Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006220

Physical Location & Seq

Genomic Coordinates Reverse (-)

63304366 .. 63306967

Gene Structure 2602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0500400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGATCCTAATAGTTCCCCTGGTTCGGATGGATTTAGTGGTAGTTTCTTTCTTGCTTGTTGGGACCTGGTTGGTGTAGATGTGGTGCAAGCTGTTCAGTTCTTTTTTCAGCATGGTACTCTTCCAAACTCTTTTAACTCGAGTTTGATTATTCTGATTCCAAAAGTTATTAATGCAGATTCGATTAAGCAGTATCGACCTATTGCACTTGTCAATTTTGTATTCAAAATCATTCCAAAAATCCTATCTCTAAGGCTTGCTTCTATTGCTTCAATAATTATTTCTCCCCAGCAGCATGCCTTTGTTCCCAGACGAAATATTGCGGATTGCATTCTTACCACTTCGGAATGTGTCAACTTGTTGGATAACAAGAATCATGGAGGCAATGTGGCTATAAAATTGGATATTTTTCGTGTGGTAGAGGTGTACGTACGCCAGGGGGATCCTCTATCGCCATTACTATTCTGCTTAGCAGAGGAGGTTCTCAGCAGGGGTATATCTGAGCTTATGTTGGCTGGTCGGCTGCATCCTATATCCTCTCCTCGTGGTACTTTTTCCCCATATCATGATTTATTTGCCGACGATGTTATTATCTTTTGCCGTGGCGATAAACGTAATTTGTCTTTGATTTTGGATTTCTTTGACGAATACGGGACTAACTCTGGACAATTAATAAATAAGGAAAAGAGGTTGGAAGTTTGGTGCAGGAATTTTTTGTGGTTTGGATCTATTGATAAACGGGGTGTACCTTTAATGGCTTGGAAGTTATGTTGTACTCCAATCGTGGAGGGGGGTTTGGGTCTAAAGCAACTTGTACTTCTTAATCGCTCATTCTTATTAAAGAAGTGTTGGGAGATTTATTCCTCTTCTTCAACAAGTTGTGATTTTATTCGAAATAGATTTTGGCGTAATGGATCTCTACGTAGCTCTTATGCATGCTCTTCCATATGGTTAGGAGTGCGCAAATTCTTGTCCTTGGTTCTTGAAAATGCAAGATGGCTTATTGGTTCTGGAGCTTCAGTTTCTTTTTGGCACGATAATTTCTTGGGTAGGCCTCTTATTGATCTTTTCAGTAATCATCTTGGCTTACTTCATTCATTGGAAGGACAGGTGGCAGATTTTATTCAAAATGGCTCTTGGAATTTTCCTCACTTGCTACAATTTCATTATCCAAGCCTTTGTGATATGATCAGCAGAGTTCCAGTGGCTGTGGACCCCTTGAAACATGATAGGCTTATTTGGTCAGCATTAAAATCTGGTGTATTAACTGCCAAGGAGGCTTTTCAATTTCTACACCCTCACTCTCCCGTTCTTGATTGGGGAGGATTAATTTGGTGCAAATTCATTACTCCCAGAATTTCGTTACTAGTTTGGAAGGTGTTACGGGGTCGGTTGGCTGCACGTCCAAGCTCTTTGTTGGATTTGTTGCATGCTGGAAGAGGGAATGATCGAAGTCCTCAATTGAAGGAGCTTTGGTTAAATTGTTTCTGTACGACTTTGTGGTTTCTTTGGAAAACACGTAATAAAGTCAAGTTTGAGGATTATGCTTGTTCTCCAACTCATTGCTTTGATGTCCCTTGTAAGCCTAGAAGAGCTCCCCGAATTGTAGAAGTGAACTGGGTTCCTCCTATCCTCGATTGCATCAAGATCAATACCAACGGGGCTTTTAATCATGATTCAGGCAAGGCTAGTTTTGGGGGAGTTTTCCGCAATTTTAGGGGTGAGTTTATTGGTGCCTTTGCATGTAATCTTGACATCCCTTGTTTAGTAGACGCGGAGGTGATGGCTGTTATTAAGGCAATTGAATTAGCTTGGGTGCGGGAGTGGAAGTATATTTGGCTAGAAGTTTACTCTTCCCTTGTTCTTAAATTCCTCAATTCCTCAATTTCCCTCAGCTTGTTCCATGGAGACTTCGTGTGGCATGGGATAATTGTATGTTTCATGTCTCTCAGATGCAATTTCGTTGTTCTCATATATTCCGAGAAGGAAATCAAGTTGCAGATGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rhomboid

