Rorug02G0641500

Acyltransferase-like protein At1g54570

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
75353329 .. 75360057
6729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0641500.1

Sequence Viewer

Length: 1797 bp
ATGGTTATAGGCTTAAAGGCGAAGAACCACAGAGGTCCTACTGTTCAGATTGATTATCTAGTCCATATTCTTGAGATTAAGCCTTGGCCGCCGTCACAGATTGAGTTCAGCGAGGCTTTTAAGTTACCTGTGACTTTACTGAGGGATGTGGCTGTAAAAGGAGGTGGTGAAGGTGATGCATTTCTGAAGAATTGCTTAGAGTTGAACTTGTATGAGCCTCGGAGGGATAAGACTGCGAAAGGTCAGTTGTTGGCGACTGCGATTATAGATTTAGCTGATTATGGTGTTGTGAAAGAGTGCATAAGTGTAAGTGCTCTGATGAACAGTAAGAGGAGCTTTAAGAACACAGATAAACCGATTTTGTATATGAAAATTCAGCCATTAAAGAAGGGTCGTGCCAGCACCTCATCTAGGGAAAGCTTGTCAAGAGAGTATCACTGGACAAGGCAGGTGGTGAATGAATCTGTTTCGGCATTGATGGATGAAGAGTATGCTGATAAAGCGGAAGTTGCTTCTTTCACAGATGATGATATTTCCTCCCACTCATCTCAGACAGTATCTTGTTCTCTACAAACAAGTCGTGGGCTGTCTCCTTCCAAAGATGAGTCTGGACAAGACAAAGTGCCTCATAACAATGAAGGAGATAATGCAAAGCATTCCTTAGCCTCAAATCTAGGGACTGAAAAATCAAGAACAATACCTCAGGGTGCACCACAAGAATATCTGAAGGGAAGTTCATCAGGCTCTTTATCAGTTGACTTGTCTTCTGACCTTGGAAGCCCGGTCAATGGTCATGCTTCTGTTACTTACTTTCATAGCTCTAGTTCCACAGCACTCATAAAAACTGGTGGTTCCCAGATTGTCTCTTCTTCTTCCTCATCCTCATCGAATGAAAATGCAGAGGAGTCAAACACCAGCATGAGAAGCAATGGCCATGCACATGCCCAGGAGGTAAACGAGGAGGTAAATGATGAGGTTGTCAATGGCAGAAGTAAAATTACTGCTGATATTCAACAGAGTAGCAAGGATGATGAGAAAGCTAATGAAATTGGCAGAGCATCCGTTGAGGCTGCTGCTGATGATGACAGAAACAAGAAGAAGATGGTGATGAAAGACAAAATTGTGATGAGGGGAACCATTCTGGGGAAGGCAGATACGATGAAGAGTGCAGGTGTTGCAGGAAACCTCAGAGTTAAGATAAGGAAAGAGGCTAAGGTGTATCCAAGAACAGAAGAACTGTCATTTTTGAAAGCAAGAACAATTATAAGCCAGGCTACTCGGGACCCTGAACTACCCAAGTCTGCCGTGTCTTCTATTGACAAAATTGGTGCTGAGAAAGTTAAACATAAGGCTTCATCTTCATTAAAATGGGAGGCTCCATCCTCTGGGAAAAAACAAGGGATGAAGCTATCGAATGGAAGTTCTGGTGACTGGGAGAACCCAAATACGTTTATGTCCTCACTGGAGAAGATTGAATCATGGATCTTCTCCCGAATAGTTGAACCTATCTGGTGGCAGACTTTGACACCACATATGCAGTCTGTTGCTGCAAAGGCAATTGATGAAAATATTGGTTCAGGGTCAGGAAAGAATTATAGAAGGACATCTAGTTCAGTTGATCAAGAGCAAAGTGACTTTTCATTAGACCTTTGGAAGAGGGCTTTCAGGGATGCTTGTGAAAGACTTTGTCCGGTAAGAGCTGGTAGGCATGAATGTGGCTGCTTGCCTGTGTTGTCTAGATTGGGCAGGGAGGATCCAATGCTGTTCCATTGCCTTCTGCTGAGGCTGAGCAGATGA

