Rorug04G0012900

Choline monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0005808
Physical Location & Seq
Reverse (-)
2037223 .. 2041360
4138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0012900.1

Sequence Viewer

Length: 3423 bp
ATGGCTTCTCTGACCACTGAAGCAGGAGCAGCCAGTTCTTCATCTTCTTCTCTCACTCTTTCTTCTACTGATCACCAAAAGCATTACACATACGAGGTCTTCCTGAGTTTTCGAGGCGAGGATACGCGTTCTAGTTTTACGGATCATTTGTATACCGCTTTGTGTGACCGGGGAATTGAGACCTTCAGAGATGATAAGCTTAGAAGAGGAGAAGAAATATCAGCGGCACTTCTCAAGGCAATTGAGGAGTCCAGAGTTTCAGTCGTCGTCTTCTCTCAAAATTATGCTTCCTCAAGGTGGTGTTTGGATGAACTCGCCAAGATACTTGAATGCAGAAAATCTAAAGGACAAGAGGTTATACCAGTTTTCTACAAAGTGGATCCCTCACATGTACGACACCAAAGAGGTGCTTTCGGTGATGCATTTCCCACACTTGATCAATGCAAATACAAGGATAGGGTGGGCAAATGGAGGGAAGCTCTTTCAGATGCAGCAAATTTGTCTGGATGGACTTACGAGGAAGACTGGTCCGAAGCTGAATTTATCAAGAAGATTGTTGTGGACTTGTCCGCCCGAGTAGTAAACCCTTCATATGACTTGGATGTTGCTAAACATCCAATTGGATTAGAGTCTTGTATACAAGATGTCAACAGTCTTTTAAAAGTTGAGGAAAATATTGTTCGCATGGTGGGCATATGGGGGCCTGGTGGAATAGGAAAGACCACAATTGCGAAAGCTGTGTTTAATTCAATTCACCATAAGTTTGAACGTTCCTGTTTCTTGCCAGATGTTAGATCAAAAGACCTAGCCCAACTGCAAGAGACACTTTTGTTTGATATTTTAAACTCAACTTTGAAGGTCAAGATGTTAAATGATCGTCTTGCTTTGGAGTTGTTTAGCTTGCATGCATTCAAAAGAAATGAACCTCCAAGCGATTATTTGGAACTTGCACAACATGTTATACGCTATGCCCAAGGCCTTCCATTAGCTTTGATAGTCTTAGGCTCTCATCTATTTCGGAGAAGCACAGAGGAGTGGGAAGCTACAATAGGTAGTTGTAAAGGAGGTCCTCAGGCAGATATACAGAAAGTTCTCAAACTAAGTTATGATGCTCTAGAAAAGGGTTTGCAAGAACTATTTCTTGATATTGCTTGCTTCTTTAAAGGTGAGCATGTGGCCCGTGTGAAACCAATACTAGAAGCTTGCTACGACAACAAAACAATGGAGCTTGGTATTGCACAGCTGCAAGAAAAAGCCTTGATAAGAATTGACAGAGATAGGATTTGGATGCATGACTTGATAGAAGAAATGGGTAAAGAGCTTCAAAAGTCTGAAGAAACCGGGGAACCTAGCAGAGTGTGGGGTAAAGATGATGTCAACGACGTTTTAACATATACTACAGGAACAAATGAGGTTTTAGGGATTCACGCCCCATGGAGATTATCTTCGATATCTTTGAATGCTAAAAGCTTCTCAGAGATGAAGAAGCTTAGATATATTTCTATGAGTGACGAGTTGGGATATGAATCCTTCTCTGGAGATATTGATTATCTCTCCGACCAGTTGAGGTGGCTTGATTGGCCAAAATGCCCGCTGCTATATTTTCCATCCAATTTTCATGCAAAGAAACTTGTAAATCTCGATATTTCTTGGAGTCCCGGAATCACACGACTATGGGAGGGACGTAAGGAACTCCCAGACTTTAAAGAATTCCGTAACTTGAAAAGGTTGGATCTATCTTGTTGTAGCAGTTTAGTTAAGGTTCCTGATTCAATTCGATTCCTTCATAAACTTGAAAGTCTTGAAGCGAGTGGATGCTCAAAACTGGCTGCATTTCCAAAAATTCCAGAAAAGATGGATTCCTTGAGACGACTCTATCTTTCAGGCAGTGACATAAGAGAATTGGATGTGTCAATTGGAAATCTCATTGGGCTTGAATATTTGGATCTTACCGAATGCAAAAATCTCACAACTCTACCGTGCAACATTTATGGGTTGCAAAATTTATGGTTTCTTGATCTTGATGGATGCTCAAAACTTGTCAGATTTCCAACAAATACCAGAATTTTGAATGTCGATGGTTGCTCACTATCACTTCCCAAGCTACACACGTTCAGTATCGCAGGATGCAGTTTATTATCAGATTGTGATTTCCTGATGACTCTTGATTGTTGGGAAACATTACAGTGGCTTAATCTGTCAAGAAACAACTTTGTTAGTCTTCCTGCTTGCCTCATCAAATTTGTCAGGTTGCGGGAGCTTGTCTTGGAGGGTTGCGAGAGACTCCGAGTAATTCCGGAGCTTCCACCATGTGTTTTTTACCTAAACATACTTCCAGAAATTCCAGCAAAGATGGCTTCCGTGAGACGAGTCTCTCTTTCATGCAGTGATATAAGAGAATTAGACGAGTCAATTGAAAATCTCATTGGGCTTGAAGAGTTGGATCTTAATTATTGCAAAAATCTCACAACTCTACCGTGCAACATTTATGAGTTGCATAACCTGAAGACTCTTTCTGCGAGAGGATGCTCAAAACTGGCTACATTTCCAAAAATTCCAGTAAAGATGGATTCCTTGAGACGACTCTCTCTTATAGGCAGTGACATAAGAGAATTGGATGAGTCAATTGGAAATCTCATTGGGCTTGAATATTTGAATCTTACCGAATGCAAAAATCTCACAACTCTACCGTGCAGCATTTATGGGTTGCAAAATTTATGGATTCTTAAGCTTGGTAAATGCTCAAAACTTGTTAGATTTCCAACAAATACCAGAATTTTGAATGTCGATGGTTGCTCACTATCACTTCCCAAGCTACACACGTTCAGTATCGCAGGATGCAGTTTATTATCAGATTGTGATTTCCTGATGACTCTTGATTGCTGGGAAACATTACAGTGGCTTAATCTGTCAAGAAACAATTTTGTTAGTCTTCCTGCTTGCCTCGCCAAATTTGTCAAGTTGCGGGAGCTTGACTTGTCCGGTTGCAAGAGACTCCAAGGAATTCCGGAGCTTCCACCAAACGTTATACGACGACTCACCAGGGGTTGTGAATCACTGGACAGAGAGGCGTGGCCGTCAGAGGAAGATGATTGTGAATCACTGGACAGAGAGGCGTGGTTGTTAGAAGAAGATTATTCTAAATCACTGGAGAGAGGGGTGTGGTCGTTAGATGAAGATTTTTGTGAATCACTGGACAGAGAGGCGTGGTCGTCAGATGAAGATGATTGTGAATCACTGGACAGAGAGGCGTGGCCGTCAGATGAAGATGATGATGAAGAAGAGCCAATTCCGGAGCTTCCCTCCTATTTAGAAATATTTCAATATTTCAACAAAATGGCTCTCCATCTATCTCTCTCTATCTTTCTTTTTTTTTTTTTCCTTTCTTTTCTGGAATATGCATGCTCCAGACCCTTGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00260 map00260
Pfam Domains
Protein Families
Rieske Ring_hydroxyl_A

Protein Analysis

1140

Amino Acids

129.89

Weight (kDa)

5.14

Isoelectric Point (pI)

49.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 31 - 193 6.2e-57 TIR domain
TIR_2 PF13676 33 - 128 2.4e-16 TIR domain
NB-ARC PF00931 217 - 285 3.4e-07 NB-ARC domain
WHD_ROQ1 PF23282 377 - 443 2.8e-14 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 594 - 767 1e-19 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 621 - 680 3.3e-06 Leucine-rich repeat region
LRR_14 PF23598 787 - 866 2.5e-06 Leucine-rich repeat region
LRR_13 PF23286 838 - 1004 3.5e-23 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 858 - 1015 3.5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 152, 637
