Rorug04G0328700

Protein of unknown function (DUF3675)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002299
Physical Location & Seq
Reverse (-)
50334058 .. 50339345
5288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0328700.1

Sequence Viewer

Length: 2130 bp
ATGAAGGATTCCACTGTTTACTCACTCTTCTTCTTCTTCTTCTTCTGTTTTGGCGACTTCGCTGACTCTTTGACTCCCGACGGCCTCTCCCTCCTCTCCCTCAAATCCGCCGTCGACCAGTCCACCGCCGGCTCCGCCTTCTCCGACTGGGCCGACTCCGACGCCTCGCCCTGCCGATGGACCGGCATTTCCTGCATGAACATCACCGGATTCCCCGACCCCCGCGTCGTCGGGATCGCGCTCTCCGGCAAGAATCTCCGGGGCTACATCCCCTCCGAGCTCGGAAACTTAGTCTATCTGCGGCGGCTCAACCTCCACAGCAACAACTTCTACGGCGCCATCCCGACTCAGCTCTTCAATGCCACGTCACTCCACAGCCTCTTCCTCTACGGTAACAACCTCTCCGGTCAGCTCCCGCCGTCGATCTGTAACCTCCCGCGCCTCCAGAACCTCGACCTCTCCAACAACTCCCTCTCCGGTTCTTTAGACAAGGGCCTCAACAACTGTAAGCAATTGCAGAGACTGATACTCGCCGGAAACCATTTCACCGGCGAAATCCCGGCCGGAATTTGGTCCGGTATGGAAAACCTCCTCCAATTGGACCTCTCCGACAACCGTTTCACCGGATCGGTGCCGGAAGATTTCGGCGACCTGAAGTCTCTCTCCGGCACGCTCAACCTCTCGTTCAATCACTTATCCGGCAAGATTCCGAAATCGCTGGGAGACTTACCGGTGACGGTGAGCTTCGATCTCCGCAACAATAATTTCAGCGGCGAAATTCCCCAAACGGGGTCGTTTTCGAACCAGGGCCCGACCGCGTTTCTCAACAACCCTCTCTTATGCGGGTTTCCGCTCCAGAAATCTTGCAAAGACCAGGCCCCGAGTTCCCCGGGTAACCCGAATTCCTCGCCCGGATCCGACAACAACCCGAAAAAGGGGTTGAGTCCGGGTCTGATCATCCTCATCTCCGTAGCCGACGCCGCCGCAGTCGCATTCATCGGTTTGGTCGTAGTTTACATTTACTGGAAAAAGAAGGACAATGCCAACGGCTGTTCATGTACCGGAAAGACAAAATTCGGCGCGAACACCGAGAAAAGCCGACTCTGTTGTTCTTGCATCAACGGCGGGTTCGGGAACTCGGACTCCGAACTCGACCCGCCCGAGAGAGGAAGAGGCGAAGGAGAGCTTGTGGCAATCGATAAGGGGTTCACATTTGAACTCGACGAGCTGCTGAGAGCGTCGGCTTATGTTCTGGGGAAGAGTGGGTTGGGGATTGTGTACAAGGTGGTGCTGGGGAATGGGATTCCCGTGGCGGTGAGGAGGTTGGGGGAGGGCGGCGATCAGAGGTACAAGGAGTTCGCGGCGGAGGTTCAGGCGATCGGTAGAGTGAAGCATCCGAACGTGGTGAGGCTGAGGGCGTACTATTGGGCCCCCGACGAGAAGCTCTTGATCAGTGATTTTATTTCGCATGGGAACTTGGCCTCTGCGATTCGCGGGAGAAATGGTCAGCCTATAAGCCTCTCATGGTCAACGAGGCTGAAGATCTTAAAGGGAACAGCGCGAGGCTTGGCCTATCTCCACGAATGCAGCCCCCGAAAATTTGTCCATGGAGACATCAAACCTTCCAACATTCTACTCGACAACGAATCTCAACCCTACATTTCTGATTTCGGACTCAACAGACTGATCACCATAACTGGCAACAACCCCTCCTCGGGTGGCTTGATGGGTAGCGCTCTCCCTTACATGAAATCTAGCCAAACGGAGCGAGCCAACAACTACAGAGCTCCGGAGGCTAGAGTCCCGAGTAATAAACCAACTCAAAAATGGGATGTTTATTCATTCGGAGTTGTCCTGCTGGAGTTGCTCACAGGAAAGTCTCCAGAGCTATCTCCAACTAGTACCTCAACTTCCCTAGAGATACCGGACTTGGTGAGGTGGGTGAGGAAAGGATTTGAGGATGAAAACCCTCTTTCGGATATGGTAGACCCTGTGTTGCTTCAAGAAGTTCATGCCAAAAAGGAAGTGCTAGCAGCTTTTCATGTAGCACTTGCTTGTACTGAGCCTGATCCTGAGGTTAGGCCGAGGATGAAAACTGTCTCCGAGAATCTCGAAAGGGTTGGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3675 RINGv