Protein Analysis

598

Amino Acids

65.52

Weight (kDa)

8.54

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1265
AarI CACCTGC 2 cut(s) 439, 1160
Acc36I ACCTGC 2 cut(s) 439, 1160
AccB7I CCANNNNNTGG 1 cut(s) 1385
AciI CCGC 2 cut(s) 89, 503
AclWI GGATC 3 cut(s) 1490, 1748, 1761
AcoI YGGCCR 2 cut(s) 86, 931
AcsI RAATTY 1 cut(s) 372
AcuI CTGAAG 2 cut(s) 206, 746
AfiI CCNNNNNNNGG 4 cut(s) 411, 788, 1143, 1385
AgsI TTSAA 5 cut(s) 205, 1013, 1249, 1475, 1502
AjnI CCWGG 2 cut(s) 945, 1269
AloI GAACNNNNNNTCC 2 cut(s) 1594, 1626
AluBI AGCT 7 cut(s) 275, 336, 420, 819, 1040, 1408, 1700
AluI AGCT 7 cut(s) 275, 336, 420, 819, 1040, 1408, 1700
Alw21I GWGCWC 2 cut(s) 316, 712
Alw26I GTCTC 2 cut(s) 594, 868
Alw44I GTGCAC 1 cut(s) 708
AlwI GGATC 3 cut(s) 1490, 1748, 1761
Ama87I CYCGRG 1 cut(s) 1278
AoxI GGCC 2 cut(s) 86, 931
ApaLI GTGCAC 1 cut(s) 708
ApeKI GCWGC 4 cut(s) 1070, 1073, 1547, 1719
ApoI RAATTY 1 cut(s) 372
AspS9I GGNCC 2 cut(s) 35, 1282
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 5 cut(s) 179, 185, 466, 1117, 1439
AvaI CYCGRG 1 cut(s) 1278
AvaII GGWCC 2 cut(s) 35, 1282
AxyI CCTNAGG 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 712
BalI TGGCCA 1 cut(s) 933
BamHI GGATCC 1 cut(s) 1753
BarI GAAGNNNNNNTAC 2 cut(s) 982, 1014
BbsI GAAGAC 2 cut(s) 756, 1302
Bbv12I GWGCWC 2 cut(s) 316, 712
BbvCI CCTCAGC 1 cut(s) 1781
BbvI GCAGC 4 cut(s) 1057, 1060, 1534, 1706
BccI CCATC 3 cut(s) 472, 1096, 1387
BceAI ACGGC 2 cut(s) 76, 1289
BciT130I CCWGG 2 cut(s) 947, 1271
BciVI GTATCC 1 cut(s) 1230
BclI TGATCA 1 cut(s) 1618
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 2 cut(s) 594, 868
BfaI CTAG 6 cut(s) 59, 411, 674, 822, 1608, 1737
BfuAI ACCTGC 2 cut(s) 439, 1160
BfuI GTATCC 1 cut(s) 1230
BisI GCNGC 5 cut(s) 89, 1071, 1074, 1548, 1720
BlpI GCTNAGC 1 cut(s) 1787
BlsI GCNGC 5 cut(s) 90, 1072, 1075, 1549, 1721
Bme1390I CCNGG 3 cut(s) 782, 947, 1271
Bme18I GGWCC 2 cut(s) 35, 1282
BmeT110I CYCGRG 1 cut(s) 1278
BmgT120I GGNCC 2 cut(s) 35, 1282
BmiI GGNNCC 6 cut(s) 853, 1135, 1283, 1284, 1377, 1755
BmrFI CCNGG 3 cut(s) 782, 947, 1271
BmrI ACTGGG 1 cut(s) 1441
