGCCTTAGGACTTTGAACTTGAGTAAAAACTCGATTGTAGAAGTTCCAAAGGAGATTGGTGGATTGATACATTTGAGATATCTAGACTTGTCTCAAAACCGTGAACTGAAGGAATTCCCCGACAGTTTATGTGATTTATACAATCTGCAAACCTTGCGACTTGTCGGGTGCAGTCAACTTGTCAAATTTCCCGATGAAGAGGCAATGAGAAAGCTAACCAAGTTAAAGCATCTTTATGTCGAGGGGTCCTGTCGTCTAAAATCAAAAGGGATAGGGAGGTTAACCGGTCTGCAAAAGCTAGATGTGTTTCATCTAAATGGTTATTGGGGTAAGAACAAAGAAGGGACGTTGAAGTTGCAAGATTTGAAAAACTTGAACCAACTTGAAGGGAGTCTTTGCATTGCATACTTGGAGTCTGTGGAAGATGCGAGTGAGGGTGTAGAGGCATGTTTGAGTGAGAAACATCTCCTTCATCTGAAACTGGATTTCTTATGTGACCAGGGATATTATAAGGGCTCGAGAGACGAAAGGACGGGCCAAAATGATAGAGAAATACTGAATGGGCTGCAACCACATGGAGATTTAGAATCATTGACCATCCGGAACTGCCAGCTGGTTACTTCTCTGTGTCCTGATTGGATCTTGTCTTTACATAATCTGACAAGTCTTGAGCTTGGGTGGTTCGGTAATTGTGAGCTGCTTTCGGGTCCATTTGGGAGATTGCCGTCGCTTGAATCACTTGAAATTGTGAGGATGGATAAAGTGAAAAAGGTGGGAGTGGAGTTATTGGGAATTGAAGAAAGAGAATTACAATCATCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCTTCTCTTATTTTATTCCCCAAATTGAAAAGCCTCCTGTTCTTTGAAATGGATGAGTGGGAAGAGTGGGAAGGAGTGGGAGGGGATTTTCAGAATAATATTACCATAATGCCCTCCCTATCTCGCTTGGCATTTTGGGGGTGCTTCAAACTTGGTACGCTGCCCGACTTCCTGCGCAAGACACCACTACAGAGTGTGGTCGTCAACTGGTGTCCAATTCTCAGAGATAGAGTCAGGGACAAAACAAGTGAGGAGTGGGCCAAGATTTCTCACGTCCCAGACATTCAATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000064 GO:0003333 GO:0003674 GO:0005215 GO:0005287 GO:0005289 GO:0005290 GO:0005292 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006082 GO:0006520 GO:0006560 GO:0006561 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006844 GO:0006855 GO:0006865 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0008324 GO:0008509 GO:0008514 GO:0008519 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009628 GO:0009987 GO:0015075 GO:0015101 GO:0015171 GO:0015174 GO:0015179 GO:0015181 GO:0015189 GO:0015227 GO:0015238 GO:0015318 GO:0015651 GO:0015695 GO:0015696 GO:0015697 GO:0015711 GO:0015802 GO:0015807 GO:0015809 GO:0015822 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0016053 GO:0018130 GO:0019752 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045117 GO:0046394 GO:0046483 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051181 GO:0051234 GO:0055085 GO:0071702 GO:0071704 GO:0071705 GO:0072488 GO:0089709 GO:0098655 GO:0098656 GO:1901360 GO:1901362 GO:1901474 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902022 GO:1902023 GO:1902475 GO:1902616 GO:1903352 GO:1903400 GO:1903401 GO:1903825 GO:1903826 GO:1905039 GO:1990542 GO:1990575 GO:1990822