Protein Analysis

669

Amino Acids

75.93

Weight (kDa)

8.88

Isoelectric Point (pI)

40.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	141 - 239	6.4e-07	Reverse transcriptase (RNA-dependent DNA polymerase)
RVT_3	PF13456	551 - 628	3.6e-10	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38510 AT5G38510 AT5G38510
fragaria_vesca	FvH4_6g45321 FvH4_6g45321 FvH4_6g45321
malus_domestica	MD09G1085700.v1.1 MD17G1074600.v1.1
prunus_persica	Prupe.3G239300_v2.0.a1
pyrus_communis	pycom09g01080 pycom09g01090 pycom17g07540
rosa_chinensis	RchiOBHm_Chr2g0163101
rosa_laevigata	RLG00000021373
rosa_multiflora	Rmu_sc0003555.1_g000002 Rmu_sc0003984.1_g000017
rosa_roxburghii	Rroxscaffold_2G00087550
rosa_rugosa	Rorug02G0500400 Rorug02G0500500 Rorug02G0500500 Rorug02G0500500 Rorug02G0500500
rosa_samantha	Rh2AG566800 Rh2BG579100 Rh2CG549000 Rh2DG589400
rosa_wichuraiana	Rw2G046930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	962
AccB1I	GGYRCC	1 cut(s)	1733
AccI	GTMKAC	1 cut(s)	1770
AccII	CGCG	1 cut(s)	1775
AciI	CCGC	4 cut(s)	323, 1708, 1775, 1819
AclWI	GGATC	5 cut(s)	12, 437, 450, 733, 922
AcsI	RAATTY	6 cut(s)	709, 965, 1141, 1340, 1356, 1868
AcuI	CTGAAG	1 cut(s)	1002
AfaI	GTAC	8 cut(s)	118, 428, 432, 550, 747, 775, 816, 1492
AfiI	CCNNNNNNNGG	1 cut(s)	25
AflIII	ACRYGT	1 cut(s)	1517
AgsI	TTSAA	9 cut(s)	226, 273, 873, 986, 1127, 1222, 1286, 1465, 1805
AhlI	ACTAGT	1 cut(s)	1366
AjiI	CACGTC	1 cut(s)	1403
AjnI	CCWGG	3 cut(s)	19, 66, 435
AjuI	GAANNNNNNNTTGG	2 cut(s)	886, 918
AluBI	AGCT	9 cut(s)	92, 505, 927, 1016, 1410, 1471, 1595, 1811, 1896
AluI	AGCT	9 cut(s)	92, 505, 927, 1016, 1410, 1471, 1595, 1811, 1896
Alw21I	GWGCWC	1 cut(s)	1597
Alw26I	GTCTC	2 cut(s)	1902, 1950
AlwI	GGATC	5 cut(s)	12, 437, 450, 733, 922
AlwNI	CAGNNNCTG	1 cut(s)	1208
Ama87I	CYCGRG	1 cut(s)	139
AoxI	GGCC	1 cut(s)	1052
ApeKI	GCWGC	3 cut(s)	292, 523, 1397
ApoI	RAATTY	6 cut(s)	709, 965, 1141, 1340, 1356, 1868
AseI	ATTAAT	3 cut(s)	171, 671, 1328
AspLEI	GCGC	1 cut(s)	963
AspS9I	GGNCC	2 cut(s)	64, 1213
AsuHPI	GGTGA	2 cut(s)	1733, 1792
AsuII	TTCGAA	1 cut(s)	892
AvaI	CYCGRG	1 cut(s)	139
AvaII	GGWCC	2 cut(s)	64, 1213
BamHI	GGATCC	2 cut(s)	4, 442
BanI	GGYRCC	1 cut(s)	1733
BanII	GRGCYC	1 cut(s)	1597
BauI	CACGAG	1 cut(s)	543
Bbv12I	GWGCWC	1 cut(s)	1597
BbvCI	CCTCAGC	1 cut(s)	1892
BbvI	GCAGC	3 cut(s)	304, 510, 1384
BccI	CCATC	3 cut(s)	23, 990, 1777