AccII CGCG 1 cut(s) 127
AccIII TCCGGA 3 cut(s) 2296, 3007, 3292
AciI CCGC 6 cut(s) 156, 224, 570, 1592, 2254, 2965
AclI AACGTT 2 cut(s) 769, 3024
AclWI GGATC 6 cut(s) 150, 374, 387, 1740, 1953, 2451
AcoI YGGCCR 3 cut(s) 1580, 3074, 3254
AcuI CTGAAG 4 cut(s) 39, 169, 1353, 2525
AdeI CACNNNGTG 1 cut(s) 2312
AfaI GTAC 1 cut(s) 393
AfiI CCNNNNNNNGG 1 cut(s) 297
AflII CTTAAG 1 cut(s) 2726
AflIII ACRYGT 5 cut(s) 125, 388, 955, 2109, 2820
AjnI CCWGG 2 cut(s) 703, 3041
AjuI GAANNNNNNNTTGG 2 cut(s) 2409, 2441
Alw26I GTCTC 8 cut(s) 173, 815, 1861, 2275, 2359, 2377, 2572, 2986
AlwI GGATC 6 cut(s) 150, 374, 387, 1740, 1953, 2451
Ama87I CYCGRG 1 cut(s) 573
Aor13HI TCCGGA 3 cut(s) 2296, 3007, 3292
AoxI GGCC 6 cut(s) 701, 976, 1176, 1580, 3074, 3254
ApeKI GCWGC 6 cut(s) 29, 491, 1243, 1594, 1829, 2694
Asp700I GAANNNNTTC 2 cut(s) 1137, 3318
AspS9I GGNCC 4 cut(s) 528, 701, 1067, 1177
AsuC2I CCSGG 3 cut(s) 170, 1342, 1659
AsuHPI GGTGA 5 cut(s) 65, 428, 746, 1178, 3031
AvaI CYCGRG 1 cut(s) 573
AvaII GGWCC 2 cut(s) 528, 1067
AxyI CCTNAGG 1 cut(s) 1071
BalI TGGCCA 1 cut(s) 1582
BamHI GGATCC 1 cut(s) 379
BbsI GAAGAC 6 cut(s) 91, 262, 528, 2213, 2513, 2924
BbvI GCAGC 6 cut(s) 41, 503, 1230, 1581, 1816, 2706
BccI CCATC 9 cut(s) 501, 1615, 1849, 2018, 2072, 2347, 2560, 2783, 3354
BceAI ACGGC 2 cut(s) 3061, 3241
BciT130I CCWGG 2 cut(s) 705, 3043
BciVI GTATCC 1 cut(s) 115
BclI TGATCA 2 cut(s) 70, 436
BcnI CCSGG 3 cut(s) 170, 1342, 1659
BcoDI GTCTC 8 cut(s) 173, 815, 1861, 2275, 2359, 2377, 2572, 2986
BfaI CTAG 5 cut(s) 132, 806, 1115, 1196, 1350
BfmI CTRYAG 1 cut(s) 1398
BfrI CTTAAG 1 cut(s) 2726
BfuI GTATCC 1 cut(s) 115
BisI GCNGC 7 cut(s) 30, 225, 492, 1244, 1595, 1830, 2695
BlsI GCNGC 7 cut(s) 31, 226, 493, 1245, 1596, 1831, 2696
Bme1390I CCNGG 5 cut(s) 170, 705, 1342, 1659, 3043
Bme18I GGWCC 2 cut(s) 528, 1067
BmeT110I CYCGRG 1 cut(s) 573
BmgT120I GGNCC 4 cut(s) 528, 701, 1067, 1177
BmiI GGNNCC 4 cut(s) 381, 702, 1347, 1764
BmrFI CCNGG 5 cut(s) 170, 705, 1342, 1659, 3043
BmsI GCATC 9 cut(s) 409, 478, 1099, 1278, 1805, 2018, 2117, 2516, 2828
BpiI GAAGAC 6 cut(s) 91, 262, 528, 2213, 2513, 2924
BplI GAGNNNNNCTC 4 cut(s) 463, 495, 3287, 3319
BpmI CTGGAG 3 cut(s) 1557, 3170, 3391
BpuEI CTTGAG 4 cut(s) 218, 277, 1885, 2596