BmsI GCATC 3 cut(s) 166, 1067, 1660
BmuI ACTGGG 1 cut(s) 1441
BpiI GAAGAC 2 cut(s) 756, 1302
BpmI CTGGAG 1 cut(s) 1484
Bpu10I CCTNAGC 3 cut(s) 661, 1212, 1781
Bpu1102I GCTNAGC 1 cut(s) 1787
BpuEI CTTGAG 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 782
BsaJI CCNNGG 4 cut(s) 83, 218, 772, 945
BsaWI WCCGGW 1 cut(s) 1690
Bsc4I CCNNNNNNNGG 4 cut(s) 411, 788, 1143, 1385
Bse1I ACTGG 4 cut(s) 443, 850, 1436, 1467
Bse21I CCTNAGG 1 cut(s) 702
Bse3DI GCAATG 2 cut(s) 934, 1768
BseBI CCWGG 2 cut(s) 947, 1271
BseDI CCNNGG 4 cut(s) 83, 218, 772, 945
BseGI GGATG 8 cut(s) 151, 487, 878, 1033, 1058, 1379, 1407, 1675
BseLI CCNNNNNNNGG 4 cut(s) 411, 788, 1143, 1385
BseMI GCAATG 2 cut(s) 934, 1768
BseMII CTCAG 7 cut(s) 131, 563, 716, 1201, 1323, 1772, 1778
BseNI ACTGG 4 cut(s) 443, 850, 1436, 1467
BseRI GAGGAG 3 cut(s) 346, 917, 974
BseSI GKGCMC 1 cut(s) 712
BseXI GCAGC 4 cut(s) 1057, 1060, 1534, 1706
BsgI GTGCAG 1 cut(s) 1188
BshFI GGCC 2 cut(s) 88, 933
BsiHKAI GWGCWC 2 cut(s) 316, 712
BsiHKCI CYCGRG 1 cut(s) 1278
BsiSI CCGG 2 cut(s) 782, 1691
BslFI GGGAC 2 cut(s) 691, 1295
BslI CCNNNNNNNGG 4 cut(s) 411, 788, 1143, 1385
BsmAI GTCTC 2 cut(s) 594, 868
BsmFI GGGAC 2 cut(s) 691, 1295
BsmI GAATGC 1 cut(s) 655
BsnI GGCC 2 cut(s) 88, 933
BsoBI CYCGRG 1 cut(s) 1278
Bsp1286I GDGCHC 2 cut(s) 316, 712
Bsp143I GATC 3 cut(s) 1482, 1618, 1753
Bsp1720I GCTNAGC 1 cut(s) 1787
BspACI CCGC 2 cut(s) 89, 503
BspANI GGCC 2 cut(s) 88, 933
BspCNI CTCAG 7 cut(s) 132, 562, 715, 1200, 1324, 1773, 1779
BspLI GGNNCC 6 cut(s) 853, 1135, 1283, 1284, 1377, 1755
BspMI ACCTGC 2 cut(s) 439, 1160
BspPI GGATC 3 cut(s) 1490, 1748, 1761
BsrDI GCAATG 2 cut(s) 934, 1768
BsrI ACTGG 4 cut(s) 443, 850, 1436, 1467
BssECI CCNNGG 4 cut(s) 83, 218, 772, 945
BssMI GATC 3 cut(s) 1482, 1618, 1753
BssT1I CCWWGG 2 cut(s) 83, 772
Bst2UI CCWGG 2 cut(s) 947, 1271
Bst4CI ACNGT 4 cut(s) 43, 326, 556, 1239
Bst6I CTCTTC 4 cut(s) 480, 871, 1157, 1649
BstAPI GCANNNNNTGC 1 cut(s) 1175
BstC8I GCNNGC 2 cut(s) 400, 1724
BstENI CCTNNNNNAGG 1 cut(s) 409
BstF5I GGATG 8 cut(s) 151, 487, 878, 1033, 1058, 1379, 1407, 1675
