Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0004945

Physical Location & Seq

Genomic Coordinates Forward (+)

2986188 .. 2994245

Gene Structure 8058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG046100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGACAAGACAACCTTTTCTCTGCCACTCAGACCCACCTCAGGGTTAGATGGTACTGGGTGCGGACTCATTTTGCATCATAAAGCTCTTCAGAAGGTCTTTGAAGTTCGATGCTTGCATATTCCAGTTAACGATCGAACACCATTTGAAGGGCTGGTGAAATTGGTGGAAGAAACTATTAGGGTTGAGCATGCTTCATCTCCCAACAAGCCAATTTATTTGGTAGGAGATTCTTTTGGAGGATGCCTATCACTTGCCGTTGCTGCACGTAATCCTACCGTTGACCTAGTACTGATACTAATCAACCCAGCAACATCCATCGAGAGGTCTCAGTTGCTACCTCTGTTCCCAATCTTGGAGGCTATGCCTGAAGAATTACATATCACAGTTCCCTATCTTCTCAGCTTTGTTATGGGTGATCCAATAAAAATGGCGACGGTTAACATAAAAAATAGGCTTCCTCCCGGTTTGAAATTTACGCAAATATCGCAGAACCTCACTGCTTTGCTACCATGTCTCTCTTCTTTGGCCGATATTATACCAAGGGAAACTCTTCTTTGGAAGTTGAAGCTGCTCAGATCAGCTGCTGGTTATGCAAATTCCCGTCTTCATGCTGTTAAAGCTGAAGTACTTGTGTTGGCTAGTGACAAGGATAACATGGTTCCTAGTGGGGATGAAGCGGAACGACTAAGGAACTCATTACAGAACTGTTCAATTCGTCACTTCCCAGACAATGGGCATACCCTATTACTGGAAGATGGGGTTAATTTGTTGACAGTTATAAAACGTACTCTCAAATATCGCCGTTCGAGGAAGCATGATAGTGTCTCAGATTTCCTTCCTCCTAGTATGACAGAATTCAACTATGTATTTGATGAAACAGTCGGATTGTTACGCTTTGCTGCTGGTTCTGCTTTTTTCTCAACATTGGAAGATGGAACGGTAGTGAGAGGTCTTGCAGGAGTTCCAATTGAAGGACCTGTCTTAATTGTTGGCTATCATAATTTAATGGGGCTAGAAATGTATTCTTTAGTTGAAGAATTTTTAAGAGAAAAGAAAATAATGGTTCATGGTTTAGCGCATCCAGAACTGTTGTTGGGGAAGAGCTCAGCTGATTTTGACTTGCTCAACTTATTTGGTGCATTACCTGTTACGGCAAGAAATCTATTCAAAGCACTTTCATCAAACTCACATGTTCTCTTGTATCCTGGTGGTGCACGTGAAGCTCTCCATTACAAGGGTGAAGAATACAAGTTATTCTGGCCTGATCAACCTGAATTTGTCAGAATGGCTGCACGTTTTGGGGCCACAATTGTACCATTTGCAGCTGTAGGAGAAGATGACTTACTCGAATTGGTTCTCGACTACAATGACATAAAGAAGATCCCTGTGGTGGGCGACTATTTCATCAATGCTAATAATGATGCTATAAAATTGAGGGAGGACACACCTGGAGAAGTTGCCAACCAAGACCTCTTCTTTCCGGGAGTTCTGCCCAAGTTACCAGGCCGCTATTACCATTTGTTTGGGAAACCGATAGTAACAAAAGGAAGGGAAGAGATCTTGAAAGACAAAGACAATGCAAACAAATTGTATTTGGAGATACAATCTGAAATTGAACGAAGTTTAGCATACTTAACCAAGAAACGAGAGGAGGATCCTTACAGGAATCTTATTGACAGAACAGTATATCGGGCACTATATTCCCGTTTAGATGAAATTCCAACATTTGAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DAGAT Hydrolase_4