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

963

Amino Acids

109.82

Weight (kDa)

6.0

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 6.2e-21 Rx N-terminal domain
NB-ARC PF00931 183 - 353 8e-32 NB-ARC domain
WHD_DRP PF23559 441 - 512 3.2e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 562 - 909 1.1e-23 Leucine-rich repeat region
LRR_8 PF13855 562 - 618 2.9e-07 Leucine rich repeat
LRR_8 PF13855 585 - 641 1.8e-08 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 703 - 836 1.1e-24 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2262
Acc16I TGCGCA 2 cut(s) 1688, 2774
AccBSI CCGCTC 1 cut(s) 436
AccI GTMKAC 1 cut(s) 228
AccII CGCG 1 cut(s) 952
AccIII TCCGGA 1 cut(s) 2352
AciI CCGC 4 cut(s) 149, 436, 1168, 1453
AclI AACGTT 1 cut(s) 1297
AclWI GGATC 1 cut(s) 2399
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 7 cut(s) 441, 473, 784, 936, 1223, 1865, 1937
AcuI CTGAAG 2 cut(s) 27, 1880
AfaI GTAC 6 cut(s) 303, 349, 697, 732, 973, 2755
AfiI CCNNNNNNNGG 4 cut(s) 61, 856, 1009, 1549
AflIII ACRYGT 1 cut(s) 70
AgeI ACCGGT 1 cut(s) 2036
AhlI ACTAGT 1 cut(s) 556
AjiI CACGTC 1 cut(s) 2872
AjnI CCWGG 2 cut(s) 855, 2250
AluBI AGCT 8 cut(s) 140, 422, 1700, 1966, 2050, 2365, 2425, 2449
AluI AGCT 8 cut(s) 140, 422, 1700, 1966, 2050, 2365, 2425, 2449
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 3 cut(s) 721, 1848, 2268
AlwI GGATC 1 cut(s) 2399
Ama87I CYCGRG 2 cut(s) 1643, 2269
Aor13HI TCCGGA 1 cut(s) 2352
AoxI GGCC 4 cut(s) 352, 599, 2287, 2856
ApeKI GCWGC 4 cut(s) 1142, 2317, 2449, 2758
ApoI RAATTY 7 cut(s) 441, 473, 784, 936, 1223, 1865, 1937
AsiGI ACCGGT 1 cut(s) 2036
Asp700I GAANNNNTTC 2 cut(s) 690, 1865
AspLEI GCGC 2 cut(s) 1689, 2775
AspS9I GGNCC 6 cut(s) 599, 1649, 1998, 2287, 2459, 2856
AsuC2I CCSGG 1 cut(s) 1605
AsuHPI GGTGA 5 cut(s) 40, 299, 583, 1031, 1079
AvaI CYCGRG 2 cut(s) 1643, 2269
AvaII GGWCC 3 cut(s) 1649, 1998, 2459
AxyI CCTNAGG 1 cut(s) 1757
BalI TGGCCA 1 cut(s) 354
BanII GRGCYC 2 cut(s) 897, 2270
BbsI GAAGAC 2 cut(s) 183, 2592
Bbv12I GWGCWC 1 cut(s) 254
