26S proteasome non-atpase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64520 AT5G42040 |
| fragaria_vesca | FvH4_5g11650 FvH4_6g31620 |
| malus_domestica | MD06G1111600.v1.1 MD14G1132800.v1.1 |
| prunus_persica | Prupe.5G124300_v2.0.a1 Prupe.5G124300_v2.0.a1 Prupe.5G124300_v2.0.a1 |
| pyrus_communis | pycom06g10450 |
| rosa_chinensis | RchiOBHm_Chr2g0138681 RchiOBHm_Chr7g0186141 |
| rosa_laevigata | RLG00000019755 |
| rosa_multiflora | Rmu_co8118366.1_g000001 Rmu_sc0007053.1_g000010 Rmu_sc0020594.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00106010 Rroxscaffold_3G00268390 |
| rosa_rugosa | Rorug02G0352200 Rorug06G0472300 |
| rosa_samantha | Rh2AG401800 Rh2BG405800 Rh2CG388000 Rh2DG421900 Rh7AG069200 Rh7BG085200 Rh7CG078900 Rh7DG079000 |
| rosa_wichuraiana | Rw2G032660 Rw7G006570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 450 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AccI | GTMKAC | 1 cut(s) | 228 |
| AccII | CGCG | 1 cut(s) | 952 |
| AcoI | YGGCCR | 1 cut(s) | 352 |
| AcsI | RAATTY | 3 cut(s) | 443, 473, 936 |
| AcuI | CTGAAG | 1 cut(s) | 27 |
| AcyI | GRCGYC | 1 cut(s) | 599 |
| AfaI | GTAC | 4 cut(s) | 221, 303, 349, 732 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 61 |
| AflIII | ACRYGT | 1 cut(s) | 58 |
| AgsI | TTSAA | 6 cut(s) | 137, 409, 461, 496, 770, 812 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 784 |
| AhlI | ACTAGT | 1 cut(s) | 556 |
| AluBI | AGCT | 2 cut(s) | 140, 422 |
| AluI | AGCT | 2 cut(s) | 140, 422 |
| Alw21I | GWGCWC | 1 cut(s) | 254 |
| Alw26I | GTCTC | 3 cut(s) | 181, 531, 721 |
| AoxI | GGCC | 1 cut(s) | 352 |
| ApoI | RAATTY | 3 cut(s) | 443, 473, 936 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 500 |
| AsuHPI | GGTGA | 1 cut(s) | 299 |
| BalI | TGGCCA | 1 cut(s) | 354 |
| BanII | GRGCYC | 1 cut(s) | 897 |
| BbsI | GAAGAC | 1 cut(s) | 602 |
| Bbv12I | GWGCWC | 1 cut(s) | 254 |
| BccI | CCATC | 1 cut(s) | 761 |
| BciVI | GTATCC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 3 cut(s) | 181, 531, 721 |
| BcuI | ACTAGT | 1 cut(s) | 556 |
| BfaI | CTAG | 3 cut(s) | 557, 659, 857 |
| BfuI | GTATCC | 1 cut(s) | 28 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 784 |
| BmiI | GGNNCC | 2 cut(s) | 43, 894 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BpiI | GAAGAC | 1 cut(s) | 602 |
| Bpu10I | CCTNAGC | 1 cut(s) | 925 |
| BpuEI | CTTGAG | 1 cut(s) | 779 |
| BsaHI | GRCGYC | 1 cut(s) | 599 |
| BsaJI | CCNNGG | 1 cut(s) | 283 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 61 |
| Bse1I | ACTGG | 1 cut(s) | 355 |
| Bse3DI | GCAATG | 1 cut(s) | 384 |
| BseDI | CCNNGG | 1 cut(s) | 283 |
| BseGI | GGATG | 1 cut(s) | 753 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseMI | GCAATG | 1 cut(s) | 384 |
| BseMII | CTCAG | 3 cut(s) | 732, 888, 939 |
| BseNI | ACTGG | 1 cut(s) | 355 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| Bsh1236I | CGCG | 1 cut(s) | 952 |
| BshFI | GGCC | 1 cut(s) | 354 |
| BsiHKAI | GWGCWC | 1 cut(s) | 254 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslFI | GGGAC | 2 cut(s) | 538, 884 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BsmAI | GTCTC | 3 cut(s) | 181, 531, 721 |