Protein Analysis

579

Amino Acids

64.75

Weight (kDa)

6.15

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	59 - 252	1.1e-09	Serine aminopeptidase, S33
DAGAT	PF03982	378 - 453	8.2e-07	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54570
fragaria_vesca	FvH4_6g03990 FvH4_6g04000
malus_domestica	MD04G1216900.v1.1 MD12G1233500.v1.1
prunus_persica	Prupe.6G336800_v2.0.a1 Prupe.6G336800_v2.0.a1 Prupe.6G336800_v2.0.a1 Prupe.6G336800_v2.0.a1
pyrus_communis	pycom04g19300 pycom12g21610
rosa_chinensis	RchiOBHm_Chr3g0452581
rosa_laevigata	RLG00000014771 RLG00000025582
rosa_multiflora	Rmu_co8485569.1_g000001 Rmu_sc0004414.1_g000004 Rmu_sc0028651.1_g000001 Rmu_sc0032164.1_g000001
rosa_roxburghii	Rroxscaffold_6G00429620 Rroxscaffold_7G00209280 Rroxscaffold_7G00209300
rosa_rugosa	Rorug02G0641400 Rorug02G0641500 Rorug02G0641500
rosa_samantha	Rh3AG044000 Rh3BG046100 Rh3CG044800 Rh3DG045100
rosa_wichuraiana	Rw3G003410 Rw6G007390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	782
AccB7I	CCANNNNNTGG	1 cut(s)	734
AciI	CCGC	3 cut(s)	63, 680, 1510
AclWI	GGATC	4 cut(s)	413, 1378, 1652, 1665
AcoI	YGGCCR	1 cut(s)	528
AcsI	RAATTY	6 cut(s)	473, 598, 857, 1040, 1277, 1719
AcuI	CTGAAG	3 cut(s)	74, 390, 645
AcvI	CACGTG	1 cut(s)	1220
AfaI	GTAC	5 cut(s)	55, 291, 630, 790, 1317
AflIII	ACRYGT	1 cut(s)	1192
AjnI	CCWGG	3 cut(s)	1207, 1450, 1504
AluBI	AGCT	9 cut(s)	86, 405, 571, 584, 623, 1107, 1112, 1226, 1328
AluI	AGCT	9 cut(s)	86, 405, 571, 584, 623, 1107, 1112, 1226, 1328
Alw21I	GWGCWC	2 cut(s)	1109, 1219
Alw26I	GTCTC	3 cut(s)	333, 521, 832
Alw44I	GTGCAC	1 cut(s)	1215
AlwI	GGATC	4 cut(s)	413, 1378, 1652, 1665
AlwNI	CAGNNNCTG	1 cut(s)	587
AoxI	GGCC	4 cut(s)	528, 1262, 1305, 1507
ApaLI	GTGCAC	1 cut(s)	1215
ApeKI	GCWGC	6 cut(s)	263, 571, 584, 902, 1292, 1325
ApoI	RAATTY	6 cut(s)	473, 598, 857, 1040, 1277, 1719
Asp700I	GAANNNNTTC	2 cut(s)	552, 1356
AspLEI	GCGC	1 cut(s)	1081
AspS9I	GGNCC	2 cut(s)	977, 1305
AsuC2I	CCSGG	2 cut(s)	465, 1485
AsuHPI	GGTGA	3 cut(s)	169, 428, 1253
AvaII	GGWCC	1 cut(s)	977
AxyI	CCTNAGG	1 cut(s)	40
BaeGI	GKGCMC	2 cut(s)	1219, 1699