Protein Analysis

709

Amino Acids

76.86

Weight (kDa)

7.49

Isoelectric Point (pI)

32.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 8.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 68 - 176 6.2e-07 Leucine-rich repeat region
LRR_8 PF13855 100 - 158 2.2e-06 Leucine rich repeat
LRR_8 PF13855 171 - 232 1.1e-08 Leucine rich repeat
Pkinase PF00069 417 - 647 1.3e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 418 - 704 8e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
AccB1I GGYRCC 2 cut(s) 335, 631
AccBSI CCGCTC 1 cut(s) 853
AccI GTMKAC 2 cut(s) 114, 1986
AccII CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
AccIII TCCGGA 1 cut(s) 1789
AclWI GGATC 5 cut(s) 242, 634, 909, 922, 2063
AcoI YGGCCR 1 cut(s) 561
AcsI RAATTY 5 cut(s) 567, 777, 901, 1073, 1598
AcuI CTGAAG 2 cut(s) 674, 1559
AcyI GRCGYC 3 cut(s) 162, 336, 978
AfaI GTAC 6 cut(s) 1060, 1280, 1349, 1421, 1903, 2059
AfeI AGCGCT 1 cut(s) 1735
AgeI ACCGGT 1 cut(s) 730
AgsI TTSAA 4 cut(s) 358, 688, 1217, 2003
AhdI GACNNNNNGTC 1 cut(s) 655
AhlI ACTAGT 1 cut(s) 1898
AjiI CACGTC 1 cut(s) 366
AjnI CCWGG 2 cut(s) 804, 873
AjuI GAANNNNNNNTTGG 2 cut(s) 1250, 1282
AloI GAACNNNNNNTCC 2 cut(s) 1127, 1159
Alw21I GWGCWC 2 cut(s) 282, 1789
Alw26I GTCTC 6 cut(s) 514, 663, 717, 1605, 1884, 2104
AlwI GGATC 5 cut(s) 242, 634, 909, 922, 2063
AlwNI CAGNNNCTG 1 cut(s) 523
Ama87I CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
Aor13HI TCCGGA 1 cut(s) 1789
Aor51HI AGCGCT 1 cut(s) 1735
ApaI GGGCCC 2 cut(s) 812, 1432
ApeKI GCWGC 3 cut(s) 1228, 1587, 2033
ApoI RAATTY 5 cut(s) 567, 777, 901, 1073, 1598
ArsI GACNNNNNNTTYG 2 cut(s) 96, 128
AsiGI ACCGGT 1 cut(s) 730
AspLEI GCGC 6 cut(s) 241, 338, 441, 1082, 1561, 1736
AsuC2I CCSGG 6 cut(s) 260, 560, 890, 891, 912, 948
AsuII TTCGAA 1 cut(s) 800
AsuNHI GCTAGC 1 cut(s) 2029
AvaI CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
AvaII GGWCC 3 cut(s) 180, 573, 601
AxyI CCTNAGG 1 cut(s) 2073
BaeGI GKGCMC 2 cut(s) 812, 1432
BamHI GGATCC 1 cut(s) 914
BanI GGYRCC 2 cut(s) 335, 631
BanII GRGCYC 4 cut(s) 282, 812, 1432, 1789
BarI GAAGNNNNNNTAC 2 cut(s) 1894, 1926
Bbv12I GWGCWC 2 cut(s) 282, 1789
BbvCI CCTCAGC 1 cut(s) 1412
BbvI GCAGC 3 cut(s) 1215, 1599, 2045
BccI CCATC 3 cut(s) 171, 347, 1720
BceAI ACGGC 6 cut(s) 95, 97, 349, 403, 1063, 1138