BbvI GCAGC 4 cut(s) 1129, 2304, 2436, 2745
BccI CCATC 4 cut(s) 761, 1058, 2357, 2500
BceAI ACGGC 1 cut(s) 2461
BciT130I CCWGG 2 cut(s) 857, 2252
BcnI CCSGG 1 cut(s) 1605
BcoDI GTCTC 3 cut(s) 721, 1848, 2268
BcuI ACTAGT 1 cut(s) 556
BfaI CTAG 7 cut(s) 557, 659, 969, 977, 1719, 1835, 2051
BfmI CTRYAG 2 cut(s) 664, 2786
BisI GCNGC 5 cut(s) 437, 1143, 2318, 2450, 2759
BlsI GCNGC 5 cut(s) 438, 1144, 2319, 2451, 2760
Bme1390I CCNGG 3 cut(s) 857, 1605, 2252
Bme18I GGWCC 3 cut(s) 1649, 1998, 2459
BmeT110I CYCGRG 2 cut(s) 1643, 2269
BmgBI CACGTC 1 cut(s) 2872
BmgT120I GGNCC 6 cut(s) 599, 1649, 1998, 2287, 2459, 2856
BmiI GGNNCC 7 cut(s) 43, 600, 894, 1402, 1650, 1999, 2460
BmrFI CCNGG 3 cut(s) 857, 1605, 2252
BmsI GCATC 4 cut(s) 142, 179, 1990, 2167
BpiI GAAGAC 2 cut(s) 183, 2592
BplI GAGNNNNNCTC 2 cut(s) 586, 618
Bpu10I CCTNAGC 1 cut(s) 925
BpuEI CTTGAG 3 cut(s) 779, 1792, 2441
BpuMI CCSGG 1 cut(s) 1605
BsaJI CCNNGG 5 cut(s) 283, 1548, 1604, 1644, 2251
BsaWI WCCGGW 2 cut(s) 2036, 2352
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 856, 1009, 1549
Bse118I RCCGGY 1 cut(s) 2036
Bse1I ACTGG 3 cut(s) 355, 2238, 2810
Bse21I CCTNAGG 1 cut(s) 1757
Bse3DI GCAATG 4 cut(s) 384, 1050, 1962, 2151
BseAI TCCGGA 1 cut(s) 2352
BseBI CCWGG 2 cut(s) 857, 2252
BseDI CCNNGG 5 cut(s) 283, 1548, 1604, 1644, 2251
BseLI CCNNNNNNNGG 4 cut(s) 61, 856, 1009, 1549
BseMI GCAATG 4 cut(s) 384, 1050, 1962, 2151
BseMII CTCAG 3 cut(s) 732, 939, 2833
BseNI ACTGG 3 cut(s) 355, 2238, 2810
BseXI GCAGC 4 cut(s) 1129, 2304, 2436, 2745
BsgI GTGCAG 1 cut(s) 1942
Bsh1236I CGCG 1 cut(s) 952
BshFI GGCC 4 cut(s) 354, 601, 2289, 2858
BshTI ACCGGT 1 cut(s) 2036
BsiHKAI GWGCWC 1 cut(s) 254
BsiHKCI CYCGRG 2 cut(s) 1643, 2269
BsiSI CCGG 4 cut(s) 55, 1604, 2037, 2353
BslFI GGGAC 6 cut(s) 538, 764, 884, 2110, 2849, 2858
BslI CCNNNNNNNGG 4 cut(s) 61, 856, 1009, 1549
BsmAI GTCTC 3 cut(s) 721, 1848, 2268
BsmBI CGTCTC 1 cut(s) 2268
BsmFI GGGAC 6 cut(s) 538, 764, 884, 2110, 2849, 2858
BsmI GAATGC 1 cut(s) 1562
BsnI GGCC 4 cut(s) 354, 601, 2289, 2858
BsoBI CYCGRG 2 cut(s) 1643, 2269
Bsp1286I GDGCHC 3 cut(s) 254, 897, 2270
Bsp13I TCCGGA 1 cut(s) 2352
Bsp1407I TGTACA 1 cut(s) 730
Bsp143I GATC 4 cut(s) 202, 538, 1330, 2391