BaeI	ACNNNNGTAYC	2 cut(s)	1299, 1332
BamHI	GGATCC	1 cut(s)	1657
BanII	GRGCYC	1 cut(s)	1109
BarI	GAAGNNNNNNTAC	2 cut(s)	1329, 1361
BbrPI	CACGTG	1 cut(s)	1220
BbsI	GAAGAC	1 cut(s)	599
Bbv12I	GWGCWC	2 cut(s)	1109, 1219
BbvI	GCAGC	6 cut(s)	250, 558, 571, 889, 1279, 1337
BccI	CCATC	4 cut(s)	44, 326, 752, 929
BceAI	ACGGC	3 cut(s)	242, 789, 1170
BciT130I	CCWGG	3 cut(s)	1209, 1452, 1506
BciVI	GTATCC	1 cut(s)	1215
BclI	TGATCA	1 cut(s)	1267
BcnI	CCSGG	2 cut(s)	465, 1485
BcoDI	GTCTC	3 cut(s)	333, 521, 832
BfaI	CTAG	5 cut(s)	287, 642, 666, 846, 1016
BfmI	CTRYAG	1 cut(s)	1329
BfuI	GTATCC	1 cut(s)	1215
BglII	AGATCT	1 cut(s)	1560
BisI	GCNGC	7 cut(s)	264, 572, 585, 903, 1293, 1326, 1510
BlpI	GCTNAGC	1 cut(s)	1108
BlsI	GCNGC	7 cut(s)	265, 573, 586, 904, 1294, 1327, 1511
BmcAI	AGTACT	2 cut(s)	291, 630
Bme1390I	CCNGG	5 cut(s)	465, 1209, 1452, 1485, 1506
Bme18I	GGWCC	1 cut(s)	977
BmgT120I	GGNCC	2 cut(s)	977, 1305
BmiI	GGNNCC	3 cut(s)	663, 1306, 1659
BmrFI	CCNGG	5 cut(s)	465, 1209, 1452, 1485, 1506
BmrI	ACTGGG	1 cut(s)	66
BmsI	GCATC	5 cut(s)	85, 101, 233, 1090, 1414
BmuI	ACTGGG	1 cut(s)	66
BpiI	GAAGAC	1 cut(s)	599
BpmI	CTGGAG	1 cut(s)	1473
Bpu1102I	GCTNAGC	1 cut(s)	1108
BpuMI	CCSGG	2 cut(s)	465, 1485
BsaAI	YACGTR	2 cut(s)	269, 1220
BsaBI	GATNNNNATC	2 cut(s)	247, 299
BsaI	GGTCTC	1 cut(s)	333
BsaJI	CCNNGG	1 cut(s)	542
Bse1I	ACTGG	3 cut(s)	61, 125, 756
Bse21I	CCTNAGG	1 cut(s)	40
Bse8I	GATNNNNATC	2 cut(s)	247, 299
BseBI	CCWGG	3 cut(s)	1209, 1452, 1506
BseDI	CCNNGG	1 cut(s)	542
BseGI	GGATG	4 cut(s)	248, 314, 679, 1081
BseJI	GATNNNNATC	2 cut(s)	247, 299
BseMII	CTCAG	7 cut(s)	43, 54, 344, 415, 589, 843, 1122
BseNI	ACTGG	3 cut(s)	61, 125, 756
BseRI	GAGGAG	1 cut(s)	1667
BseSI	GKGCMC	2 cut(s)	1219, 1699
BseXI	GCAGC	6 cut(s)	250, 558, 571, 889, 1279, 1337
BseYI	CCCAGC	1 cut(s)	307
BsgI	GTGCAG	2 cut(s)	249, 1278
Bsh1285I	CGRYCG	1 cut(s)	136
BshFI	GGCC	4 cut(s)	530, 1264, 1307, 1509
BsiEI	CGRYCG	1 cut(s)	136
BsiHKAI	GWGCWC	2 cut(s)	1109, 1219
BsiSI	CCGG	2 cut(s)	465, 1484
BsmAI	GTCTC	3 cut(s)	333, 521, 832
BsnI	GGCC	4 cut(s)	530, 1264, 1307, 1509
Bso31I	GGTCTC	1 cut(s)	333