BstKTI GATC 3 cut(s) 1485, 1621, 1756
BstMAI GTCTC 2 cut(s) 594, 868
BstMBI GATC 3 cut(s) 1482, 1618, 1753
BstMWI GCNNNNNNNGC 6 cut(s) 88, 500, 509, 924, 1175, 1553
BstNI CCWGG 2 cut(s) 947, 1271
BstNSI RCATGY 1 cut(s) 944
BstSCI CCNGG 3 cut(s) 780, 945, 1269
BstSLI GKGCMC 1 cut(s) 712
BstV1I GCAGC 4 cut(s) 1057, 1060, 1534, 1706
BstV2I GAAGAC 2 cut(s) 756, 1302
BstX2I RGATCY 2 cut(s) 1482, 1753
BstYI RGATCY 2 cut(s) 1482, 1753
Bsu36I CCTNAGG 1 cut(s) 702
BsuI GTATCC 1 cut(s) 1230
BsuRI GGCC 2 cut(s) 88, 933
BtsCI GGATG 8 cut(s) 151, 487, 878, 1033, 1058, 1379, 1407, 1675
BtsIMutI CAGTG 2 cut(s) 436, 1460
BveI ACCTGC 2 cut(s) 439, 1160
Cac8I GCNNGC 2 cut(s) 400, 1724
Cfr13I GGNCC 2 cut(s) 35, 1282
CspCI CAANNNNNGTGG 2 cut(s) 432, 467
CviAII CATG 6 cut(s) 794, 919, 935, 941, 1479, 1709
DpnI GATC 3 cut(s) 1484, 1620, 1755
DpnII GATC 3 cut(s) 1482, 1618, 1753
EaeI YGGCCR 2 cut(s) 86, 931
Eam1104I CTCTTC 4 cut(s) 480, 871, 1157, 1649
EarI CTCTTC 4 cut(s) 480, 871, 1157, 1649
Eco130I CCWWGG 2 cut(s) 83, 772
Eco47I GGWCC 2 cut(s) 35, 1282
Eco57I CTGAAG 2 cut(s) 206, 746
Eco81I CCTNAGG 1 cut(s) 702
Eco88I CYCGRG 1 cut(s) 1278
EcoNI CCTNNNNNAGG 1 cut(s) 409
EcoO109I RGGNCCY 2 cut(s) 35, 1282
EcoRII CCWGG 2 cut(s) 945, 1269
EcoT14I CCWWGG 2 cut(s) 83, 772
EcoT22I ATGCAT 1 cut(s) 181
ErhI CCWWGG 2 cut(s) 83, 772
FaeI CATG 6 cut(s) 797, 922, 938, 944, 1482, 1712
FalI AAGNNNNNCTT 6 cut(s) 179, 211, 320, 352, 644, 676
FaqI GGGAC 2 cut(s) 691, 1295
FatI CATG 6 cut(s) 793, 918, 934, 940, 1478, 1708
FauNDI CATATG 1 cut(s) 1533
FbaI TGATCA 1 cut(s) 1618
Fnu4HI GCNGC 5 cut(s) 89, 1071, 1074, 1548, 1720
FokI GGATG 8 cut(s) 158, 494, 865, 1040, 1045, 1366, 1414, 1682
Fsp4HI GCNGC 5 cut(s) 89, 1071, 1074, 1548, 1720
FspBI CTAG 6 cut(s) 59, 411, 674, 822, 1608, 1737
GluI GCNGC 5 cut(s) 89, 1071, 1074, 1548, 1720
GsuI CTGGAG 1 cut(s) 1484
HaeIII GGCC 2 cut(s) 88, 933
HapII CCGG 2 cut(s) 782, 1691
Hin1II CATG 6 cut(s) 797, 922, 938, 944, 1482, 1712
HincII GTYRAC 1 cut(s) 757
HindII GTYRAC 1 cut(s) 757
HindIII AAGCTT 1 cut(s) 418
HinfI GANTC 4 cut(s) 461, 605, 905, 1475