BceAI	ACGGC	1 cut(s)	585
BciT130I	CCWGG	3 cut(s)	21, 68, 437
BclI	TGATCA	1 cut(s)	1188
BcoDI	GTCTC	2 cut(s)	1902, 1950
BcuI	ACTAGT	1 cut(s)	1366
BfaI	CTAG	4 cut(s)	1367, 1587, 1689, 1841
BglI	GCCNNNNNGGC	1 cut(s)	1277
BisI	GCNGC	3 cut(s)	293, 524, 1398
BlpI	GCTNAGC	1 cut(s)	469
BlsI	GCNGC	3 cut(s)	294, 525, 1399
Bme1390I	CCNGG	3 cut(s)	21, 68, 437
Bme18I	GGWCC	2 cut(s)	64, 1213
BmeT110I	CYCGRG	1 cut(s)	139
BmgBI	CACGTC	1 cut(s)	1403
BmgT120I	GGNCC	2 cut(s)	64, 1213
BmiI	GGNNCC	6 cut(s)	6, 65, 444, 1215, 1623, 1735
BmrFI	CCNGG	3 cut(s)	21, 68, 437
BmrI	ACTGGG	1 cut(s)	1627
BmsI	GCATC	4 cut(s)	535, 1650, 1943, 1992
BmuI	ACTGGG	1 cut(s)	1627
BpmI	CTGGAG	1 cut(s)	1032
Bpu10I	CCTNAGC	1 cut(s)	1892
Bpu1102I	GCTNAGC	1 cut(s)	469
Bpu14I	TTCGAA	1 cut(s)	892
BsaAI	YACGTR	3 cut(s)	430, 923, 1520
BsaJI	CCNNGG	6 cut(s)	19, 436, 601, 975, 1272, 1903
Bsc4I	CCNNNNNNNGG	1 cut(s)	25
Bse1I	ACTGG	2 cut(s)	1202, 1622
Bse3DI	GCAATG	2 cut(s)	391, 1561
BseBI	CCWGG	3 cut(s)	21, 68, 437
BseDI	CCNNGG	6 cut(s)	19, 436, 601, 975, 1272, 1903
BseGI	GGATG	3 cut(s)	34, 526, 1755
BseLI	CCNNNNNNNGG	1 cut(s)	25
BseMI	GCAATG	2 cut(s)	391, 1561
BseMII	CTCAG	4 cut(s)	492, 499, 1906, 1963
BseNI	ACTGG	2 cut(s)	1202, 1622
BseRI	GAGGAG	2 cut(s)	491, 531
BseXI	GCAGC	3 cut(s)	304, 510, 1384
BseYI	CCCAGC	1 cut(s)	288
BsgI	GTGCAG	2 cut(s)	724, 1383
Bsh1236I	CGCG	1 cut(s)	1775
BshFI	GGCC	1 cut(s)	1054
BshNI	GGYRCC	1 cut(s)	1733
BsiHKAI	GWGCWC	1 cut(s)	1597
BsiHKCI	CYCGRG	1 cut(s)	139
BsiWI	CGTACG	1 cut(s)	430
BslFI	GGGAC	3 cut(s)	77, 667, 1559
BslI	CCNNNNNNNGG	1 cut(s)	25
BsmAI	GTCTC	2 cut(s)	1902, 1950
BsmFI	GGGAC	3 cut(s)	77, 667, 1559
BsmI	GAATGC	1 cut(s)	330
BsnI	GGCC	1 cut(s)	1054
BsoBI	CYCGRG	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	892
Bsp1286I	GDGCHC	1 cut(s)	1597
Bsp143I	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
Bsp1720I	GCTNAGC	1 cut(s)	469
Bsp19I	CCATGG	1 cut(s)	1903
BspACI	CCGC	4 cut(s)	323, 1708, 1775, 1819
BspANI	GGCC	1 cut(s)	1054
BspCNI	CTCAG	4 cut(s)	493, 498, 1905, 1962
BspFNI	CGCG	1 cut(s)	1775
BspHI	TCATGA	2 cut(s)	565, 1672
BspLI	GGNNCC	6 cut(s)	6, 65, 444, 1215, 1623, 1735
BspPI	GGATC	5 cut(s)	12, 437, 450, 733, 922
BspQI	GCTCTTC	2 cut(s)	946, 1585
BspT104I	TTCGAA	1 cut(s)	892
BspT107I	GGYRCC	1 cut(s)	1733
BsrDI	GCAATG	2 cut(s)	391, 1561
BsrI	ACTGG	2 cut(s)	1202, 1622
BssECI	CCNNGG	6 cut(s)	19, 436, 601, 975, 1272, 1903