Bsp1286I	GDGCHC	3 cut(s)	1109, 1219, 1699
Bsp143I	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
Bsp1720I	GCTNAGC	1 cut(s)	1108
BspACI	CCGC	3 cut(s)	63, 680, 1510
BspANI	GGCC	4 cut(s)	530, 1264, 1307, 1509
BspCNI	CTCAG	7 cut(s)	42, 53, 343, 414, 588, 842, 1121
BspLI	GGNNCC	3 cut(s)	663, 1306, 1659
BspPI	GGATC	4 cut(s)	413, 1378, 1652, 1665
BspQI	GCTCTTC	2 cut(s)	93, 1097
BspTNI	GGTCTC	1 cut(s)	333
BsrI	ACTGG	3 cut(s)	61, 125, 756
BssECI	CCNNGG	1 cut(s)	542
BssMI	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
BssT1I	CCWWGG	1 cut(s)	542
Bst2UI	CCWGG	3 cut(s)	1209, 1452, 1506
Bst4CI	ACNGT	9 cut(s)	280, 388, 439, 710, 778, 883, 943, 1092, 1687
Bst6I	CTCTTC	6 cut(s)	93, 526, 558, 1097, 1481, 1551
BstBAI	YACGTR	2 cut(s)	269, 1220
BstC8I	GCNNGC	2 cut(s)	116, 192
BstDEI	CTNAG	8 cut(s)	29, 40, 330, 401, 575, 689, 829, 1108
BstF5I	GGATG	4 cut(s)	248, 314, 679, 1081
BstHHI	GCGC	1 cut(s)	1081
BstKTI	GATC	7 cut(s)	136, 421, 581, 1270, 1386, 1563, 1660
BstMAI	GTCTC	3 cut(s)	333, 521, 832
BstMBI	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
BstMCI	CGRYCG	1 cut(s)	136
BstMWI	GCNNNNNNNGC	6 cut(s)	263, 487, 593, 620, 911, 1223
BstNI	CCWGG	3 cut(s)	1209, 1452, 1506
BstNSI	RCATGY	2 cut(s)	194, 1196
BstSCI	CCNGG	5 cut(s)	463, 1207, 1450, 1483, 1504
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	2 cut(s)	1219, 1699
BstV1I	GCAGC	6 cut(s)	250, 558, 571, 889, 1279, 1337
BstV2I	GAAGAC	1 cut(s)	599
BstX2I	RGATCY	3 cut(s)	1383, 1560, 1657
BstXI	CCANNNNNNTGG	1 cut(s)	1526
BstYI	RGATCY	3 cut(s)	1383, 1560, 1657
Bsu36I	CCTNAGG	1 cut(s)	40
BsuI	GTATCC	1 cut(s)	1215
BsuRI	GGCC	4 cut(s)	530, 1264, 1307, 1509
BtsCI	GGATG	4 cut(s)	248, 314, 679, 1081
BtsI	GCAGTG	1 cut(s)	498
BtsIMutI	CAGTG	1 cut(s)	498
Cac8I	GCNNGC	2 cut(s)	116, 192
CaiI	CAGNNNCTG	1 cut(s)	587
CfoI	GCGC	1 cut(s)	1081
Cfr13I	GGNCC	2 cut(s)	977, 1305
Csp6I	GTAC	5 cut(s)	54, 290, 629, 789, 1316
CviAII	CATG	7 cut(s)	191, 513, 611, 658, 818, 1070, 1193
CviQI	GTAC	5 cut(s)	54, 290, 629, 789, 1316
DdeI	CTNAG	8 cut(s)	29, 40, 330, 401, 575, 689, 829, 1108
DpnI	GATC	7 cut(s)	135, 420, 580, 1269, 1385, 1562, 1659