BciT130I CCWGG 2 cut(s) 806, 875
BclI TGATCA 3 cut(s) 954, 1449, 1686
BcnI CCSGG 6 cut(s) 260, 560, 890, 891, 912, 948
BcoDI GTCTC 6 cut(s) 514, 663, 717, 1605, 1884, 2104
BcuI ACTAGT 1 cut(s) 1898
BfaI CTAG 5 cut(s) 1755, 1797, 1899, 1916, 2030
BfmI CTRYAG 1 cut(s) 1780
BfoI RGCGCY 2 cut(s) 339, 1737
BglII AGATCT 1 cut(s) 1542
Bme1390I CCNGG 8 cut(s) 260, 560, 806, 875, 890, 891, 912, 948
Bme18I GGWCC 3 cut(s) 180, 573, 601
BmeRI GACNNNNNGTC 1 cut(s) 655
BmeT110I CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
BmgBI CACGTC 1 cut(s) 366
BmiI GGNNCC 8 cut(s) 133, 337, 633, 810, 879, 916, 1430, 1431
BmrFI CCNGG 8 cut(s) 260, 560, 806, 875, 890, 891, 912, 948
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 2 cut(s) 1125, 1402
BmtI GCTAGC 1 cut(s) 2033
BmuI ACTGGG 1 cut(s) 157
BpmI CTGGAG 4 cut(s) 428, 839, 1866, 1880
Bpu10I CCTNAGC 1 cut(s) 1412
Bpu14I TTCGAA 1 cut(s) 800
BpuMI CCSGG 6 cut(s) 260, 560, 890, 891, 912, 948
Bsa29I ATCGAT 1 cut(s) 1197
BsaHI GRCGYC 3 cut(s) 162, 336, 978
BsaJI CCNNGG 8 cut(s) 259, 805, 888, 889, 1308, 1606, 1713, 2084
BsaWI WCCGGW 9 cut(s) 206, 404, 476, 575, 623, 730, 1061, 1789, 1924
Bse118I RCCGGY 4 cut(s) 128, 182, 548, 730
Bse1I ACTGG 4 cut(s) 118, 152, 1028, 1702
Bse21I CCTNAGG 1 cut(s) 2073
BseAI TCCGGA 1 cut(s) 1789
BseBI CCWGG 2 cut(s) 806, 875
BseCI ATCGAT 1 cut(s) 1197
BseDI CCNNGG 8 cut(s) 259, 805, 888, 889, 1308, 1606, 1713, 2084
BseGI GGATG 7 cut(s) 267, 339, 957, 1393, 1837, 1966, 2094
BseMII CTCAG 5 cut(s) 362, 1223, 1403, 2052, 2064
BseNI ACTGG 4 cut(s) 118, 152, 1028, 1702
BseRI GAGGAG 4 cut(s) 83, 581, 1333, 1702
BseSI GKGCMC 2 cut(s) 812, 1432
BseX3I CGGCCG 1 cut(s) 561
BseXI GCAGC 3 cut(s) 1215, 1599, 2045
BseYI CCCAGC 2 cut(s) 718, 1291
Bsh1236I CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
Bsh1285I CGRYCG 3 cut(s) 564, 816, 1380
BshNI GGYRCC 2 cut(s) 335, 631
BshTI ACCGGT 1 cut(s) 730
BshVI ATCGAT 1 cut(s) 1197
BsiEI CGRYCG 3 cut(s) 564, 816, 1380
BsiHKAI GWGCWC 2 cut(s) 282, 1789
BsiHKCI CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
BslFI GGGAC 1 cut(s) 1787
BsmAI GTCTC 6 cut(s) 514, 663, 717, 1605, 1884, 2104
BsmFI GGGAC 1 cut(s) 1787
BsmI GAATGC 2 cut(s) 992, 1589
BsoBI CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
Bsp119I TTCGAA 1 cut(s) 800
Bsp120I GGGCCC 2 cut(s) 808, 1428
Bsp1286I GDGCHC 4 cut(s) 282, 812, 1432, 1789
Bsp13I TCCGGA 1 cut(s) 1789
