Core-2/I-Branching enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10880 |
| fragaria_vesca | FvH4_4g26974 FvH4_5g11820 |
| malus_domestica | MD14G1228300.v1.1 MD16G1039600.v1.1 |
| prunus_persica | Prupe.1G314500_v2.0.a1 Prupe.5G223400_v2.0.a1 |
| pyrus_communis | pycom14g18970 |
| rosa_chinensis | RchiOBHm_Chr4g0434761 RchiOBHm_Chr7g0185781 |
| rosa_laevigata | RLG00000004884 RLG00000006651 |
| rosa_multiflora | Rmu_sc0002121.1_g000004 Rmu_sc0011187.1_g000001 Rmu_sc0017904.1_g000003 Rmu_sc0017905.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00268630 Rroxscaffold_5G00375970 |
| rosa_rugosa | Rorug04G0278200 Rorug06G0471200.1 |
| rosa_samantha | Rh4AG334600 Rh4BG343200 Rh4CG357600 Rh4DG336900 Rh7AG071100 Rh7BG076700 Rh7CG076700 Rh7DG076600 |
| rosa_wichuraiana | Rw4G029180 Rw7G006390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 168 |
| AclWI | GGATC | 1 cut(s) | 127 |
| AcsI | RAATTY | 1 cut(s) | 188 |
| AgsI | TTSAA | 1 cut(s) | 194 |
| AluBI | AGCT | 1 cut(s) | 29 |
| AluI | AGCT | 1 cut(s) | 29 |
| AlwI | GGATC | 1 cut(s) | 127 |
| ApoI | RAATTY | 1 cut(s) | 188 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 13, 45 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| AsuII | TTCGAA | 1 cut(s) | 180 |
| BglII | AGATCT | 1 cut(s) | 44 |
| BmsI | GCATC | 1 cut(s) | 70 |
| Bpu14I | TTCGAA | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 1 cut(s) | 198 |
| BseDI | CCNNGG | 1 cut(s) | 198 |
| BseMII | CTCAG | 1 cut(s) | 81 |
| Bsh1285I | CGRYCG | 1 cut(s) | 214 |
| BsiEI | CGRYCG | 1 cut(s) | 214 |
| Bsp119I | TTCGAA | 1 cut(s) | 180 |
| Bsp143I | GATC | 4 cut(s) | 44, 73, 119, 211 |
| Bsp19I | CCATGG | 1 cut(s) | 198 |
| BspACI | CCGC | 1 cut(s) | 168 |
| BspCNI | CTCAG | 1 cut(s) | 80 |
| BspPI | GGATC | 1 cut(s) | 127 |
| BspQI | GCTCTTC | 1 cut(s) | 32 |
| BspT104I | TTCGAA | 1 cut(s) | 180 |
| BssECI | CCNNGG | 1 cut(s) | 198 |
| BssMI | GATC | 4 cut(s) | 44, 73, 119, 211 |
| BssT1I | CCWWGG | 1 cut(s) | 198 |
| Bst6I | CTCTTC | 1 cut(s) | 32 |
| BstBI | TTCGAA | 1 cut(s) | 180 |
| BstDEI | CTNAG | 1 cut(s) | 67 |
| BstDSI | CCRYGG | 1 cut(s) | 198 |
| BstKTI | GATC | 4 cut(s) | 47, 76, 122, 214 |
| BstMBI | GATC | 4 cut(s) | 44, 73, 119, 211 |
| BstMCI | CGRYCG | 1 cut(s) | 214 |
| BstX2I | RGATCY | 1 cut(s) | 44 |
| BstYI | RGATCY | 1 cut(s) | 44 |
| BtgI | CCRYGG | 1 cut(s) | 198 |
| BtgZI | GCGATG | 1 cut(s) | 161 |