DpnII	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
EaeI	YGGCCR	1 cut(s)	528
Eam1104I	CTCTTC	6 cut(s)	93, 526, 558, 1097, 1481, 1551
EarI	CTCTTC	6 cut(s)	93, 526, 558, 1097, 1481, 1551
Ecl136II	GAGCTC	1 cut(s)	1107
Eco130I	CCWWGG	1 cut(s)	542
Eco24I	GRGCYC	1 cut(s)	1109
Eco31I	GGTCTC	1 cut(s)	333
Eco47I	GGWCC	1 cut(s)	977
Eco53kI	GAGCTC	1 cut(s)	1107
Eco57I	CTGAAG	3 cut(s)	74, 390, 645
Eco72I	CACGTG	1 cut(s)	1220
Eco81I	CCTNAGG	1 cut(s)	40
EcoICRI	GAGCTC	1 cut(s)	1107
EcoO109I	RGGNCCY	1 cut(s)	977
EcoRI	GAATTC	1 cut(s)	857
EcoRII	CCWGG	3 cut(s)	1207, 1450, 1504
EcoT14I	CCWWGG	1 cut(s)	542
EcoT38I	GRGCYC	1 cut(s)	1109
ErhI	CCWWGG	1 cut(s)	542
FaeI	CATG	7 cut(s)	194, 516, 614, 661, 821, 1073, 1196
FalI	AAGNNNNNCTT	1 cut(s)	31
FatI	CATG	7 cut(s)	190, 512, 610, 657, 817, 1069, 1192
FbaI	TGATCA	1 cut(s)	1267
Fnu4HI	GCNGC	7 cut(s)	264, 572, 585, 903, 1293, 1326, 1510
FokI	GGATG	4 cut(s)	255, 301, 686, 1068
FriOI	GRGCYC	1 cut(s)	1109
Fsp4HI	GCNGC	7 cut(s)	264, 572, 585, 903, 1293, 1326, 1510
FspBI	CTAG	5 cut(s)	287, 642, 666, 846, 1016
GlaI	GCGC	1 cut(s)	1080
GluI	GCNGC	7 cut(s)	264, 572, 585, 903, 1293, 1326, 1510
GsaI	CCCAGC	1 cut(s)	311
GsuI	CTGGAG	1 cut(s)	1473
HaeIII	GGCC	4 cut(s)	530, 1264, 1307, 1509
HapII	CCGG	2 cut(s)	465, 1484
HhaI	GCGC	1 cut(s)	1081
Hin1II	CATG	7 cut(s)	194, 516, 614, 661, 821, 1073, 1196
Hin6I	GCGC	1 cut(s)	1079
HinP1I	GCGC	1 cut(s)	1079
HincII	GTYRAC	4 cut(s)	130, 283, 442, 774
HindII	GTYRAC	4 cut(s)	130, 283, 442, 774
HinfI	GANTC	3 cut(s)	66, 230, 1669
HpaI	GTTAAC	2 cut(s)	130, 442
HpaII	CCGG	2 cut(s)	465, 1484
HphI	GGTGA	3 cut(s)	169, 428, 1253
Hpy166II	GTNNAC	5 cut(s)	130, 283, 442, 774, 1217
Hpy188I	TCNGA	7 cut(s)	32, 93, 578, 832, 887, 1286, 1612
Hpy188III	TCNNGA	4 cut(s)	322, 1085, 1361, 1564
Hpy8I	GTNNAC	5 cut(s)	130, 283, 442, 774, 1217
Hpy99I	CGWCG	1 cut(s)	439
HpyAV	CCTTC	5 cut(s)	88, 143, 848, 968, 1545
HpyCH4III	ACNGT	9 cut(s)	280, 388, 439, 710, 778, 883, 943, 1092, 1687
HpyCH4IV	ACGT	4 cut(s)	268, 787, 1219, 1297
HpyF10VI	GCNNNNNNNGC	6 cut(s)	263, 487, 593, 620, 911, 1223