BspACI CCGC 4 cut(s) 149, 436, 1168, 1453
BspANI GGCC 4 cut(s) 354, 601, 2289, 2858
BspCNI CTCAG 3 cut(s) 731, 938, 2832
BspEI TCCGGA 1 cut(s) 2352
BspFNI CGCG 1 cut(s) 952
BspHI TCATGA 3 cut(s) 379, 430, 541
BspLI GGNNCC 7 cut(s) 43, 600, 894, 1402, 1650, 1999, 2460
BspPI GGATC 1 cut(s) 2399
BsrBI CCGCTC 1 cut(s) 436
BsrDI GCAATG 4 cut(s) 384, 1050, 1962, 2151
BsrFI RCCGGY 1 cut(s) 2036
BsrGI TGTACA 1 cut(s) 730
BsrI ACTGG 3 cut(s) 355, 2238, 2810
BssAI RCCGGY 1 cut(s) 2036
BssECI CCNNGG 5 cut(s) 283, 1548, 1604, 1644, 2251
BssMI GATC 4 cut(s) 202, 538, 1330, 2391
BssT1I CCWWGG 2 cut(s) 283, 1548
Bst2UI CCWGG 2 cut(s) 857, 2252
Bst4CI ACNGT 5 cut(s) 915, 1183, 1676, 1853, 1877
Bst6I CTCTTC 2 cut(s) 1944, 2655
BstAPI GCANNNNNTGC 1 cut(s) 1906
BstAUI TGTACA 1 cut(s) 730
BstC8I GCNNGC 4 cut(s) 147, 194, 1133, 2363
BstDEI CTNAG 8 cut(s) 306, 718, 925, 1146, 1265, 1444, 1757, 2819
BstENI CCTNNNNNAGG 1 cut(s) 1547
BstFNI CGCG 1 cut(s) 952
BstHHI GCGC 2 cut(s) 1689, 2775
BstKTI GATC 4 cut(s) 205, 541, 1333, 2394
BstMAI GTCTC 3 cut(s) 721, 1848, 2268
BstMBI GATC 4 cut(s) 202, 538, 1330, 2391
BstMWI GCNNNNNNNGC 5 cut(s) 146, 189, 659, 958, 1906
BstNI CCWGG 2 cut(s) 857, 2252
BstNSI RCATGY 4 cut(s) 62, 74, 965, 2202
BstSCI CCNGG 3 cut(s) 855, 1603, 2250
BstSFI CTRYAG 2 cut(s) 664, 2786
BstUI CGCG 1 cut(s) 952
BstV1I GCAGC 4 cut(s) 1129, 2304, 2436, 2745
BstV2I GAAGAC 2 cut(s) 183, 2592
BstX2I RGATCY 1 cut(s) 2391
BstYI RGATCY 1 cut(s) 2391
Bsu36I CCTNAGG 1 cut(s) 1757
BsuRI GGCC 4 cut(s) 354, 601, 2289, 2858
BtrI CACGTC 1 cut(s) 2872
BtsIMutI CAGTG 2 cut(s) 252, 1188
Cac8I GCNNGC 4 cut(s) 147, 194, 1133, 2363
CciI TCATGA 3 cut(s) 379, 430, 541
CfoI GCGC 2 cut(s) 1689, 2775
Cfr10I RCCGGY 1 cut(s) 2036
Cfr13I GGNCC 6 cut(s) 599, 1649, 1998, 2287, 2459, 2856
Csp6I GTAC 6 cut(s) 302, 348, 696, 731, 972, 2754
CspAI ACCGGT 1 cut(s) 2036
CviAII CATG 9 cut(s) 59, 71, 380, 431, 542, 962, 1526, 2199, 2327
CviQI GTAC 6 cut(s) 302, 348, 696, 731, 972, 2754
DdeI CTNAG 8 cut(s) 306, 718, 925, 1146, 1265, 1444, 1757, 2819
DpnI GATC 4 cut(s) 204, 540, 1332, 2393
DpnII GATC 4 cut(s) 202, 538, 1330, 2391
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 2 cut(s) 1944, 2655
EarI CTCTTC 2 cut(s) 1944, 2655