Bsp1407I TGTACA 1 cut(s) 1278
Bsp19I CCATGG 1 cut(s) 1606
BspCNI CTCAG 5 cut(s) 361, 1224, 1404, 2053, 2065
BspDI ATCGAT 1 cut(s) 1197
BspEI TCCGGA 1 cut(s) 1789
BspFNI CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
BspHI TCATGA 1 cut(s) 2126
BspLI GGNNCC 8 cut(s) 133, 337, 633, 810, 879, 916, 1430, 1431
BspOI GCTAGC 1 cut(s) 2033
BspPI GGATC 5 cut(s) 242, 634, 909, 922, 2063
BspQI GCTCTTC 1 cut(s) 359
BspT104I TTCGAA 1 cut(s) 800
BspT107I GGYRCC 2 cut(s) 335, 631
BsrBI CCGCTC 1 cut(s) 853
BsrFI RCCGGY 4 cut(s) 128, 182, 548, 730
BsrGI TGTACA 1 cut(s) 1278
BsrI ACTGG 4 cut(s) 118, 152, 1028, 1702
BssAI RCCGGY 4 cut(s) 128, 182, 548, 730
BssECI CCNNGG 8 cut(s) 259, 805, 888, 889, 1308, 1606, 1713, 2084
BssNI GRCGYC 3 cut(s) 162, 336, 978
BssT1I CCWWGG 1 cut(s) 1606
Bst2UI CCWGG 2 cut(s) 806, 875
Bst4CI ACNGT 6 cut(s) 16, 392, 506, 617, 739, 2098
Bst6I CTCTTC 5 cut(s) 32, 359, 386, 1165, 1253
BstACI GRCGYC 3 cut(s) 162, 336, 978
BstAPI GCANNNNNTGC 1 cut(s) 192
BstAUI TGTACA 1 cut(s) 1278
BstBI TTCGAA 1 cut(s) 800
BstC8I GCNNGC 4 cut(s) 130, 671, 1770, 2031
BstDEI CTNAG 6 cut(s) 289, 348, 1232, 1412, 2061, 2073
BstDSI CCRYGG 2 cut(s) 1308, 1606
BstEII GGTNACC 1 cut(s) 893
BstF5I GGATG 7 cut(s) 267, 339, 957, 1393, 1837, 1966, 2094
BstFNI CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
BstH2I RGCGCY 2 cut(s) 339, 1737
BstHHI GCGC 6 cut(s) 241, 338, 441, 1082, 1561, 1736
BstMAI GTCTC 6 cut(s) 514, 663, 717, 1605, 1884, 2104
BstMCI CGRYCG 3 cut(s) 564, 816, 1380
BstMWI GCNNNNNNNGC 7 cut(s) 134, 192, 980, 989, 1122, 1793, 1864
BstNI CCWGG 2 cut(s) 806, 875
BstPI GGTNACC 1 cut(s) 893
BstSCI CCNGG 8 cut(s) 258, 558, 804, 873, 888, 889, 910, 946
BstSFI CTRYAG 1 cut(s) 1780
BstSLI GKGCMC 2 cut(s) 812, 1432
BstUI CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
BstV1I GCAGC 3 cut(s) 1215, 1599, 2045
BstX2I RGATCY 2 cut(s) 914, 1542
BstYI RGATCY 2 cut(s) 914, 1542
BstZI CGGCCG 1 cut(s) 561
Bsu15I ATCGAT 1 cut(s) 1197
Bsu36I CCTNAGG 1 cut(s) 2073
BsuTUI ATCGAT 1 cut(s) 1197
BtgI CCRYGG 2 cut(s) 1308, 1606
BtrI CACGTC 1 cut(s) 366
BtsCI GGATG 7 cut(s) 267, 339, 957, 1393, 1837, 1966, 2094
BtsIMutI CAGTG 2 cut(s) 12, 1459
Cac8I GCNNGC 4 cut(s) 130, 671, 1770, 2031
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 2126
CfoI GCGC 6 cut(s) 241, 338, 441, 1082, 1561, 1736
Cfr10I RCCGGY 4 cut(s) 128, 182, 548, 730