HpyF3I	CTNAG	8 cut(s)	29, 40, 330, 401, 575, 689, 829, 1108
HpySE526I	ACGT	4 cut(s)	268, 787, 1219, 1297
Hsp92II	CATG	7 cut(s)	194, 516, 614, 661, 821, 1073, 1196
HspAI	GCGC	1 cut(s)	1079
Ksp22I	TGATCA	1 cut(s)	1267
KspAI	GTTAAC	2 cut(s)	130, 442
Kzo9I	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
LguI	GCTCTTC	2 cut(s)	93, 1097
Lsp1109I	GCAGC	6 cut(s)	250, 558, 571, 889, 1279, 1337
LweI	GCATC	5 cut(s)	85, 101, 233, 1090, 1414
MaeI	CTAG	5 cut(s)	287, 642, 666, 846, 1016
MaeII	ACGT	4 cut(s)	268, 787, 1219, 1297
MaeIII	GTNAC	6 cut(s)	644, 719, 891, 1150, 1500, 1540
MalI	GATC	7 cut(s)	135, 420, 580, 1269, 1385, 1562, 1659
MboI	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
MfeI	CAATTG	2 cut(s)	969, 1311
MflI	RGATCY	3 cut(s)	1383, 1560, 1657
MhlI	GDGCHC	3 cut(s)	1109, 1219, 1699
MlyI	GAGTC	1 cut(s)	60
MmeI	TCCRAC	1 cut(s)	865
MroXI	GAANNNNTTC	2 cut(s)	552, 1356
MseI	TTAA	8 cut(s)	129, 441, 618, 765, 986, 1007, 1046, 1637
MslI	CAYNNNNRTG	1 cut(s)	822
MspA1I	CMGCKG	3 cut(s)	584, 1112, 1328
MspI	CCGG	2 cut(s)	465, 1484
MspR9I	CCNGG	5 cut(s)	465, 1209, 1452, 1485, 1506
MunI	CAATTG	2 cut(s)	969, 1311
MvaI	CCWGG	3 cut(s)	1209, 1452, 1506
MwoI	GCNNNNNNNGC	6 cut(s)	263, 487, 593, 620, 911, 1223
NciI	CCSGG	2 cut(s)	465, 1485
NdeII	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
NlaIII	CATG	7 cut(s)	194, 516, 614, 661, 821, 1073, 1196
NlaIV	GGNNCC	3 cut(s)	663, 1306, 1659
NmuCI	GTSAC	2 cut(s)	644, 719
NspI	RCATGY	2 cut(s)	194, 1196
PaeI	GCATGC	1 cut(s)	194
PciI	ACATGT	1 cut(s)	1192
PciSI	GCTCTTC	2 cut(s)	93, 1097
PdmI	GAANNNNTTC	2 cut(s)	552, 1356
PfeI	GAWTC	2 cut(s)	230, 1669
PflMI	CCANNNNNTGG	1 cut(s)	734
PfoI	TCCNGGA	1 cut(s)	1483
PkrI	GCNGC	7 cut(s)	265, 573, 586, 904, 1294, 1327, 1511
Ple19I	CGATCG	1 cut(s)	136
PleI	GAGTC	1 cut(s)	60
PmaCI	CACGTG	1 cut(s)	1220
PmlI	CACGTG	1 cut(s)	1220
PpsI	GAGTC	1 cut(s)	60
Ppu21I	YACGTR	2 cut(s)	269, 1220
PpuMI	RGGWCCY	1 cut(s)	977
PscI	ACATGT	1 cut(s)	1192
PsiI	TTATAA	1 cut(s)	782
Psp124BI	GAGCTC	1 cut(s)	1109
Psp5II	RGGWCCY	1 cut(s)	977
Psp6I	CCWGG	3 cut(s)	1207, 1450, 1504
PspCI	CACGTG	1 cut(s)	1220
