Ribosomal S17
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G05220 AT2G05220 AT3G10610 AT5G04800 AT5G04800 AT5G04800 AT5G04800 |
| fragaria_vesca | FvH4_2g13900 FvH4_6g19760 |
| malus_domestica | MD08G1190300.v1.1 MD12G1032900.v1.1 MD14G1033700.v1.1 |
| prunus_persica | Prupe.2G071300_v2.0.a1 Prupe.2G071300_v2.0.a1 Prupe.7G099300_v2.0.a1 |
| pyrus_communis | pycom08g16350 |
| rosa_chinensis | RchiOBHm_Chr3g0475121 RchiOBHm_Chr3g0492591 |
| rosa_laevigata | RLG00000022756 RLG00000023862 |
| rosa_multiflora | Rmu_sc0000831.1_g000043 Rmu_sc0003093.1_g000025 Rmu_sc0007491.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00392180 Rroxscaffold_6G00406550 |
| rosa_rugosa | Rorug03G0146800 Rorug03G0254900 Rorug03G0255000 |
| rosa_samantha | Rh3AG196600 Rh3AG305200 Rh3BG226600 Rh3BG341400 Rh3DG222100 Rh3DG340800 |
| rosa_wichuraiana | Rw3G017890 Rw3G026870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 179 |
| AccB1I | GGYRCC | 1 cut(s) | 262 |
| AclWI | GGATC | 2 cut(s) | 414, 452 |
| AcsI | RAATTY | 1 cut(s) | 308 |
| AdeI | CACNNNGTG | 1 cut(s) | 160 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 273, 274 |
| AgsI | TTSAA | 4 cut(s) | 104, 323, 406, 565 |
| AjiI | CACGTC | 2 cut(s) | 250, 371 |
| Alw26I | GTCTC | 1 cut(s) | 157 |
| AlwI | GGATC | 2 cut(s) | 414, 452 |
| ApeKI | GCWGC | 1 cut(s) | 491 |
| ApoI | RAATTY | 1 cut(s) | 308 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| BaeGI | GKGCMC | 2 cut(s) | 267, 376 |
| BanI | GGYRCC | 1 cut(s) | 262 |
| BauI | CACGAG | 1 cut(s) | 395 |
| BbvI | GCAGC | 1 cut(s) | 503 |
| BccI | CCATC | 2 cut(s) | 330, 569 |
| BceAI | ACGGC | 1 cut(s) | 480 |
| BciVI | GTATCC | 1 cut(s) | 311 |
| BcoDI | GTCTC | 1 cut(s) | 157 |
| BfuI | GTATCC | 1 cut(s) | 311 |
| BglII | AGATCT | 1 cut(s) | 115 |
| BisI | GCNGC | 1 cut(s) | 492 |
| BlsI | GCNGC | 1 cut(s) | 493 |
| BmgBI | CACGTC | 2 cut(s) | 250, 371 |
| BmiI | GGNNCC | 1 cut(s) | 264 |
| BmsI | GCATC | 1 cut(s) | 503 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 102, 134 |
| BpuEI | CTTGAG | 1 cut(s) | 314 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 273, 274 |
| Bse1I | ACTGG | 2 cut(s) | 370, 519 |
| Bse3DI | GCAATG | 1 cut(s) | 586 |
| BseGI | GGATG | 2 cut(s) | 80, 341 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 273, 274 |
| BseMI | GCAATG | 1 cut(s) | 586 |
| BseMII | CTCAG | 1 cut(s) | 261 |
| BseNI | ACTGG | 2 cut(s) | 370, 519 |
| BseSI | GKGCMC | 2 cut(s) | 267, 376 |
| BseXI | GCAGC | 1 cut(s) | 503 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| BshNI | GGYRCC | 1 cut(s) | 262 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 273, 274 |
| BsmAI | GTCTC | 1 cut(s) | 157 |
| BsmI | GAATGC | 2 cut(s) | 79, 142 |
| Bsp1286I | GDGCHC | 2 cut(s) | 267, 376 |
| Bsp143I | GATC | 3 cut(s) | 115, 419, 457 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspLI | GGNNCC | 1 cut(s) | 264 |
| BspPI | GGATC | 2 cut(s) | 414, 452 |
| BspT107I | GGYRCC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 586 |
| BsrI | ACTGG | 2 cut(s) | 370, 519 |
| BssMI | GATC | 3 cut(s) | 115, 419, 457 |
| BssSI | CACGAG | 1 cut(s) | 395 |
| Bst2BI | CACGAG | 1 cut(s) | 395 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| Bst6I | CTCTTC | 1 cut(s) | 240 |
| BstDEI | CTNAG | 1 cut(s) | 270 |
| BstF5I | GGATG | 2 cut(s) | 80, 341 |
| BstKTI | GATC | 3 cut(s) | 118, 422, 460 |
| BstMAI | GTCTC | 1 cut(s) | 157 |
| BstMBI | GATC | 3 cut(s) | 115, 419, 457 |
| BstSLI | GKGCMC | 2 cut(s) | 267, 376 |
| BstV1I | GCAGC | 1 cut(s) | 503 |