BpuMI CCSGG 3 cut(s) 170, 1342, 1659
BsaBI GATNNNNATC 1 cut(s) 1525
BsaI GGTCTC 1 cut(s) 173
BsaJI CCNNGG 6 cut(s) 169, 973, 1341, 1433, 2998, 3042
BsaWI WCCGGW 4 cut(s) 2296, 2981, 3007, 3292
Bsc4I CCNNNNNNNGG 1 cut(s) 297
Bse21I CCTNAGG 1 cut(s) 1071
Bse8I GATNNNNATC 1 cut(s) 1525
BseAI TCCGGA 3 cut(s) 2296, 3007, 3292
BseBI CCWGG 2 cut(s) 705, 3043
BseDI CCNNGG 6 cut(s) 169, 973, 1341, 1433, 2998, 3042
BseJI GATNNNNATC 1 cut(s) 1525
BseLI CCNNNNNNNGG 1 cut(s) 297
BseMII CTCAG 3 cut(s) 95, 1085, 1488
BseRI GAGGAG 3 cut(s) 222, 260, 1046
BseXI GCAGC 6 cut(s) 41, 503, 1230, 1581, 1816, 2706
BseYI CCCAGC 1 cut(s) 2883
BsgI GTGCAG 1 cut(s) 2713
Bsh1236I CGCG 1 cut(s) 127
BshFI GGCC 6 cut(s) 703, 978, 1178, 1582, 3076, 3256
BsiHKCI CYCGRG 1 cut(s) 573
BsiSI CCGG 7 cut(s) 169, 1341, 1659, 2297, 2982, 3008, 3293
BslFI GGGAC 2 cut(s) 1641, 1695
BslI CCNNNNNNNGG 1 cut(s) 297
BsmAI GTCTC 8 cut(s) 173, 815, 1861, 2275, 2359, 2377, 2572, 2986
BsmBI CGTCTC 3 cut(s) 1861, 2359, 2572
BsmFI GGGAC 2 cut(s) 1641, 1695
BsmI GAATGC 5 cut(s) 335, 908, 1465, 1961, 2672
BsnI GGCC 6 cut(s) 703, 978, 1178, 1582, 3076, 3256
Bso31I GGTCTC 1 cut(s) 173
BsoBI CYCGRG 1 cut(s) 573
Bsp13I TCCGGA 3 cut(s) 2296, 3007, 3292
Bsp19I CCATGG 1 cut(s) 1433
BspACI CCGC 6 cut(s) 156, 224, 570, 1592, 2254, 2965
BspANI GGCC 6 cut(s) 703, 978, 1178, 1582, 3076, 3256
BspCNI CTCAG 3 cut(s) 96, 1084, 1487
BspEI TCCGGA 3 cut(s) 2296, 3007, 3292
BspFNI CGCG 1 cut(s) 127
BspLI GGNNCC 4 cut(s) 381, 702, 1347, 1764
BspPI GGATC 6 cut(s) 150, 374, 387, 1740, 1953, 2451
BspQI GCTCTTC 1 cut(s) 3276
BspTI CTTAAG 1 cut(s) 2726
BspTNI GGTCTC 1 cut(s) 173
BssECI CCNNGG 6 cut(s) 169, 973, 1341, 1433, 2998, 3042
BssNAI GTATAC 2 cut(s) 153, 638
BssT1I CCWWGG 3 cut(s) 973, 1433, 2998
Bst1107I GTATAC 2 cut(s) 153, 638
Bst2UI CCWGG 2 cut(s) 705, 3043
Bst4CI ACNGT 6 cut(s) 653, 1980, 2187, 2478, 2691, 2898
Bst6I CTCTTC 3 cut(s) 199, 2430, 3276
BstAFI CTTAAG 1 cut(s) 2726
BstC8I GCNNGC 8 cut(s) 902, 906, 1153, 1204, 1592, 2230, 2941, 3403
BstDEI CTNAG 7 cut(s) 104, 200, 1000, 1071, 1100, 1474, 1490
BstDSI CCRYGG 1 cut(s) 1433
BstFNI CGCG 1 cut(s) 127
BstMAI GTCTC 8 cut(s) 173, 815, 1861, 2275, 2359, 2377, 2572, 2986
BstMWI GCNNNNNNNGC 5 cut(s) 29, 690, 1579, 2354, 2945