| CseI | GACGC | 1 cut(s) | 169 |
| CviAII | CATG | 2 cut(s) | 131, 199 |
| CviJI | RGCY | 1 cut(s) | 29 |
| CviKI_1 | RGCY | 1 cut(s) | 29 |
| DdeI | CTNAG | 1 cut(s) | 67 |
| DpnI | GATC | 4 cut(s) | 46, 75, 121, 213 |
| DpnII | GATC | 4 cut(s) | 44, 73, 119, 211 |
| Eam1104I | CTCTTC | 1 cut(s) | 32 |
| EarI | CTCTTC | 1 cut(s) | 32 |
| Eco130I | CCWWGG | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 1 cut(s) | 198 |
| ErhI | CCWWGG | 1 cut(s) | 198 |
| FaeI | CATG | 2 cut(s) | 134, 202 |
| FaiI | YATR | 4 cut(s) | 14, 117, 132, 200 |
| FatI | CATG | 2 cut(s) | 130, 198 |
| HgaI | GACGC | 1 cut(s) | 169 |
| Hin1II | CATG | 2 cut(s) | 134, 202 |
| HindIII | AAGCTT | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 3 cut(s) | 49, 70, 124 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 215 |
| Hpy99I | CGWCG | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 83, 93 |
| HpyF3I | CTNAG | 1 cut(s) | 67 |
| Hsp92II | CATG | 2 cut(s) | 134, 202 |
| Kzo9I | GATC | 4 cut(s) | 44, 73, 119, 211 |
| LguI | GCTCTTC | 1 cut(s) | 32 |
| LpnPI | CCDG | 2 cut(s) | 32, 95 |
| LweI | GCATC | 1 cut(s) | 70 |
| MalI | GATC | 4 cut(s) | 46, 75, 121, 213 |
| MboI | GATC | 4 cut(s) | 44, 73, 119, 211 |
| MboII | GAAGA | 4 cut(s) | 49, 83, 146, 169 |
| MfeI | CAATTG | 1 cut(s) | 84 |
| MflI | RGATCY | 1 cut(s) | 44 |
| MluCI | AATT | 2 cut(s) | 84, 188 |
| MseI | TTAA | 3 cut(s) | 6, 63, 204 |
| MunI | CAATTG | 1 cut(s) | 84 |
| NcoI | CCATGG | 1 cut(s) | 198 |
| NdeII | GATC | 4 cut(s) | 44, 73, 119, 211 |
| NlaIII | CATG | 2 cut(s) | 134, 202 |
| NspV | TTCGAA | 1 cut(s) | 180 |
| PciSI | GCTCTTC | 1 cut(s) | 32 |
| Ple19I | CGATCG | 1 cut(s) | 214 |
| PsuI | RGATCY | 1 cut(s) | 44 |
| PvuI | CGATCG | 1 cut(s) | 214 |
| SapI | GCTCTTC | 1 cut(s) | 32 |
| SaqAI | TTAA | 3 cut(s) | 6, 63, 204 |
| Sau3AI | GATC | 4 cut(s) | 44, 73, 119, 211 |
| SetI | ASST | 1 cut(s) | 31 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| SfuI | TTCGAA | 1 cut(s) | 180 |
| SgeI | CNNG | 6 cut(s) | 31, 38, 89, 122, 143, 211 |
| Sse9I | AATT | 2 cut(s) | 84, 188 |
| SsiI | CCGC | 1 cut(s) | 168 |
| StyI | CCWWGG | 1 cut(s) | 198 |
| TaqI | TCGA | 2 cut(s) | 158, 180 |
| TasI | AATT | 2 cut(s) | 84, 188 |
| Tru1I | TTAA | 3 cut(s) | 6, 63, 204 |
| Tru9I | TTAA | 3 cut(s) | 6, 63, 204 |
| TspDTI | ATGAA | 2 cut(s) | 92, 147 |
| TspGWI | ACGGA | 1 cut(s) | 48 |
| XapI | RAATTY | 1 cut(s) | 188 |