PspFI	CCCAGC	1 cut(s)	307
PspGI	CCWGG	3 cut(s)	1207, 1450, 1504
PspN4I	GGNNCC	3 cut(s)	663, 1306, 1659
PspPI	GGNCC	2 cut(s)	977, 1305
PspPPI	RGGWCCY	1 cut(s)	977
PstNI	CAGNNNCTG	1 cut(s)	587
PsuI	RGATCY	3 cut(s)	1383, 1560, 1657
PvuI	CGATCG	1 cut(s)	136
PvuII	CAGCTG	3 cut(s)	584, 1112, 1328
RsaI	GTAC	5 cut(s)	55, 291, 630, 790, 1317
RsaNI	GTAC	5 cut(s)	54, 290, 629, 789, 1316
RseI	CAYNNNNRTG	1 cut(s)	822
SacI	GAGCTC	1 cut(s)	1109
SapI	GCTCTTC	2 cut(s)	93, 1097
SaqAI	TTAA	8 cut(s)	129, 441, 618, 765, 986, 1007, 1046, 1637
SatI	GCNGC	7 cut(s)	264, 572, 585, 903, 1293, 1326, 1510
Sau3AI	GATC	7 cut(s)	133, 418, 578, 1267, 1383, 1560, 1657
Sau96I	GGNCC	2 cut(s)	977, 1305
ScaI	AGTACT	2 cut(s)	291, 630
SchI	GAGTC	1 cut(s)	60
ScrFI	CCNGG	5 cut(s)	465, 1209, 1452, 1485, 1506
SduI	GDGCHC	3 cut(s)	1109, 1219, 1699
SfaNI	GCATC	5 cut(s)	85, 101, 233, 1090, 1414
SfcI	CTRYAG	1 cut(s)	1329
SinI	GGWCC	1 cut(s)	977
SmiMI	CAYNNNNRTG	1 cut(s)	822
SphI	GCATGC	1 cut(s)	194
SsiI	CCGC	3 cut(s)	63, 680, 1510
SspMI	CTAG	5 cut(s)	287, 642, 666, 846, 1016
SstI	GAGCTC	1 cut(s)	1109
StyD4I	CCNGG	5 cut(s)	463, 1207, 1450, 1483, 1504
StyI	CCWWGG	1 cut(s)	542
TaaI	ACNGT	9 cut(s)	280, 388, 439, 710, 778, 883, 943, 1092, 1687
TaiI	ACGT	4 cut(s)	271, 790, 1222, 1300
TaqI	TCGA	6 cut(s)	109, 136, 321, 809, 1350, 1362
TatI	WGTACW	2 cut(s)	289, 628
TauI	GCSGC	1 cut(s)	1512
TfiI	GAWTC	2 cut(s)	230, 1669
Tru1I	TTAA	8 cut(s)	129, 441, 618, 765, 986, 1007, 1046, 1637
Tru9I	TTAA	8 cut(s)	129, 441, 618, 765, 986, 1007, 1046, 1637
TscAI	CASTG	1 cut(s)	505
TseFI	GTSAC	2 cut(s)	644, 719
TseI	GCWGC	6 cut(s)	263, 571, 584, 902, 1292, 1325
Tsp45I	GTSAC	2 cut(s)	644, 719
TspDTI	ATGAA	8 cut(s)	186, 599, 690, 891, 1058, 1170, 1396, 1731
TspRI	CASTG	1 cut(s)	505
Van91I	CCANNNNNTGG	1 cut(s)	734
VneI	GTGCAC	1 cut(s)	1215
VpaK11BI	GGWCC	1 cut(s)	977
XapI	RAATTY	6 cut(s)	473, 598, 857, 1040, 1277, 1719
XceI	RCATGY	2 cut(s)	194, 1196
XmnI	GAANNNNTTC	2 cut(s)	552, 1356
XspI	CTAG	5 cut(s)	287, 642, 666, 846, 1016
ZrmI	AGTACT	2 cut(s)	291, 630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.