BstNI CCWGG 2 cut(s) 705, 3043
BstNSI RCATGY 5 cut(s) 392, 908, 959, 1175, 3405
BstSCI CCNGG 5 cut(s) 168, 703, 1340, 1657, 3041
BstSFI CTRYAG 1 cut(s) 1398
BstUI CGCG 1 cut(s) 127
BstV1I GCAGC 6 cut(s) 41, 503, 1230, 1581, 1816, 2706
BstV2I GAAGAC 6 cut(s) 91, 262, 528, 2213, 2513, 2924
BstX2I RGATCY 4 cut(s) 379, 1732, 1945, 2443
BstYI RGATCY 4 cut(s) 379, 1732, 1945, 2443
BstZ17I GTATAC 2 cut(s) 153, 638
Bsu36I CCTNAGG 1 cut(s) 1071
BsuI GTATCC 1 cut(s) 115
BsuRI GGCC 6 cut(s) 703, 978, 1178, 1582, 3076, 3256
BtgI CCRYGG 1 cut(s) 1433
BtsI GCAGTG 3 cut(s) 1894, 2392, 2605
Cac8I GCNNGC 8 cut(s) 902, 906, 1153, 1204, 1592, 2230, 2941, 3403
Cfr13I GGNCC 4 cut(s) 528, 701, 1067, 1177
Csp6I GTAC 1 cut(s) 392
CviQI GTAC 1 cut(s) 392
DdeI CTNAG 7 cut(s) 104, 200, 1000, 1071, 1100, 1474, 1490
DraI TTTAAA 4 cut(s) 660, 843, 1162, 1705
DraIII CACNNNGTG 1 cut(s) 2312
EaeI YGGCCR 3 cut(s) 1580, 3074, 3254
Eam1104I CTCTTC 3 cut(s) 199, 2430, 3276
EarI CTCTTC 3 cut(s) 199, 2430, 3276
EciI GGCGGA 1 cut(s) 559
Eco130I CCWWGG 3 cut(s) 973, 1433, 2998
Eco147I AGGCCT 1 cut(s) 978
Eco31I GGTCTC 1 cut(s) 173
Eco32I GATATC 1 cut(s) 1452
Eco47I GGWCC 2 cut(s) 528, 1067
Eco57I CTGAAG 4 cut(s) 39, 169, 1353, 2525
Eco81I CCTNAGG 1 cut(s) 1071
Eco88I CYCGRG 1 cut(s) 573
EcoO109I RGGNCCY 2 cut(s) 701, 1067
EcoRI GAATTC 2 cut(s) 1709, 3003
EcoRII CCWGG 2 cut(s) 703, 3041
EcoRV GATATC 1 cut(s) 1452
EcoT14I CCWWGG 3 cut(s) 973, 1433, 2998
EcoT22I ATGCAT 4 cut(s) 424, 910, 1293, 3403
ErhI CCWWGG 3 cut(s) 973, 1433, 2998
Esp3I CGTCTC 3 cut(s) 1861, 2359, 2572
FalI AAGNNNNNCTT 4 cut(s) 394, 426, 810, 842
FaqI GGGAC 2 cut(s) 1641, 1695
FauI CCCGC 3 cut(s) 1599, 2247, 2958
FauNDI CATATG 2 cut(s) 592, 695
FbaI TGATCA 2 cut(s) 70, 436
FblI GTMKAC 2 cut(s) 152, 637
Fnu4HI GCNGC 7 cut(s) 30, 225, 492, 1244, 1595, 1830, 2695
Fsp4HI GCNGC 7 cut(s) 30, 225, 492, 1244, 1595, 1830, 2695
FspBI CTAG 5 cut(s) 132, 806, 1115, 1196, 1350
GluI GCNGC 7 cut(s) 30, 225, 492, 1244, 1595, 1830, 2695
GsaI CCCAGC 1 cut(s) 2887
GsuI CTGGAG 3 cut(s) 1557, 3170, 3391
HaeIII GGCC 6 cut(s) 703, 978, 1178, 1582, 3076, 3256
HapII CCGG 7 cut(s) 169, 1341, 1659, 2297, 2982, 3008, 3293
HincII GTYRAC 2 cut(s) 649, 1378
HindII GTYRAC 2 cut(s) 649, 1378