| BstX2I | RGATCY | 2 cut(s) | 115, 457 |
| BstYI | RGATCY | 2 cut(s) | 115, 457 |
| BsuI | GTATCC | 1 cut(s) | 311 |
| BtrI | CACGTC | 2 cut(s) | 250, 371 |
| BtsCI | GGATG | 2 cut(s) | 80, 341 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviJI | RGCY | 3 cut(s) | 5, 328, 467 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 328, 467 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 1 cut(s) | 270 |
| DpnI | GATC | 3 cut(s) | 117, 421, 459 |
| DpnII | GATC | 3 cut(s) | 115, 419, 457 |
| DraIII | CACNNNGTG | 1 cut(s) | 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 240 |
| EarI | CTCTTC | 1 cut(s) | 240 |
| FaiI | YATR | 5 cut(s) | 179, 428, 453, 593, 595 |
| Fnu4HI | GCNGC | 1 cut(s) | 492 |
| FokI | GGATG | 2 cut(s) | 67, 348 |
| Fsp4HI | GCNGC | 1 cut(s) | 492 |
| GluI | GCNGC | 1 cut(s) | 492 |
| HincII | GTYRAC | 1 cut(s) | 535 |
| HindII | GTYRAC | 1 cut(s) | 535 |
| HinfI | GANTC | 6 cut(s) | 86, 104, 128, 380, 515, 531 |
| HphI | GGTGA | 1 cut(s) | 38 |
| Hpy166II | GTNNAC | 1 cut(s) | 535 |
| Hpy188I | TCNGA | 3 cut(s) | 85, 243, 478 |
| Hpy188III | TCNNGA | 2 cut(s) | 108, 395 |
| Hpy8I | GTNNAC | 1 cut(s) | 535 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| HpyCH4IV | ACGT | 3 cut(s) | 249, 370, 537 |
| HpyCH4V | TGCA | 2 cut(s) | 23, 40 |
| HpyF3I | CTNAG | 1 cut(s) | 270 |
| HpySE526I | ACGT | 3 cut(s) | 249, 370, 537 |
| Kzo9I | GATC | 3 cut(s) | 115, 419, 457 |
| LmnI | GCTCC | 1 cut(s) | 110 |
| LpnPI | CCDG | 8 cut(s) | 3, 93, 110, 201, 234, 282, 351, 532 |
| Lsp1109I | GCAGC | 1 cut(s) | 503 |
| LweI | GCATC | 1 cut(s) | 503 |
| MaeII | ACGT | 3 cut(s) | 249, 370, 537 |
| MaeIII | GTNAC | 3 cut(s) | 30, 280, 521 |
| MalI | GATC | 3 cut(s) | 117, 421, 459 |
| MboI | GATC | 3 cut(s) | 115, 419, 457 |
| MboII | GAAGA | 4 cut(s) | 106, 227, 467, 524 |
| MflI | RGATCY | 2 cut(s) | 115, 457 |
| MhlI | GDGCHC | 2 cut(s) | 267, 376 |
| MluCI | AATT | 2 cut(s) | 308, 584 |
| MlyI | GAGTC | 3 cut(s) | 95, 374, 540 |
| MmeI | TCCRAC | 3 cut(s) | 123, 238, 485 |
| MnlI | CCTC | 8 cut(s) | 139, 243, 267, 340, 386, 424, 458, 550 |
| MseI | TTAA | 1 cut(s) | 587 |
| Mva1269I | GAATGC | 2 cut(s) | 79, 142 |
| NdeII | GATC | 3 cut(s) | 115, 419, 457 |
| NlaIV | GGNNCC | 1 cut(s) | 264 |
| PctI | GAATGC | 2 cut(s) | 79, 142 |
| PfeI | GAWTC | 3 cut(s) | 104, 128, 515 |
| PkrI | GCNGC | 1 cut(s) | 493 |
| PleI | GAGTC | 3 cut(s) | 94, 374, 539 |
| PpsI | GAGTC | 3 cut(s) | 94, 374, 539 |
| PsiI | TTATAA | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 1 cut(s) | 264 |
| PsuI | RGATCY | 2 cut(s) | 115, 457 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 587 |
| SatI | GCNGC | 1 cut(s) | 492 |
| Sau3AI | GATC | 3 cut(s) | 115, 419, 457 |
| SchI | GAGTC | 3 cut(s) | 95, 374, 540 |
| SduI | GDGCHC | 2 cut(s) | 267, 376 |
| SetI | ASST | 6 cut(s) | 252, 351, 373, 435, 442, 540 |
| SfaNI | GCATC | 1 cut(s) | 503 |
| SmlI | CTYRAG | 1 cut(s) | 329 |
| SmoI | CTYRAG | 1 cut(s) | 329 |
| Sse9I | AATT | 2 cut(s) | 308, 584 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| TaiI | ACGT | 3 cut(s) | 252, 373, 540 |
| TaqI | TCGA | 3 cut(s) | 345, 378, 497 |
| TasI | AATT | 2 cut(s) | 308, 584 |
| TatI | WGTACW | 1 cut(s) | 10 |
| TfiI | GAWTC | 3 cut(s) | 104, 128, 515 |
| Tru1I | TTAA | 1 cut(s) | 587 |
| Tru9I | TTAA | 1 cut(s) | 587 |
| TseI | GCWGC | 1 cut(s) | 491 |
| TspDTI | ATGAA | 6 cut(s) | 198, 227, 303, 468, 560, 597 |
| TspGWI | ACGGA | 2 cut(s) | 293, 412 |
| XapI | RAATTY | 1 cut(s) | 308 |