BssMI	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	3 cut(s)	975, 1272, 1903
Bst2BI	CACGAG	1 cut(s)	543
Bst2UI	CCWGG	3 cut(s)	21, 68, 437
Bst6I	CTCTTC	6 cut(s)	126, 871, 946, 1432, 1585, 1858
BstBAI	YACGTR	3 cut(s)	430, 923, 1520
BstBI	TTCGAA	1 cut(s)	892
BstC8I	GCNNGC	5 cut(s)	90, 258, 297, 937, 1431
BstDEI	CTNAG	6 cut(s)	251, 469, 485, 501, 1892, 1949
BstDSI	CCRYGG	2 cut(s)	601, 1903
BstF5I	GGATG	3 cut(s)	34, 526, 1755
BstFNI	CGCG	1 cut(s)	1775
BstHHI	GCGC	1 cut(s)	963
BstKTI	GATC	8 cut(s)	7, 445, 728, 917, 1066, 1191, 1450, 1650
BstMAI	GTCTC	2 cut(s)	1902, 1950
BstMBI	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
BstMWI	GCNNNNNNNGC	2 cut(s)	266, 1277
BstNI	CCWGG	3 cut(s)	21, 68, 437
BstNSI	RCATGY	4 cut(s)	299, 939, 1433, 1746
BstSCI	CCNGG	3 cut(s)	19, 66, 435
BstSNI	TACGTA	2 cut(s)	430, 923
BstUI	CGCG	1 cut(s)	1775
BstV1I	GCAGC	3 cut(s)	304, 510, 1384
BstX2I	RGATCY	4 cut(s)	4, 442, 725, 914
BstYI	RGATCY	4 cut(s)	4, 442, 725, 914
BsuRI	GGCC	1 cut(s)	1054
BtgI	CCRYGG	2 cut(s)	601, 1903
BtrI	CACGTC	1 cut(s)	1403
BtsCI	GGATG	3 cut(s)	34, 526, 1755
BtsIMutI	CAGTG	1 cut(s)	1209
Cac8I	GCNNGC	5 cut(s)	90, 258, 297, 937, 1431
CaiI	CAGNNNCTG	1 cut(s)	1208
CciI	TCATGA	2 cut(s)	565, 1672
CfoI	GCGC	1 cut(s)	963
Cfr13I	GGNCC	2 cut(s)	64, 1213
CseI	GACGC	1 cut(s)	1781
CsiI	ACCWGGT	1 cut(s)	66
Csp6I	GTAC	8 cut(s)	117, 427, 431, 549, 746, 774, 815, 1491
CviQI	GTAC	8 cut(s)	117, 427, 431, 549, 746, 774, 815, 1491
DdeI	CTNAG	6 cut(s)	251, 469, 485, 501, 1892, 1949
DpnI	GATC	8 cut(s)	6, 444, 727, 916, 1065, 1190, 1449, 1649
DpnII	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
Eam1104I	CTCTTC	6 cut(s)	126, 871, 946, 1432, 1585, 1858
EarI	CTCTTC	6 cut(s)	126, 871, 946, 1432, 1585, 1858
Ecl136II	GAGCTC	1 cut(s)	1595
Eco105I	TACGTA	2 cut(s)	430, 923
Eco130I	CCWWGG	3 cut(s)	975, 1272, 1903
Eco147I	AGGCCT	1 cut(s)	1054
Eco24I	GRGCYC	1 cut(s)	1597
Eco47I	GGWCC	2 cut(s)	64, 1213
Eco53kI	GAGCTC	1 cut(s)	1595
Eco57I	CTGAAG	1 cut(s)	1002
Eco88I	CYCGRG	1 cut(s)	139
EcoICRI	GAGCTC	1 cut(s)	1595
EcoO109I	RGGNCCY	1 cut(s)	64
EcoRII	CCWGG	3 cut(s)	19, 66, 435
EcoT14I	CCWWGG	3 cut(s)	975, 1272, 1903
EcoT22I	ATGCAT	1 cut(s)	937
EcoT38I	GRGCYC	1 cut(s)	1597
ErhI	CCWWGG	3 cut(s)	975, 1272, 1903
FalI	AAGNNNNNCTT	2 cut(s)	244, 276
FaqI	GGGAC	3 cut(s)	77, 667, 1559
FauI	CCCGC	1 cut(s)	1812