Cfr9I CCCGGG 1 cut(s) 889
ClaI ATCGAT 1 cut(s) 1197
CseI GACGC 4 cut(s) 170, 214, 986, 1227
Csp6I GTAC 6 cut(s) 1059, 1279, 1348, 1420, 1902, 2058
CspAI ACCGGT 1 cut(s) 730
CviAII CATG 9 cut(s) 196, 1056, 1469, 1524, 1607, 1747, 2012, 2042, 2127
CviQI GTAC 6 cut(s) 1059, 1279, 1348, 1420, 1902, 2058
DdeI CTNAG 6 cut(s) 289, 348, 1232, 1412, 2061, 2073
DinI GGCGCC 1 cut(s) 337
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 655
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 561
EagI CGGCCG 1 cut(s) 561
Eam1104I CTCTTC 5 cut(s) 32, 359, 386, 1165, 1253
Eam1105I GACNNNNNGTC 1 cut(s) 655
EarI CTCTTC 5 cut(s) 32, 359, 386, 1165, 1253
EciI GGCGGA 3 cut(s) 97, 124, 1379
Ecl136II GAGCTC 2 cut(s) 280, 1787
EclXI CGGCCG 1 cut(s) 561
Eco130I CCWWGG 1 cut(s) 1606
Eco24I GRGCYC 4 cut(s) 282, 812, 1432, 1789
Eco47I GGWCC 3 cut(s) 180, 573, 601
Eco47III AGCGCT 1 cut(s) 1735
Eco52I CGGCCG 1 cut(s) 561
Eco53kI GAGCTC 2 cut(s) 280, 1787
Eco57I CTGAAG 2 cut(s) 674, 1559
Eco81I CCTNAGG 1 cut(s) 2073
Eco88I CYCGRG 5 cut(s) 880, 889, 1160, 1714, 1804
Eco91I GGTNACC 1 cut(s) 893
EcoICRI GAGCTC 2 cut(s) 280, 1787
EcoO109I RGGNCCY 4 cut(s) 493, 808, 877, 1429
EcoO65I GGTNACC 1 cut(s) 893
EcoRI GAATTC 1 cut(s) 901
EcoRII CCWGG 2 cut(s) 804, 873
EcoT14I CCWWGG 1 cut(s) 1606
EcoT38I GRGCYC 4 cut(s) 282, 812, 1432, 1789
EgeI GGCGCC 1 cut(s) 337
EheI GGCGCC 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 1606
FaeI CATG 9 cut(s) 199, 1059, 1472, 1527, 1610, 1750, 2015, 2045, 2130
FalI AAGNNNNNCTT 2 cut(s) 1170, 1202
FaqI GGGAC 1 cut(s) 1787
FatI CATG 9 cut(s) 195, 1055, 1468, 1523, 1606, 1746, 2011, 2041, 2126
FauI CCCGC 7 cut(s) 230, 423, 444, 836, 1118, 1164, 1487
FbaI TGATCA 3 cut(s) 954, 1449, 1686
FblI GTMKAC 2 cut(s) 114, 1986
FokI GGATG 7 cut(s) 254, 326, 944, 1380, 1844, 1973, 2101
FriOI GRGCYC 4 cut(s) 282, 812, 1432, 1789
FspBI CTAG 5 cut(s) 1755, 1797, 1899, 1916, 2030
GlaI GCGC 6 cut(s) 240, 337, 440, 1081, 1560, 1735
GsaI CCCAGC 2 cut(s) 722, 1295
GsuI CTGGAG 4 cut(s) 428, 839, 1866, 1880
HaeII RGCGCY 2 cut(s) 339, 1737
HgaI GACGC 4 cut(s) 170, 214, 986, 1227
HhaI GCGC 6 cut(s) 241, 338, 441, 1082, 1561, 1736
Hin1I GRCGYC 3 cut(s) 162, 336, 978
Hin1II CATG 9 cut(s) 199, 1059, 1472, 1527, 1610, 1750, 2015, 2045, 2130
Hin6I GCGC 6 cut(s) 239, 336, 439, 1080, 1559, 1734
HinP1I GCGC 6 cut(s) 239, 336, 439, 1080, 1559, 1734