EciI GGCGGA 1 cut(s) 164
Eco130I CCWWGG 2 cut(s) 283, 1548
Eco24I GRGCYC 2 cut(s) 897, 2270
Eco32I GATATC 1 cut(s) 1832
Eco47I GGWCC 3 cut(s) 1649, 1998, 2459
Eco57I CTGAAG 2 cut(s) 27, 1880
Eco81I CCTNAGG 1 cut(s) 1757
Eco88I CYCGRG 2 cut(s) 1643, 2269
EcoNI CCTNNNNNAGG 1 cut(s) 1547
EcoO109I RGGNCCY 2 cut(s) 599, 1998
EcoRI GAATTC 1 cut(s) 1865
EcoRII CCWGG 2 cut(s) 855, 2250
EcoRV GATATC 1 cut(s) 1832
EcoT14I CCWWGG 2 cut(s) 283, 1548
EcoT38I GRGCYC 2 cut(s) 897, 2270
ErhI CCWWGG 2 cut(s) 283, 1548
Esp3I CGTCTC 1 cut(s) 2268
FaeI CATG 9 cut(s) 62, 74, 383, 434, 545, 965, 1529, 2202, 2330
FalI AAGNNNNNCTT 6 cut(s) 741, 773, 1368, 1400, 2130, 2162
FaqI GGGAC 6 cut(s) 538, 764, 884, 2110, 2849, 2858
FatI CATG 9 cut(s) 58, 70, 379, 430, 541, 961, 1525, 2198, 2326
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 5 cut(s) 437, 1143, 2318, 2450, 2759
FriOI GRGCYC 2 cut(s) 897, 2270
Fsp4HI GCNGC 5 cut(s) 437, 1143, 2318, 2450, 2759
FspBI CTAG 7 cut(s) 557, 659, 969, 977, 1719, 1835, 2051
FspI TGCGCA 2 cut(s) 1688, 2774
GlaI GCGC 2 cut(s) 1688, 2774
GluI GCNGC 5 cut(s) 437, 1143, 2318, 2450, 2759
HaeIII GGCC 4 cut(s) 354, 601, 2289, 2858
HapII CCGG 4 cut(s) 55, 1604, 2037, 2353
HhaI GCGC 2 cut(s) 1689, 2775
Hin1II CATG 9 cut(s) 62, 74, 383, 434, 545, 965, 1529, 2202, 2330
Hin6I GCGC 2 cut(s) 1687, 2773
HinP1I GCGC 2 cut(s) 1687, 2773
HincII GTYRAC 3 cut(s) 1928, 2034, 2803
HindII GTYRAC 3 cut(s) 1928, 2034, 2803
HpaI GTTAAC 1 cut(s) 2034
HpaII CCGG 4 cut(s) 55, 1604, 2037, 2353
HphI GGTGA 5 cut(s) 40, 299, 583, 1031, 1079
Hpy166II GTNNAC 7 cut(s) 229, 241, 974, 1856, 1928, 2034, 2803
Hpy188I TCNGA 8 cut(s) 207, 366, 721, 823, 2229, 2412, 2691, 2822
Hpy8I GTNNAC 7 cut(s) 229, 241, 974, 1856, 1928, 2034, 2803
Hpy99I CGWCG 1 cut(s) 2482
HpyCH4III ACNGT 5 cut(s) 915, 1183, 1676, 1853, 1877
HpyCH4IV ACGT 3 cut(s) 1297, 2099, 2871
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 189, 659, 958, 1906
HpyF3I CTNAG 8 cut(s) 306, 718, 925, 1146, 1265, 1444, 1757, 2819
HpySE526I ACGT 3 cut(s) 1297, 2099, 2871
Hsp92II CATG 9 cut(s) 62, 74, 383, 434, 545, 965, 1529, 2202, 2330
HspAI GCGC 2 cut(s) 1687, 2773
Kpn2I TCCGGA 1 cut(s) 2352
KspAI GTTAAC 1 cut(s) 2034