HindIII AAGCTT 5 cut(s) 197, 1200, 1468, 1487, 2729
HpaII CCGG 7 cut(s) 169, 1341, 1659, 2297, 2982, 3008, 3293
HphI GGTGA 5 cut(s) 65, 428, 746, 1178, 3031
Hpy166II GTNNAC 6 cut(s) 153, 562, 583, 638, 649, 1378
Hpy8I GTNNAC 6 cut(s) 153, 562, 583, 638, 649, 1378
Hpy99I CGWCG 3 cut(s) 269, 1385, 3036
HpyAV CCTTC 6 cut(s) 193, 597, 850, 989, 1540, 1793
HpyCH4III ACNGT 6 cut(s) 653, 1980, 2187, 2478, 2691, 2898
HpyCH4IV ACGT 6 cut(s) 769, 1383, 1684, 2111, 2822, 3024
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 690, 1579, 2354, 2945
HpyF3I CTNAG 7 cut(s) 104, 200, 1000, 1071, 1100, 1474, 1490
HpySE526I ACGT 6 cut(s) 769, 1383, 1684, 2111, 2822, 3024
Kpn2I TCCGGA 3 cut(s) 2296, 3007, 3292
Ksp22I TGATCA 2 cut(s) 70, 436
LguI GCTCTTC 1 cut(s) 3276
LmnI GCTCC 8 cut(s) 26, 1225, 2257, 2299, 2968, 3010, 3295, 3410
Lsp1109I GCAGC 6 cut(s) 41, 503, 1230, 1581, 1816, 2706
LweI GCATC 9 cut(s) 409, 478, 1099, 1278, 1805, 2018, 2117, 2516, 2828
MaeI CTAG 5 cut(s) 132, 806, 1115, 1196, 1350
MaeII ACGT 6 cut(s) 769, 1383, 1684, 2111, 2822, 3024
MaeIII GTNAC 5 cut(s) 164, 1508, 1715, 1889, 2600
MfeI CAATTG 6 cut(s) 240, 618, 726, 1914, 2412, 2625
MflI RGATCY 4 cut(s) 379, 1732, 1945, 2443
MlsI TGGCCA 1 cut(s) 1582
MluI ACGCGT 1 cut(s) 125
MluNI TGGCCA 1 cut(s) 1582
MmeI TCCRAC 5 cut(s) 1581, 1710, 2075, 2421, 2786
Mox20I TGGCCA 1 cut(s) 1582
Mph1103I ATGCAT 4 cut(s) 424, 910, 1293, 3403
MroI TCCGGA 3 cut(s) 2296, 3007, 3292
MroXI GAANNNNTTC 2 cut(s) 1137, 3318
MscI TGGCCA 1 cut(s) 1582
MslI CAYNNNNRTG 3 cut(s) 1672, 2185, 2896
Msp20I TGGCCA 1 cut(s) 1582
MspA1I CMGCKG 3 cut(s) 224, 1243, 1594
MspCI CTTAAG 1 cut(s) 2726
MspI CCGG 7 cut(s) 169, 1341, 1659, 2297, 2982, 3008, 3293
MspR9I CCNGG 5 cut(s) 170, 705, 1342, 1659, 3043
MunI CAATTG 6 cut(s) 240, 618, 726, 1914, 2412, 2625
Mva1269I GAATGC 5 cut(s) 335, 908, 1465, 1961, 2672
MvaI CCWGG 2 cut(s) 705, 3043
MvnI CGCG 1 cut(s) 127
MwoI GCNNNNNNNGC 5 cut(s) 29, 690, 1579, 2354, 2945
NciI CCSGG 3 cut(s) 170, 1342, 1659
NcoI CCATGG 1 cut(s) 1433
NdeI CATATG 2 cut(s) 592, 695
NlaIV GGNNCC 4 cut(s) 381, 702, 1347, 1764
NmuCI GTSAC 4 cut(s) 164, 1508, 1889, 2600
NsiI ATGCAT 4 cut(s) 424, 910, 1293, 3403
NspI RCATGY 5 cut(s) 392, 908, 959, 1175, 3405