HincII GTYRAC 2 cut(s) 115, 1530
HindII GTYRAC 2 cut(s) 115, 1530
Hpy166II GTNNAC 8 cut(s) 19, 115, 123, 1015, 1209, 1279, 1530, 1987
Hpy8I GTNNAC 8 cut(s) 19, 115, 123, 1015, 1209, 1279, 1530, 1987
HpyAV CCTTC 4 cut(s) 148, 1027, 1172, 1632
HpyCH4III ACNGT 6 cut(s) 16, 392, 506, 617, 739, 2098
HpyCH4IV ACGT 2 cut(s) 365, 1401
HpyCH4V TGCA 5 cut(s) 195, 517, 867, 1116, 1587
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 192, 980, 989, 1122, 1793, 1864
HpyF3I CTNAG 6 cut(s) 289, 348, 1232, 1412, 2061, 2073
HpySE526I ACGT 2 cut(s) 365, 1401
Hsp92I GRCGYC 3 cut(s) 162, 336, 978
Hsp92II CATG 9 cut(s) 199, 1059, 1472, 1527, 1610, 1750, 2015, 2045, 2130
HspAI GCGC 6 cut(s) 239, 336, 439, 1080, 1559, 1734
KasI GGCGCC 1 cut(s) 335
Kpn2I TCCGGA 1 cut(s) 1789
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Ksp22I TGATCA 3 cut(s) 954, 1449, 1686
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 5 cut(s) 137, 417, 858, 1765, 1792
Lsp1109I GCAGC 3 cut(s) 1215, 1599, 2045
LweI GCATC 2 cut(s) 1125, 1402
MaeI CTAG 5 cut(s) 1755, 1797, 1899, 1916, 2030
MaeII ACGT 2 cut(s) 365, 1401
MaeIII GTNAC 5 cut(s) 366, 392, 428, 733, 893
MbiI CCGCTC 1 cut(s) 853
MfeI CAATTG 2 cut(s) 512, 596
MflI RGATCY 2 cut(s) 914, 1542
MhlI GDGCHC 4 cut(s) 282, 812, 1432, 1789
MluCI AATT 8 cut(s) 512, 567, 596, 763, 777, 901, 1073, 1598
Mly113I GGCGCC 1 cut(s) 336
MlyI GAGTC 9 cut(s) 59, 67, 149, 340, 952, 1095, 1136, 1668, 1809
MmeI TCCRAC 8 cut(s) 168, 183, 486, 633, 942, 1650, 1919, 2101
MroI TCCGGA 1 cut(s) 1789
MroNI GCCGGC 1 cut(s) 128
MseI TTAA 1 cut(s) 1547
MspA1I CMGCKG 1 cut(s) 771
MspR9I CCNGG 8 cut(s) 260, 560, 806, 875, 890, 891, 912, 948
MunI CAATTG 2 cut(s) 512, 596
Mva1269I GAATGC 2 cut(s) 992, 1589
MvaI CCWGG 2 cut(s) 806, 875
MvnI CGCG 8 cut(s) 225, 239, 439, 818, 1082, 1361, 1494, 1561
MwoI GCNNNNNNNGC 7 cut(s) 134, 192, 980, 989, 1122, 1793, 1864
NaeI GCCGGC 1 cut(s) 130
NarI GGCGCC 1 cut(s) 336
NciI CCSGG 6 cut(s) 260, 560, 890, 891, 912, 948
NcoI CCATGG 1 cut(s) 1606
NgoMIV GCCGGC 1 cut(s) 128
NheI GCTAGC 1 cut(s) 2029
NlaIII CATG 9 cut(s) 199, 1059, 1472, 1527, 1610, 1750, 2015, 2045, 2130
NlaIV GGNNCC 8 cut(s) 133, 337, 633, 810, 879, 916, 1430, 1431
NmeAIII GCCGAG 1 cut(s) 2109
NmuCI GTSAC 2 cut(s) 366, 733
NspV TTCGAA 1 cut(s) 800
PagI TCATGA 1 cut(s) 2126
PciSI GCTCTTC 1 cut(s) 359
PcsI WCGNNNNNNNCGW 2 cut(s) 1005, 1158
PctI GAATGC 2 cut(s) 992, 1589