| BsmBI | CGTCTC | 1 cut(s) | 181 |
| BsmFI | GGGAC | 2 cut(s) | 538, 884 |
| BsnI | GGCC | 1 cut(s) | 354 |
| Bsp1286I | GDGCHC | 2 cut(s) | 254, 897 |
| Bsp1407I | TGTACA | 1 cut(s) | 730 |
| BspANI | GGCC | 1 cut(s) | 354 |
| BspCNI | CTCAG | 3 cut(s) | 731, 887, 938 |
| BspFNI | CGCG | 1 cut(s) | 952 |
| BspHI | TCATGA | 1 cut(s) | 430 |
| BspLI | GGNNCC | 2 cut(s) | 43, 894 |
| BsrDI | GCAATG | 1 cut(s) | 384 |
| BsrGI | TGTACA | 1 cut(s) | 730 |
| BsrI | ACTGG | 1 cut(s) | 355 |
| BssECI | CCNNGG | 1 cut(s) | 283 |
| BssNI | GRCGYC | 1 cut(s) | 599 |
| BssT1I | CCWWGG | 1 cut(s) | 283 |
| Bst4CI | ACNGT | 1 cut(s) | 742 |
| BstACI | GRCGYC | 1 cut(s) | 599 |
| BstAUI | TGTACA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 194 |
| BstDEI | CTNAG | 3 cut(s) | 718, 874, 925 |
| BstF5I | GGATG | 1 cut(s) | 753 |
| BstFNI | CGCG | 1 cut(s) | 952 |
| BstMAI | GTCTC | 3 cut(s) | 181, 531, 721 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 146, 189, 659, 958 |
| BstNSI | RCATGY | 1 cut(s) | 62 |
| BstUI | CGCG | 1 cut(s) | 952 |
| BstV2I | GAAGAC | 1 cut(s) | 602 |
| BsuI | GTATCC | 1 cut(s) | 28 |
| BsuRI | GGCC | 1 cut(s) | 354 |
| BtsCI | GGATG | 1 cut(s) | 753 |
| BtsIMutI | CAGTG | 1 cut(s) | 252 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 194 |
| CciI | TCATGA | 1 cut(s) | 430 |
| CseI | GACGC | 2 cut(s) | 198, 607 |
| Csp6I | GTAC | 4 cut(s) | 220, 302, 348, 731 |
| CviAII | CATG | 2 cut(s) | 59, 431 |
| CviJI | RGCY | 9 cut(s) | 5, 140, 196, 354, 422, 662, 752, 895, 924 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 140, 196, 354, 422, 662, 752, 895, 924 |
| CviQI | GTAC | 4 cut(s) | 220, 302, 348, 731 |
| DdeI | CTNAG | 3 cut(s) | 718, 874, 925 |
| DriI | GACNNNNNGTC | 1 cut(s) | 784 |
| EaeI | YGGCCR | 1 cut(s) | 352 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 784 |
| Eco130I | CCWWGG | 1 cut(s) | 283 |
| Eco24I | GRGCYC | 1 cut(s) | 897 |
| Eco57I | CTGAAG | 1 cut(s) | 27 |
| EcoT14I | CCWWGG | 1 cut(s) | 283 |
| EcoT38I | GRGCYC | 1 cut(s) | 897 |
| ErhI | CCWWGG | 1 cut(s) | 283 |
| Esp3I | CGTCTC | 1 cut(s) | 181 |
| FaeI | CATG | 2 cut(s) | 62, 434 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 741, 773 |
| FaqI | GGGAC | 2 cut(s) | 538, 884 |
| FatI | CATG | 2 cut(s) | 58, 430 |
| FblI | GTMKAC | 1 cut(s) | 228 |
| FokI | GGATG | 1 cut(s) | 740 |
| FriOI | GRGCYC | 1 cut(s) | 897 |
| FspBI | CTAG | 3 cut(s) | 557, 659, 857 |
| HaeIII | GGCC | 1 cut(s) | 354 |
| HgaI | GACGC | 2 cut(s) | 198, 607 |
| Hin1I | GRCGYC | 1 cut(s) | 599 |
| Hin1II | CATG | 2 cut(s) | 62, 434 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HinfI | GANTC | 2 cut(s) | 427, 872 |
| HphI | GGTGA | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 3 cut(s) | 109, 229, 241 |
| Hpy188I | TCNGA | 4 cut(s) | 207, 366, 721, 877 |
| Hpy188III | TCNNGA | 5 cut(s) | 277, 380, 431, 767, 901 |
| Hpy8I | GTNNAC | 3 cut(s) | 109, 229, 241 |
| Hpy99I | CGWCG | 1 cut(s) | 381 |