FauNDI	CATATG	1 cut(s)	947
FbaI	TGATCA	1 cut(s)	1188
FblI	GTMKAC	1 cut(s)	1770
Fnu4HI	GCNGC	3 cut(s)	293, 524, 1398
FokI	GGATG	3 cut(s)	41, 513, 1742
FriOI	GRGCYC	1 cut(s)	1597
Fsp4HI	GCNGC	3 cut(s)	293, 524, 1398
FspBI	CTAG	4 cut(s)	1367, 1587, 1689, 1841
FspI	TGCGCA	1 cut(s)	962
GlaI	GCGC	1 cut(s)	962
GluI	GCNGC	3 cut(s)	293, 524, 1398
GsaI	CCCAGC	1 cut(s)	292
GsuI	CTGGAG	1 cut(s)	1032
HaeIII	GGCC	1 cut(s)	1054
HgaI	GACGC	1 cut(s)	1781
HhaI	GCGC	1 cut(s)	963
Hin6I	GCGC	1 cut(s)	961
HinP1I	GCGC	1 cut(s)	961
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HinfI	GANTC	4 cut(s)	157, 179, 373, 1676
HphI	GGTGA	2 cut(s)	1733, 1792
Hpy166II	GTNNAC	7 cut(s)	355, 427, 746, 1213, 1615, 1771, 1849
Hpy188I	TCNGA	6 cut(s)	28, 156, 346, 502, 1952, 1981
Hpy188III	TCNNGA	8 cut(s)	566, 663, 983, 1011, 1313, 1645, 1673, 1751
Hpy8I	GTNNAC	7 cut(s)	355, 427, 746, 1213, 1615, 1771, 1849
Hpy99I	CGWCG	1 cut(s)	584
HpyAV	CCTTC	4 cut(s)	1097, 1369, 1459, 1978
HpyCH4IV	ACGT	5 cut(s)	429, 613, 922, 1402, 1519
HpyF10VI	GCNNNNNNNGC	2 cut(s)	266, 1277
HpyF3I	CTNAG	6 cut(s)	251, 469, 485, 501, 1892, 1949
HpySE526I	ACGT	5 cut(s)	429, 613, 922, 1402, 1519
HspAI	GCGC	1 cut(s)	961
Ksp22I	TGATCA	1 cut(s)	1188
Kzo9I	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
LguI	GCTCTTC	2 cut(s)	946, 1585
LmnI	GCTCC	3 cut(s)	1013, 1468, 1600
Lsp1109I	GCAGC	3 cut(s)	304, 510, 1384
LweI	GCATC	4 cut(s)	535, 1650, 1943, 1992
MabI	ACCWGGT	1 cut(s)	66
MaeI	CTAG	4 cut(s)	1367, 1587, 1689, 1841
MaeII	ACGT	5 cut(s)	429, 613, 922, 1402, 1519
MaeIII	GTNAC	2 cut(s)	1362, 1380
MalI	GATC	8 cut(s)	6, 444, 727, 916, 1065, 1190, 1449, 1649
MboI	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
MboII	GAAGA	7 cut(s)	113, 858, 861, 933, 1449, 1602, 1845
MfeI	CAATTG	2 cut(s)	1460, 1800
MflI	RGATCY	4 cut(s)	4, 442, 725, 914
MhlI	GDGCHC	1 cut(s)	1597
MmeI	TCCRAC	4 cut(s)	342, 672, 1398, 1580
Mph1103I	ATGCAT	1 cut(s)	937
MspR9I	CCNGG	3 cut(s)	21, 68, 437
MunI	CAATTG	2 cut(s)	1460, 1800
Mva1269I	GAATGC	1 cut(s)	330
MvaI	CCWGG	3 cut(s)	21, 68, 437
MvnI	CGCG	1 cut(s)	1775
MwoI	GCNNNNNNNGC	2 cut(s)	266, 1277
NcoI	CCATGG	1 cut(s)	1903
NdeI	CATATG	1 cut(s)	947
NdeII	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
NlaIV	GGNNCC	6 cut(s)	6, 65, 444, 1215, 1623, 1735
NsbI	TGCGCA	1 cut(s)	962
NsiI	ATGCAT	1 cut(s)	937
NspI	RCATGY	4 cut(s)	299, 939, 1433, 1746
NspV	TTCGAA	1 cut(s)	892