PdiI GCCGGC 1 cut(s) 130
PfeI GAWTC 8 cut(s) 8, 210, 253, 706, 1303, 1489, 1646, 2107
PinAI ACCGGT 1 cut(s) 730
Ple19I CGATCG 1 cut(s) 1380
PleI GAGTC 9 cut(s) 59, 67, 149, 340, 951, 1095, 1136, 1668, 1808
PluTI GGCGCC 1 cut(s) 339
PpsI GAGTC 9 cut(s) 59, 67, 149, 340, 951, 1095, 1136, 1668, 1808
Psp124BI GAGCTC 2 cut(s) 282, 1789
Psp6I CCWGG 2 cut(s) 804, 873
PspEI GGTNACC 1 cut(s) 893
PspFI CCCAGC 2 cut(s) 718, 1291
PspGI CCWGG 2 cut(s) 804, 873
PspN4I GGNNCC 8 cut(s) 133, 337, 633, 810, 879, 916, 1430, 1431
PspOMI GGGCCC 2 cut(s) 808, 1428
PsrI GAACNNNNNNTAC 2 cut(s) 1340, 1372
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 2 cut(s) 914, 1542
PvuI CGATCG 1 cut(s) 1380
RsaI GTAC 6 cut(s) 1060, 1280, 1349, 1421, 1903, 2059
RsaNI GTAC 6 cut(s) 1059, 1279, 1348, 1420, 1902, 2058
SacI GAGCTC 2 cut(s) 282, 1789
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 1 cut(s) 1547
SchI GAGTC 9 cut(s) 59, 67, 149, 340, 952, 1095, 1136, 1668, 1809
ScrFI CCNGG 8 cut(s) 260, 560, 806, 875, 890, 891, 912, 948
SduI GDGCHC 4 cut(s) 282, 812, 1432, 1789
SfaNI GCATC 2 cut(s) 1125, 1402
SfcI CTRYAG 1 cut(s) 1780
SfoI GGCGCC 1 cut(s) 337
SfuI TTCGAA 1 cut(s) 800
SgrAI CRCCGGYG 1 cut(s) 548
SinI GGWCC 3 cut(s) 180, 573, 601
SmaI CCCGGG 1 cut(s) 891
SpeI ACTAGT 1 cut(s) 1898
Sse9I AATT 8 cut(s) 512, 567, 596, 763, 777, 901, 1073, 1598
SspDI GGCGCC 1 cut(s) 335
SspMI CTAG 5 cut(s) 1755, 1797, 1899, 1916, 2030
SstI GAGCTC 2 cut(s) 282, 1789
StyD4I CCNGG 8 cut(s) 258, 558, 804, 873, 888, 889, 910, 946
StyI CCWWGG 1 cut(s) 1606
TaaI ACNGT 6 cut(s) 16, 392, 506, 617, 739, 2098
TaiI ACGT 2 cut(s) 368, 1404
TasI AATT 8 cut(s) 512, 567, 596, 763, 777, 901, 1073, 1598
TatI WGTACW 2 cut(s) 1278, 2057
TauI GCSGC 7 cut(s) 304, 307, 774, 983, 986, 1338, 1364
TfiI GAWTC 8 cut(s) 8, 210, 253, 706, 1303, 1489, 1646, 2107
Tru1I TTAA 1 cut(s) 1547
Tru9I TTAA 1 cut(s) 1547
TscAI CASTG 2 cut(s) 19, 1459
TseFI GTSAC 2 cut(s) 366, 733
TseI GCWGC 3 cut(s) 1228, 1587, 2033
Tsp45I GTSAC 2 cut(s) 366, 733
TspGWI ACGGA 2 cut(s) 958, 1778
TspMI CCCGGG 1 cut(s) 889
TspRI CASTG 2 cut(s) 19, 1459
VpaK11BI GGWCC 3 cut(s) 180, 573, 601
XapI RAATTY 5 cut(s) 567, 777, 901, 1073, 1598
XcmI CCANNNNNNNNNTGG 1 cut(s) 1824
XmaI CCCGGG 1 cut(s) 889
XmiI GTMKAC 2 cut(s) 114, 1986
XspI CTAG 5 cut(s) 1755, 1797, 1899, 1916, 2030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.