| HpyAV | CCTTC | 7 cut(s) | 31, 55, 307, 343, 467, 857, 907 |
| HpyCH4III | ACNGT | 1 cut(s) | 742 |
| HpyCH4V | TGCA | 1 cut(s) | 155 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 146, 189, 659, 958 |
| HpyF3I | CTNAG | 3 cut(s) | 718, 874, 925 |
| Hsp92I | GRCGYC | 1 cut(s) | 599 |
| Hsp92II | CATG | 2 cut(s) | 62, 434 |
| LmnI | GCTCC | 2 cut(s) | 249, 892 |
| LpnPI | CCDG | 6 cut(s) | 131, 178, 336, 498, 507, 912 |
| LweI | GCATC | 1 cut(s) | 142 |
| MaeI | CTAG | 3 cut(s) | 557, 659, 857 |
| MaeIII | GTNAC | 4 cut(s) | 287, 358, 380, 943 |
| MboII | GAAGA | 4 cut(s) | 43, 599, 607, 800 |
| MfeI | CAATTG | 1 cut(s) | 507 |
| MhlI | GDGCHC | 2 cut(s) | 254, 897 |
| MlsI | TGGCCA | 1 cut(s) | 354 |
| MluCI | AATT | 5 cut(s) | 369, 443, 473, 507, 936 |
| MluNI | TGGCCA | 1 cut(s) | 354 |
| MlyI | GAGTC | 1 cut(s) | 866 |
| MmeI | TCCRAC | 1 cut(s) | 79 |
| Mox20I | TGGCCA | 1 cut(s) | 354 |
| MroXI | GAANNNNTTC | 1 cut(s) | 500 |
| MscI | TGGCCA | 1 cut(s) | 354 |
| MslI | CAYNNNNRTG | 2 cut(s) | 389, 913 |
| Msp20I | TGGCCA | 1 cut(s) | 354 |
| MunI | CAATTG | 1 cut(s) | 507 |
| MvnI | CGCG | 1 cut(s) | 952 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 146, 189, 659, 958 |
| NlaIII | CATG | 2 cut(s) | 62, 434 |
| NlaIV | GGNNCC | 2 cut(s) | 43, 894 |
| NmuCI | GTSAC | 3 cut(s) | 287, 358, 380 |
| NspI | RCATGY | 1 cut(s) | 62 |
| PagI | TCATGA | 1 cut(s) | 430 |
| PciI | ACATGT | 1 cut(s) | 58 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PdmI | GAANNNNTTC | 1 cut(s) | 500 |
| PfeI | GAWTC | 1 cut(s) | 427 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 866 |
| PpsI | GAGTC | 1 cut(s) | 866 |
| PscI | ACATGT | 1 cut(s) | 58 |
| PsiI | TTATAA | 1 cut(s) | 450 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 2 cut(s) | 43, 894 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 714, 746 |
| RsaI | GTAC | 4 cut(s) | 221, 303, 349, 732 |
| RsaNI | GTAC | 4 cut(s) | 220, 302, 348, 731 |
| RseI | CAYNNNNRTG | 2 cut(s) | 389, 913 |
| SchI | GAGTC | 1 cut(s) | 866 |
| SduI | GDGCHC | 2 cut(s) | 254, 897 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 389, 913 |
| SmlI | CTYRAG | 1 cut(s) | 758 |
| SmoI | CTYRAG | 1 cut(s) | 758 |
| SpeI | ACTAGT | 1 cut(s) | 556 |
| Sse9I | AATT | 5 cut(s) | 369, 443, 473, 507, 936 |
| SspMI | CTAG | 3 cut(s) | 557, 659, 857 |
| StyI | CCWWGG | 1 cut(s) | 283 |
| TaaI | ACNGT | 1 cut(s) | 742 |
| TaqI | TCGA | 2 cut(s) | 276, 513 |
| TasI | AATT | 5 cut(s) | 369, 443, 473, 507, 936 |
| TatI | WGTACW | 1 cut(s) | 730 |
| TfiI | GAWTC | 1 cut(s) | 427 |
| TscAI | CASTG | 1 cut(s) | 259 |
| TseFI | GTSAC | 3 cut(s) | 287, 358, 380 |
| Tsp45I | GTSAC | 3 cut(s) | 287, 358, 380 |
| TspDTI | ATGAA | 7 cut(s) | 37, 419, 447, 480, 563, 683, 687 |
| TspGWI | ACGGA | 1 cut(s) | 326 |
| TspRI | CASTG | 1 cut(s) | 259 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| XapI | RAATTY | 3 cut(s) | 443, 473, 936 |
| XceI | RCATGY | 1 cut(s) | 62 |
| XmiI | GTMKAC | 1 cut(s) | 228 |
| XmnI | GAANNNNTTC | 1 cut(s) | 500 |
| XspI | CTAG | 3 cut(s) | 557, 659, 857 |