HpaII CCGG 2 cut(s) 782, 1691
HphI GGTGA 5 cut(s) 179, 185, 466, 1117, 1439
Hpy166II GTNNAC 3 cut(s) 710, 757, 955
Hpy188I TCNGA 8 cut(s) 48, 186, 222, 318, 552, 726, 769, 1190
Hpy188III TCNNGA 9 cut(s) 71, 426, 609, 690, 1280, 1491, 1584, 1622, 1737
Hpy8I GTNNAC 3 cut(s) 710, 757, 955
HpyAV CCTTC 8 cut(s) 164, 382, 603, 632, 721, 1141, 1593, 1784
HpyCH4III ACNGT 4 cut(s) 43, 326, 556, 1239
HpyCH4IV ACGT 1 cut(s) 1448
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 500, 509, 924, 1175, 1553
HpySE526I ACGT 1 cut(s) 1448
Hsp92II CATG 6 cut(s) 797, 922, 938, 944, 1482, 1712
KflI GGGWCCC 1 cut(s) 1282
Ksp22I TGATCA 1 cut(s) 1618
Kzo9I GATC 3 cut(s) 1482, 1618, 1753
LmnI GCTCC 2 cut(s) 333, 1381
Lsp1109I GCAGC 4 cut(s) 1057, 1060, 1534, 1706
LweI GCATC 3 cut(s) 166, 1067, 1660
MaeI CTAG 6 cut(s) 59, 411, 674, 822, 1608, 1737
MaeII ACGT 1 cut(s) 1448
MaeIII GTNAC 6 cut(s) 93, 123, 130, 802, 1427, 1631
MalI GATC 3 cut(s) 1484, 1620, 1755
MboI GATC 3 cut(s) 1482, 1618, 1753
MfeI CAATTG 1 cut(s) 1557
MflI RGATCY 2 cut(s) 1482, 1753
MhlI GDGCHC 2 cut(s) 316, 712
MlsI TGGCCA 1 cut(s) 933
MluCI AATT 9 cut(s) 190, 372, 996, 1047, 1119, 1260, 1323, 1557, 1591
MluNI TGGCCA 1 cut(s) 933
MlyI GAGTC 2 cut(s) 614, 914
Mox20I TGGCCA 1 cut(s) 933
Mph1103I ATGCAT 1 cut(s) 181
MscI TGGCCA 1 cut(s) 933
MseI TTAA 8 cut(s) 14, 78, 120, 339, 383, 1194, 1341, 1364
MslI CAYNNNNRTG 5 cut(s) 633, 917, 939, 1366, 1713
Msp20I TGGCCA 1 cut(s) 933
MspI CCGG 2 cut(s) 782, 1691
MspR9I CCNGG 3 cut(s) 782, 947, 1271
MunI CAATTG 1 cut(s) 1557
Mva1269I GAATGC 1 cut(s) 655
MvaI CCWGG 2 cut(s) 947, 1271
MwoI GCNNNNNNNGC 6 cut(s) 88, 500, 509, 924, 1175, 1553
NciI CCSGG 1 cut(s) 782
NdeI CATATG 1 cut(s) 1533
NdeII GATC 3 cut(s) 1482, 1618, 1753
NlaIII CATG 6 cut(s) 797, 922, 938, 944, 1482, 1712
NlaIV GGNNCC 6 cut(s) 853, 1135, 1283, 1284, 1377, 1755
NmuCI GTSAC 4 cut(s) 93, 130, 1427, 1631
NsiI ATGCAT 1 cut(s) 181
NspI RCATGY 1 cut(s) 944
PaqCI CACCTGC 2 cut(s) 439, 1160
PctI GAATGC 1 cut(s) 655
PfeI GAWTC 2 cut(s) 461, 1475
PflFI GACNNNGTC 1 cut(s) 1686
PflMI CCANNNNNTGG 1 cut(s) 1385