PaeI	GCATGC	3 cut(s)	299, 939, 1433
PaeR7I	CTCGAG	1 cut(s)	139
PagI	TCATGA	2 cut(s)	565, 1672
PceI	AGGCCT	1 cut(s)	1054
PciSI	GCTCTTC	2 cut(s)	946, 1585
PctI	GAATGC	1 cut(s)	330
PfeI	GAWTC	4 cut(s)	157, 179, 373, 1676
Pfl23II	CGTACG	1 cut(s)	430
PkrI	GCNGC	3 cut(s)	294, 525, 1399
Ppu21I	YACGTR	3 cut(s)	430, 923, 1520
PpuMI	RGGWCCY	1 cut(s)	64
PshBI	ATTAAT	3 cut(s)	171, 671, 1328
Psp124BI	GAGCTC	1 cut(s)	1597
Psp5II	RGGWCCY	1 cut(s)	64
Psp6I	CCWGG	3 cut(s)	19, 66, 435
PspFI	CCCAGC	1 cut(s)	288
PspGI	CCWGG	3 cut(s)	19, 66, 435
PspLI	CGTACG	1 cut(s)	430
PspN4I	GGNNCC	6 cut(s)	6, 65, 444, 1215, 1623, 1735
PspPI	GGNCC	2 cut(s)	64, 1213
PspPPI	RGGWCCY	1 cut(s)	64
PspXI	VCTCGAGB	1 cut(s)	139
PstNI	CAGNNNCTG	1 cut(s)	1208
PsuI	RGATCY	4 cut(s)	4, 442, 725, 914
RsaI	GTAC	8 cut(s)	118, 428, 432, 550, 747, 775, 816, 1492
RsaNI	GTAC	8 cut(s)	117, 427, 431, 549, 746, 774, 815, 1491
SacI	GAGCTC	1 cut(s)	1597
SapI	GCTCTTC	2 cut(s)	946, 1585
SatI	GCNGC	3 cut(s)	293, 524, 1398
Sau3AI	GATC	8 cut(s)	4, 442, 725, 914, 1063, 1188, 1447, 1647
Sau96I	GGNCC	2 cut(s)	64, 1213
ScrFI	CCNGG	3 cut(s)	21, 68, 437
SduI	GDGCHC	1 cut(s)	1597
SexAI	ACCWGGT	1 cut(s)	66
SfaNI	GCATC	4 cut(s)	535, 1650, 1943, 1992
Sfr274I	CTCGAG	1 cut(s)	139
SfuI	TTCGAA	1 cut(s)	892
SinI	GGWCC	2 cut(s)	64, 1213
SlaI	CTCGAG	1 cut(s)	139
SmlI	CTYRAG	1 cut(s)	139
SmoI	CTYRAG	1 cut(s)	139
SnaBI	TACGTA	2 cut(s)	430, 923
SpeI	ACTAGT	1 cut(s)	1366
SphI	GCATGC	3 cut(s)	299, 939, 1433
SseBI	AGGCCT	1 cut(s)	1054
SsiI	CCGC	4 cut(s)	323, 1708, 1775, 1819
SspI	AATATT	1 cut(s)	319
SspMI	CTAG	4 cut(s)	1367, 1587, 1689, 1841
SstI	GAGCTC	1 cut(s)	1597
StuI	AGGCCT	1 cut(s)	1054
StyD4I	CCNGG	3 cut(s)	19, 66, 435
StyI	CCWWGG	3 cut(s)	975, 1272, 1903
TaiI	ACGT	5 cut(s)	432, 616, 925, 1405, 1522
TaqI	TCGA	6 cut(s)	140, 182, 196, 892, 1450, 1635
TatI	WGTACW	2 cut(s)	773, 814
TfiI	GAWTC	4 cut(s)	157, 179, 373, 1676
TscAI	CASTG	1 cut(s)	1209
TseI	GCWGC	3 cut(s)	292, 523, 1397
TspDTI	ATGAA	5 cut(s)	1082, 1086, 1154, 1333, 1930
TspRI	CASTG	1 cut(s)	1209
VpaK11BI	GGWCC	2 cut(s)	64, 1213
VspI	ATTAAT	3 cut(s)	171, 671, 1328
XapI	RAATTY	6 cut(s)	709, 965, 1141, 1340, 1356, 1868
XceI	RCATGY	4 cut(s)	299, 939, 1433, 1746
XhoI	CTCGAG	1 cut(s)	139
XmiI	GTMKAC	1 cut(s)	1770
XspI	CTAG	4 cut(s)	1367, 1587, 1689, 1841
Zsp2I	ATGCAT	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.