PaeI GCATGC 2 cut(s) 908, 3405
PceI AGGCCT 1 cut(s) 978
PciI ACATGT 2 cut(s) 388, 955
PciSI GCTCTTC 1 cut(s) 3276
PctI GAATGC 5 cut(s) 335, 908, 1465, 1961, 2672
PdmI GAANNNNTTC 2 cut(s) 1137, 3318
PfoI TCCNGGA 1 cut(s) 1657
PkrI GCNGC 7 cut(s) 31, 226, 493, 1245, 1596, 1831, 2696
PpuMI RGGWCCY 1 cut(s) 1067
PscI ACATGT 2 cut(s) 388, 955
Psp1406I AACGTT 2 cut(s) 769, 3024
Psp5II RGGWCCY 1 cut(s) 1067
Psp6I CCWGG 2 cut(s) 703, 3041
PspFI CCCAGC 1 cut(s) 2883
PspGI CCWGG 2 cut(s) 703, 3041
PspN4I GGNNCC 4 cut(s) 381, 702, 1347, 1764
PspPI GGNCC 4 cut(s) 528, 701, 1067, 1177
PspPPI RGGWCCY 1 cut(s) 1067
PsuI RGATCY 4 cut(s) 379, 1732, 1945, 2443
PvuII CAGCTG 1 cut(s) 1243
RsaI GTAC 1 cut(s) 393
RsaNI GTAC 1 cut(s) 392
RseI CAYNNNNRTG 3 cut(s) 1672, 2185, 2896
SapI GCTCTTC 1 cut(s) 3276
SatI GCNGC 7 cut(s) 30, 225, 492, 1244, 1595, 1830, 2695
Sau96I GGNCC 4 cut(s) 528, 701, 1067, 1177
ScrFI CCNGG 5 cut(s) 170, 705, 1342, 1659, 3043
SfaNI GCATC 9 cut(s) 409, 478, 1099, 1278, 1805, 2018, 2117, 2516, 2828
SfcI CTRYAG 1 cut(s) 1398
SinI GGWCC 2 cut(s) 528, 1067
SmiMI CAYNNNNRTG 3 cut(s) 1672, 2185, 2896
SmlI CTYRAG 5 cut(s) 233, 292, 1864, 2575, 2726
SmoI CTYRAG 5 cut(s) 233, 292, 1864, 2575, 2726
SphI GCATGC 2 cut(s) 908, 3405
SseBI AGGCCT 1 cut(s) 978
SsiI CCGC 6 cut(s) 156, 224, 570, 1592, 2254, 2965
SspI AATATT 5 cut(s) 676, 1940, 2651, 3318, 3326
SspMI CTAG 5 cut(s) 132, 806, 1115, 1196, 1350
StuI AGGCCT 1 cut(s) 978
StyD4I CCNGG 5 cut(s) 168, 703, 1340, 1657, 3041
StyI CCWWGG 3 cut(s) 973, 1433, 2998
TaaI ACNGT 6 cut(s) 653, 1980, 2187, 2478, 2691, 2898
TaiI ACGT 6 cut(s) 772, 1386, 1687, 2114, 2825, 3027
TaqI TCGA 6 cut(s) 112, 1448, 1641, 1777, 2076, 2787
TauI GCSGC 1 cut(s) 227
TseFI GTSAC 4 cut(s) 164, 1508, 1889, 2600
TseI GCWGC 6 cut(s) 29, 491, 1243, 1594, 1829, 2694
Tsp45I GTSAC 4 cut(s) 164, 1508, 1889, 2600
TspGWI ACGGA 3 cut(s) 155, 1703, 2350
Vha464I CTTAAG 1 cut(s) 2726
VpaK11BI GGWCC 2 cut(s) 528, 1067
XbaI TCTAGA 1 cut(s) 1114
XceI RCATGY 5 cut(s) 392, 908, 959, 1175, 3405
XmiI GTMKAC 2 cut(s) 152, 637
XmnI GAANNNNTTC 2 cut(s) 1137, 3318
XspI CTAG 5 cut(s) 132, 806, 1115, 1196, 1350
Zsp2I ATGCAT 4 cut(s) 424, 910, 1293, 3403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.