PkrI GCNGC 5 cut(s) 90, 1072, 1075, 1549, 1721
PleI GAGTC 2 cut(s) 613, 913
PpsI GAGTC 2 cut(s) 613, 913
PpuMI RGGWCCY 2 cut(s) 35, 1282
PsiI TTATAA 1 cut(s) 1265
Psp5II RGGWCCY 2 cut(s) 35, 1282
Psp6I CCWGG 2 cut(s) 945, 1269
PspGI CCWGG 2 cut(s) 945, 1269
PspN4I GGNNCC 6 cut(s) 853, 1135, 1283, 1284, 1377, 1755
PspPI GGNCC 2 cut(s) 35, 1282
PspPPI RGGWCCY 2 cut(s) 35, 1282
PsuI RGATCY 2 cut(s) 1482, 1753
PsyI GACNNNGTC 1 cut(s) 1686
RseI CAYNNNNRTG 5 cut(s) 633, 917, 939, 1366, 1713
SaqAI TTAA 8 cut(s) 14, 78, 120, 339, 383, 1194, 1341, 1364
SatI GCNGC 5 cut(s) 89, 1071, 1074, 1548, 1720
Sau3AI GATC 3 cut(s) 1482, 1618, 1753
Sau96I GGNCC 2 cut(s) 35, 1282
SchI GAGTC 2 cut(s) 614, 914
ScrFI CCNGG 3 cut(s) 782, 947, 1271
SduI GDGCHC 2 cut(s) 316, 712
SfaNI GCATC 3 cut(s) 166, 1067, 1660
SinI GGWCC 2 cut(s) 35, 1282
SmiMI CAYNNNNRTG 5 cut(s) 633, 917, 939, 1366, 1713
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
Sse9I AATT 9 cut(s) 190, 372, 996, 1047, 1119, 1260, 1323, 1557, 1591
SsiI CCGC 2 cut(s) 89, 503
SspI AATATT 1 cut(s) 1570
SspMI CTAG 6 cut(s) 59, 411, 674, 822, 1608, 1737
StyD4I CCNGG 3 cut(s) 780, 945, 1269
StyI CCWWGG 2 cut(s) 83, 772
TaaI ACNGT 4 cut(s) 43, 326, 556, 1239
TaiI ACGT 1 cut(s) 1451
TaqI TCGA 2 cut(s) 887, 1412
TasI AATT 9 cut(s) 190, 372, 996, 1047, 1119, 1260, 1323, 1557, 1591
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 2 cut(s) 461, 1475
Tru1I TTAA 8 cut(s) 14, 78, 120, 339, 383, 1194, 1341, 1364
Tru9I TTAA 8 cut(s) 14, 78, 120, 339, 383, 1194, 1341, 1364
TscAI CASTG 2 cut(s) 443, 1467
TseFI GTSAC 4 cut(s) 93, 130, 1427, 1631
TseI GCWGC 4 cut(s) 1070, 1073, 1547, 1719
Tsp45I GTSAC 4 cut(s) 93, 130, 1427, 1631
TspGWI ACGGA 1 cut(s) 1051
TspRI CASTG 2 cut(s) 443, 1467
Tth111I GACNNNGTC 1 cut(s) 1686
Van91I CCANNNNNTGG 1 cut(s) 1385
VneI GTGCAC 1 cut(s) 708
VpaK11BI GGWCC 2 cut(s) 35, 1282
XagI CCTNNNNNAGG 1 cut(s) 409
XapI RAATTY 1 cut(s) 372
XbaI TCTAGA 1 cut(s) 1736
XceI RCATGY 1 cut(s) 944
XspI CTAG 6 cut(s) 59, 411, 674, 822, 1608, 1737
Zsp2I ATGCAT 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.