Kzo9I GATC 4 cut(s) 202, 538, 1330, 2391
LmnI GCTCC 3 cut(s) 249, 892, 980
Lsp1109I GCAGC 4 cut(s) 1129, 2304, 2436, 2745
LweI GCATC 4 cut(s) 142, 179, 1990, 2167
MaeI CTAG 7 cut(s) 557, 659, 969, 977, 1719, 1835, 2051
MaeII ACGT 3 cut(s) 1297, 2099, 2871
MaeIII GTNAC 8 cut(s) 287, 358, 943, 1268, 1371, 1599, 2246, 2368
MalI GATC 4 cut(s) 204, 540, 1332, 2393
MbiI CCGCTC 1 cut(s) 436
MboI GATC 4 cut(s) 202, 538, 1330, 2391
MfeI CAATTG 2 cut(s) 507, 566
MflI RGATCY 1 cut(s) 2391
MhlI GDGCHC 3 cut(s) 254, 897, 2270
MlsI TGGCCA 1 cut(s) 354
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 6 cut(s) 818, 866, 1088, 2152, 2174, 2838
MmeI TCCRAC 1 cut(s) 1276
Mox20I TGGCCA 1 cut(s) 354
MroI TCCGGA 1 cut(s) 2352
MroXI GAANNNNTTC 2 cut(s) 690, 1865
MscI TGGCCA 1 cut(s) 354
MseI TTAA 9 cut(s) 459, 768, 1386, 1392, 1497, 1631, 1976, 2033, 2890
MslI CAYNNNNRTG 4 cut(s) 389, 913, 1986, 2067
Msp20I TGGCCA 1 cut(s) 354
MspA1I CMGCKG 1 cut(s) 2365
MspI CCGG 4 cut(s) 55, 1604, 2037, 2353
MspR9I CCNGG 3 cut(s) 857, 1605, 2252
MunI CAATTG 2 cut(s) 507, 566
Mva1269I GAATGC 1 cut(s) 1562
MvaI CCWGG 2 cut(s) 857, 2252
MvnI CGCG 1 cut(s) 952
MwoI GCNNNNNNNGC 5 cut(s) 146, 189, 659, 958, 1906
NciI CCSGG 1 cut(s) 1605
NdeII GATC 4 cut(s) 202, 538, 1330, 2391
NlaIII CATG 9 cut(s) 62, 74, 383, 434, 545, 965, 1529, 2202, 2330
NlaIV GGNNCC 7 cut(s) 43, 600, 894, 1402, 1650, 1999, 2460
NmuCI GTSAC 4 cut(s) 287, 358, 1371, 2246
NsbI TGCGCA 2 cut(s) 1688, 2774
NspI RCATGY 4 cut(s) 62, 74, 965, 2202
PaeR7I CTCGAG 1 cut(s) 2269
PagI TCATGA 3 cut(s) 379, 430, 541
PciI ACATGT 1 cut(s) 70
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 1562
PdmI GAANNNNTTC 2 cut(s) 690, 1865
PfeI GAWTC 5 cut(s) 427, 518, 1706, 2339, 2486
PfoI TCCNGGA 1 cut(s) 855
PinAI ACCGGT 1 cut(s) 2036
PkrI GCNGC 5 cut(s) 438, 1144, 2319, 2451, 2760
PleI GAGTC 6 cut(s) 818, 866, 1087, 2151, 2173, 2837
PpsI GAGTC 6 cut(s) 818, 866, 1087, 2151, 2173, 2837
PpuMI RGGWCCY 1 cut(s) 1998
PscI ACATGT 1 cut(s) 70
PsiI TTATAA 1 cut(s) 2262
Psp1406I AACGTT 1 cut(s) 1297
Psp5II RGGWCCY 1 cut(s) 1998
Psp6I CCWGG 2 cut(s) 855, 2250
PspGI CCWGG 2 cut(s) 855, 2250
PspN4I GGNNCC 7 cut(s) 43, 600, 894, 1402, 1650, 1999, 2460
PspPI GGNCC 6 cut(s) 599, 1649, 1998, 2287, 2459, 2856
PspPPI RGGWCCY 1 cut(s) 1998
PsrI GAACNNNNNNTAC 2 cut(s) 714, 746
PsuI RGATCY 1 cut(s) 2391
PvuII CAGCTG 1 cut(s) 2365
RsaI GTAC 6 cut(s) 303, 349, 697, 732, 973, 2755
RsaNI GTAC 6 cut(s) 302, 348, 696, 731, 972, 2754
RseI CAYNNNNRTG 4 cut(s) 389, 913, 1986, 2067
SaqAI TTAA 9 cut(s) 459, 768, 1386, 1392, 1497, 1631, 1976, 2033, 2890
SatI GCNGC 5 cut(s) 437, 1143, 2318, 2450, 2759
Sau3AI GATC 4 cut(s) 202, 538, 1330, 2391
Sau96I GGNCC 6 cut(s) 599, 1649, 1998, 2287, 2459, 2856
SchI GAGTC 6 cut(s) 818, 866, 1088, 2152, 2174, 2838
ScrFI CCNGG 3 cut(s) 857, 1605, 2252
SduI GDGCHC 3 cut(s) 254, 897, 2270
SfaNI GCATC 4 cut(s) 142, 179, 1990, 2167
SfcI CTRYAG 2 cut(s) 664, 2786
Sfr274I CTCGAG 1 cut(s) 2269
SinI GGWCC 3 cut(s) 1649, 1998, 2459
SlaI CTCGAG 1 cut(s) 2269
SmiMI CAYNNNNRTG 4 cut(s) 389, 913, 1986, 2067
SmlI CTYRAG 4 cut(s) 758, 1771, 2269, 2420
SmoI CTYRAG 4 cut(s) 758, 1771, 2269, 2420
SpeI ACTAGT 1 cut(s) 556
SsiI CCGC 4 cut(s) 149, 436, 1168, 1453
SspI AATATT 1 cut(s) 2698
SspMI CTAG 7 cut(s) 557, 659, 969, 977, 1719, 1835, 2051
StyD4I CCNGG 3 cut(s) 855, 1603, 2250
StyI CCWWGG 2 cut(s) 283, 1548
TaaI ACNGT 5 cut(s) 915, 1183, 1676, 1853, 1877
TaiI ACGT 3 cut(s) 1300, 2102, 2874
TaqI TCGA 9 cut(s) 222, 276, 425, 513, 811, 1709, 1784, 1992, 2270
TatI WGTACW 3 cut(s) 347, 730, 971
TauI GCSGC 1 cut(s) 439
TfiI GAWTC 5 cut(s) 427, 518, 1706, 2339, 2486
Tru1I TTAA 9 cut(s) 459, 768, 1386, 1392, 1497, 1631, 1976, 2033, 2890
Tru9I TTAA 9 cut(s) 459, 768, 1386, 1392, 1497, 1631, 1976, 2033, 2890
TscAI CASTG 2 cut(s) 259, 1188
TseFI GTSAC 4 cut(s) 287, 358, 1371, 2246
TseI GCWGC 4 cut(s) 1142, 2317, 2449, 2758
Tsp45I GTSAC 4 cut(s) 287, 358, 1371, 2246
TspDTI ATGAA 8 cut(s) 419, 531, 1122, 1569, 1626, 1962, 2051, 2213
TspGWI ACGGA 2 cut(s) 326, 1607
TspRI CASTG 2 cut(s) 259, 1188
VpaK11BI GGWCC 3 cut(s) 1649, 1998, 2459
XagI CCTNNNNNAGG 1 cut(s) 1547
XapI RAATTY 7 cut(s) 441, 473, 784, 936, 1223, 1865, 1937
XbaI TCTAGA 1 cut(s) 1834
XceI RCATGY 4 cut(s) 62, 74, 965, 2202
XhoI CTCGAG 1 cut(s) 2269
XmiI GTMKAC 1 cut(s) 228
XmnI GAANNNNTTC 2 cut(s) 690, 1865
XspI CTAG 7 cut(s) 557, 659, 969, 977, 1719, 1835, 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.